prot_H-elongata_contig73456.15034.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73456.15034.1
Unique Nameprot_H-elongata_contig73456.15034.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length195
Homology
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 187 bits (475), Expect = 2.110e-51
Identity = 93/188 (49.47%), Postives = 120/188 (63.83%), Query Frame = 0
Query:    8 IRKVNPQSAPGPSGLRHCHLQDVRDDDLEVDIARLSRTIFKSETLPPLFWALHTGANLSALGAKTRPVTCGDVFRRIIGGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFLPTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ 195
            IR+ NPQ +PGPSGLR   LQ     +L   IA+L   IF    LP  FW LHT ANLSA+G K RP+  GD+FRRI+GG  C  Y   LA HF+P+GQ+GV  PGG +L+     L   +G  +L++D +NAFNS+ R   LP LA ++P +  YA N+YAR+PPKLL+  D S   +I S+ GVQQ
Sbjct: 1167 IRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTD-SGMAVIPSATGVQQ 1353          
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 3.580e-47
Identity = 89/194 (45.88%), Postives = 115/194 (59.28%), Query Frame = 0
Query:    4 IGDAIRKVNPQSAPGPSGLRHCHLQDVRDDDLEVD-IARLSRTIFK-SETLPPLFWALHTGANLSALGAKTRPVTCGDVFRRIIGGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFLPTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ 195
            I   ++K NPQSAPGP GLR  +LQ     D   + +A  S  +F   + LP  FW LHT ANLSALG K RP+  G V RRII G+FC  Y   +A  F+   Q G   PGG++++     L   +G TILSFDGKNA+NS+ R   LP +AT  P +  Y  N+YAR   KLLF M++ +  ++ S RGVQQ
Sbjct:  125 IKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 318          
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.580e-45
Identity = 89/194 (45.88%), Postives = 115/194 (59.28%), Query Frame = 0
Query:    4 IGDAIRKVNPQSAPGPSGLRHCHLQDVRDDDLEVD-IARLSRTIFK-SETLPPLFWALHTGANLSALGAKTRPVTCGDVFRRIIGGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFLPTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ 195
            I   ++K NPQSAPGP GLR  +LQ     D   + +A  S  +F   + LP  FW LHT ANLSALG K RP+  G V RRII G+FC  Y   +A  F+   Q G   PGG++++     L   +G TILSFDGKNA+NS+ R   LP +AT  P +  Y  N+YAR   KLLF M++ +  ++ S RGVQQ
Sbjct:  125 IKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 318          
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 5.570e-45
Identity = 89/194 (45.88%), Postives = 114/194 (58.76%), Query Frame = 0
Query:    4 IGDAIRKVNPQSAPGPSGLRHCHLQ-DVRDDDLEVDIARLSRTIFK-SETLPPLFWALHTGANLSALGAKTRPVTCGDVFRRIIGGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFLPTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ 195
            I   ++K NPQSAPGP GLR  +LQ     D     +A  S  +F   + LP  FW LHT ANLSALG K RP+  G V RRII G+FC  Y   +A  F+   Q G   PGG++++     L   +G TILSFDGKNA+NS+ R   LP +AT  P +  Y  N+YAR   KLLF M++ +  ++ S RGVQQ
Sbjct:  125 IKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 318          
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 7.780e-45
Identity = 89/194 (45.88%), Postives = 115/194 (59.28%), Query Frame = 0
Query:    4 IGDAIRKVNPQSAPGPSGLRHCHLQDVRDDDLEVD-IARLSRTIFK-SETLPPLFWALHTGANLSALGAKTRPVTCGDVFRRIIGGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFLPTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ 195
            I   ++K NPQSAPGP GLR  +LQ     D   + +A  S  +F   + LP  FW LHT ANLSALG K RP+  G V RRII G+FC  Y   +A  F+   Q G   PGG++++     L   +G TILSFDGKNA+NS+ R   LP +AT  P +  Y  N+YAR   KLLF M++ +  ++ S RGVQQ
Sbjct:  125 IKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 318          
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 1.370e-37
Identity = 70/152 (46.05%), Postives = 93/152 (61.18%), Query Frame = 0
Query:   44 RTIFKSETLPPLFWALHTGANLSALGAKTRPVTCGDVFRRIIGGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFLPTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ 195
            +  +  + LP  FW LHT ANLSALG K RP+  G V RRII G+FC  Y   +A  F+   Q G   PGG++++     L   +G TILSFDGKNA+NS+ R   LP +AT  P ++ Y  N+YAR   KLLF M++ +  ++ S RGVQQ
Sbjct:   15 KVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 166          
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.580e-37
Identity = 72/164 (43.90%), Postives = 95/164 (57.93%), Query Frame = 0
Query:   33 DDLEVDIARLSRTIFK-SETLPPLFWALHTGANLSALGAKTRPVTCGDVFRRIIGGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFLPTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ 195
            DD    +A  S  +F   + LP LFW   T A+LSALG K RP+  G V RRII G+FC  Y + +A  F+   Q G   PGG++++     L   +G TILSFDG+NA+NSI R   L  +AT  P +  Y  NLYAR   KLLF M++ +  ++ S R VQQ
Sbjct:    3 DDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAKLLFKMEDGSIEMVRSQREVQQ 166          
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.680e-34
Identity = 68/152 (44.74%), Postives = 91/152 (59.87%), Query Frame = 0
Query:   44 RTIFKSETLPPLFWALHTGANLSALGAKTRPVTCGDVFRRIIGGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFLPTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ 195
            +  +  + LP   W LHT ANLSALG K RP+  G V RRII G+F   Y   +A  F+   Q G   PGG++++     L   +G TILSFDGKNA+NS+ R   LP +AT+ P +  Y  N+YAR   KLLF M++ +  ++ S RGVQQ
Sbjct:   15 KVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQ 166          
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A6H5KQE6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE6_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 6.090e-25
Identity = 56/135 (41.48%), Postives = 72/135 (53.33%), Query Frame = 0
Query:   33 DDLEVDIARLSRTIFK-SETLPPLFWALHTGANLSALGAKTRPVTCGDVFRRII------------GGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFLPTLA 154
            DD    +A  S  +F   + LP LFW LHT A+LSALG K RP+  G V RRII             G+FC  Y + +A  F+   Q G   PGG++++         +G TILSFDGKNA+NSI R   L  +A
Sbjct:    3 DDFSATLADFSHKVFYYGDELPDLFWGLHTSASLSALGEKKRPIAVGGVLRRIIXIXXXXXXXXXISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAAPSHQQGSTILSFDGKNAYNSILRSSILTAVA 137          
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Match: A0A812UIA4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UIA4_9DINO)

HSP 1 Score: 64.7 bits (156), Expect = 8.890e-9
Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 0
Query:    4 IGDAIRKVNPQSAPGPSGLRHCHLQDVRDDDLEVDIARLSRTIFKSETLPPLFWALHTGANLSALGAK---TRPVTCGDVFRRIIGGTFCSDYSKQLAGHFKPKGQHGVTCPGGIDLMPRAVR--LGFAEGCTILSFDGKNAFNSISRHEFLPTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ 195
            + DA+R     SA G SG      + + DD+  ++       +      PP+       + L+AL       R +  GDVFRR++       Y+ +L    +P  Q  +    G D +   +R  + F    T++S DG++A+++ISR   L  L+ VVP +  +A  +YAR     L+  D  T   I  + G++Q
Sbjct:  259 VADALRTSKRGSAAGLSGATVEFYKLLLDDEGALEAFTFVVNVAARAQAPPVALDALALSRLTALRKPQGGVRGIATGDVFRRLVSRALARAYAGELDEATRPF-QFALRTRAGTDSLAAMLRSAVEFDPRATVVSLDGRSAYDTISRAAILSKLSEVVPALLPFARAIYARTST-FLWWDDEGTLHEISQAEGIEQ 453          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73456.15034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN2.110e-5149.47Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KQ62_9PHAE3.580e-4745.88Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE1.580e-4545.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LN63_9PHAE5.570e-4545.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE7.780e-4545.88Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KSY9_9PHAE1.370e-3746.05Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L3H3_9PHAE1.580e-3743.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1H0_9PHAE1.680e-3444.74Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQE6_9PHAE6.090e-2541.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A812UIA4_9DINO8.890e-926.90Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73456contigH-elongata_contig73456:902..1486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73456.15034.1mRNA_H-elongata_contig73456.15034.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73456 902..1486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73456.15034.1 ID=prot_H-elongata_contig73456.15034.1|Name=mRNA_H-elongata_contig73456.15034.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
PSAIGDAIRKVNPQSAPGPSGLRHCHLQDVRDDDLEVDIARLSRTIFKSE
TLPPLFWALHTGANLSALGAKTRPVTCGDVFRRIIGGTFCSDYSKQLAGH
FKPKGQHGVTCPGGIDLMPRAVRLGFAEGCTILSFDGKNAFNSISRHEFL
PTLATVVPVVSGYAANLYARDPPKLLFAMDNSTKGIIDSSRGVQQ
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