prot_H-elongata_contig73502.15040.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73502.15040.1
Unique Nameprot_H-elongata_contig73502.15040.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length212
Homology
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BLAST of mRNA_H-elongata_contig73502.15040.1 vs. uniprot
Match: D7FIP9_ECTSI (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP9_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 1.200e-43
Identity = 104/205 (50.73%), Postives = 129/205 (62.93%), Query Frame = 0 
Query:    4 YIQPGKSAKQHQLRFVRPESRWKDVSCVKGFLTKKVLDQKRLENAIRNTATSQDNVGSVSPHSREAGGSERGAAVRVGAKRKDIKCAEEEEGEEAERTELEIATEAAVVRARGVGREARKELRLSISREQMGRSQLEYMAKAMMQVMCLNAKLLKGIKECRLRG-PPRNRRCQINSQALVNLRQERARLRRRVWQLEDEIEARGM 207
            + +PG+S K+ Q R+  PE RWKDVSCVK  LTKK  D +RLE AIRNT+      GS         G   G+   VG         EE +  E ERTELE+A EA VVR + VGR+ RKELR  +SR Q+G  Q+E  AK MM++M LNAKL +G+++CR RG PP  RR  +NS AL  +R E ARLRRRV +LEDE E RG+
Sbjct:  128 FKKPGRSVKE-QGRYQHPECRWKDVSCVKSLLTKKAYDLRRLEKAIRNTSAVAGPDGSPC-----GDGGRTGSVGAVGQ-------GEEGDAAEVERTELEVAAEATVVRGKSVGRQVRKELRQMMSRSQLGCWQVEQTAKLMMKIMRLNAKLAEGLRQCRARGGPPVLRRYNMNSPALAKVRLENARLRRRVRRLEDEAERRGL 319
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73502.15040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIP9_ECTSI1.200e-4350.73HSF_DOMAIN domain-containing protein n=2 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 181..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73502contigH-elongata_contig73502:1573..2992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73502.15040.1mRNA_H-elongata_contig73502.15040.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73502 1573..2992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73502.15040.1 ID=prot_H-elongata_contig73502.15040.1|Name=mRNA_H-elongata_contig73502.15040.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp
MCIYIQPGKSAKQHQLRFVRPESRWKDVSCVKGFLTKKVLDQKRLENAIR
NTATSQDNVGSVSPHSREAGGSERGAAVRVGAKRKDIKCAEEEEGEEAER
TELEIATEAAVVRARGVGREARKELRLSISREQMGRSQLEYMAKAMMQVM
CLNAKLLKGIKECRLRGPPRNRRCQINSQALVNLRQERARLRRRVWQLED
EIEARGMTPPP*
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