prot_H-elongata_contig7350.15039.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7350.15039.1
Unique Nameprot_H-elongata_contig7350.15039.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length404
Homology
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BLAST of mRNA_H-elongata_contig7350.15039.1 vs. uniprot
Match: D7FLJ7_ECTSI (Glycosyltransferase, family GT49 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ7_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 1.320e-135
Identity = 235/417 (56.35%), Postives = 283/417 (67.87%), Query Frame = 0 
Query:   36 AVETDRKI----CCP-NEFLPQFGHIYLVQQIR----KTLEIDMATRPLEGSTASSISPLATRMVLQHPDVSSMVTALRVSLAHAFYGTPPYMIPFKMYLPKNLQVPTPPLDQEVHKVQGLRSVFLAAWSLDPRASTAKAAAMGVVTQERIKNCEFTCGQTMHEAIDVGYVSGG-------DSACILALVRALRYNTFFTHLDLTSVNTSTLGAWSDDPFDDSSDVAGGPLAAATQAMLGWNVTLQSFIAPKLPRGSDGSSLLNWGAIGQALLVNPRPM--------------------------------IATWDLTECGIGDFGLKSLLPAWWRIFCFITPVRELRLADNGLGGVGLASFFNMMNGTGFVFSPTEGLQLPQGNLPAPNTSFLTCLELGGSNLRGGYSSLALLLSR 404
            AV+T R +    CCP + F P+ GH+YL++ I+    +TLEI MA+ P + +T   +  LAT M+LQ PD++ +V A+RV LAHA+YG P   +P  M LPK+L  P PP+DQ VH+  GLRSVFLA+WSLDPRA T +AAA G  T +RIK+ +FT GQ  + AIDVG+V+         D AC+LALVRAL+YNTFFTHLDL++ NTS    WS+DPF  S DVA GPLA A Q +L WNVTLQSF+AP LP G  GSSLLNW A+G ALLVNPRPM                                IATWDLT+CGIGD GL SLLPAWWRIF +I PVRELRL+ N LG  GLA FFNM+NGTGF FSP +GL +P G LPAPNTSF+TCLELGG +LRG   SL +LL R
Sbjct:   38 AVQTARILHASRCCPGSSFKPKVGHVYLLKHIKCPQLQTLEIGMASLPSDKNTL--LPQLATNMLLQRPDMAPIVMAIRVMLAHAYYGWPSMAVPCMMSLPKSLHTPLPPMDQAVHQSGGLRSVFLASWSLDPRAITDEAAAAGRSTADRIKDLQFTRGQPRYGAIDVGHVAATEKGSGQPDHACVLALVRALQYNTFFTHLDLSTTNTSAARCWSEDPFGPS-DVASGPLATAVQGLLRWNVTLQSFLAPNLPCGPGGSSLLNWAAMGSALLVNPRPMATTWDFSKVMIHAAPSHVAFTDHSLIRPVPAQIATWDLTDCGIGDAGLTSLLPAWWRIFSYIAPVRELRLSGNHLGQAGLAPFFNMLNGTGFAFSPPDGLSVPPGPLPAPNTSFVTCLELGGCDLRGAVPSLGMLLLR 451
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7350.15039.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLJ7_ECTSI1.320e-13556.35Glycosyltransferase, family GT49 n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 171..404
e-value: 3.1E-10
score: 41.0
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 331..349
e-value: 0.56
score: 10.4
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 204..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7350contigH-elongata_contig7350:3139..9773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7350.15039.1mRNA_H-elongata_contig7350.15039.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7350 3124..9773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7350.15039.1 ID=prot_H-elongata_contig7350.15039.1|Name=mRNA_H-elongata_contig7350.15039.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=404bp
MTWDLLHVRRCVYVTSPPEMLRQLCHFFVSRTHLVAVETDRKICCPNEFL
PQFGHIYLVQQIRKTLEIDMATRPLEGSTASSISPLATRMVLQHPDVSSM
VTALRVSLAHAFYGTPPYMIPFKMYLPKNLQVPTPPLDQEVHKVQGLRSV
FLAAWSLDPRASTAKAAAMGVVTQERIKNCEFTCGQTMHEAIDVGYVSGG
DSACILALVRALRYNTFFTHLDLTSVNTSTLGAWSDDPFDDSSDVAGGPL
AAATQAMLGWNVTLQSFIAPKLPRGSDGSSLLNWGAIGQALLVNPRPMIA
TWDLTECGIGDFGLKSLLPAWWRIFCFITPVRELRLADNGLGGVGLASFF
NMMNGTGFVFSPTEGLQLPQGNLPAPNTSFLTCLELGGSNLRGGYSSLAL
LLSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt