mRNA_H-elongata_contig73422.15033.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: D7FYK6_ECTSI (Aminodeoxychorismate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYK6_ECTSI) HSP 1 Score: 236 bits (601), Expect = 1.920e-70 Identity = 126/172 (73.26%), Postives = 135/172 (78.49%), Query Frame = 1
Query: 1 LRSFHQEERSKQPSLFSVVRAVVDLFYYDADPQLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKEPCNS 516
L F QEERSKQPSLFSVVRA VDLFYY+ DPQLGLYGAFGYDLTFQFDSIPL HERD SQKDLLLY+PD MLVVDQ DKRDAW IEY+FAY G +T+GL R GEVV Y+P GD RDTP GDYAKKV+KAK+EFKVGNLFEVVLSQTFK+PC S
Sbjct: 139 LSPFSQEERSKQPSLFSVVRAAVDLFYYEGDPQLGLYGAFGYDLTFQFDSIPLKHERDGSQKDLLLYLPDKMLVVDQ---------DKRDAWSIEYDFAYGGATTEGLPREGEVVAYKP---SDKPGD-----RDTPPGDYAKKVDKAKQEFKVGNLFEVVLSQTFKKPCTS 293
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: A0A7R9ZU98_9STRA (Aminodeoxychorismate synthase n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZU98_9STRA) HSP 1 Score: 186 bits (473), Expect = 8.440e-52 Identity = 100/167 (59.88%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 7 SFHQEERSKQPSLFSVVRAVVDLF-YYDADPQLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKE 504
+F +EERS+QPSLFSVVR++VDLF Y D D QLGLYGAFGYDLTF F+ I L +RD Q+DLLLY+PD++ V+D SDKRDAW I+YEF G ST+GL RVG D++P+ + E ERDTP GD+AK V++AKEEFK+GNLFE VLSQTF+E
Sbjct: 224 TFSEEERSRQPSLFSVVRSLVDLFGYQDGDGQLGLYGAFGYDLTFSFEPIDLKQDRDPEQRDLLLYLPDSVYVID---------SDKRDAWHIQYEFNADGKSTQGLPRVGLEEDFKPYDEATT----EFIERDTPEGDFAKSVDRAKEEFKIGNLFEAVLSQTFRE 377
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: A0A835Z6A5_9STRA (Aminodeoxychorismate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A5_9STRA) HSP 1 Score: 184 bits (467), Expect = 2.680e-51 Identity = 100/164 (60.98%), Postives = 118/164 (71.95%), Query Frame = 1
Query: 19 EERSKQPSLFSVVRAVVDLFYYDADPQLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKEPC 510
EERS+QPSLFSVVR++V LF ++ DPQLGLYGAFGYDLTFQF+ I RD Q+D++LY+PD +LVVDQ DKRDAW I Y+FAY GVST GL R G EP+ + AE ERDTP G+YAKKVE A+EEF++GNLFE VLSQTF PC
Sbjct: 133 EERSRQPSLFSVVRSIVSLFSFEDDPQLGLYGAFGYDLTFQFEPIEQVLPRDADQRDIVLYLPDKLLVVDQ---------DKRDAWTISYDFAYGGVSTAGLPRGGA---REPYVAA-----AEAPERDTPQGEYAKKVEVAREEFRLGNLFETVLSQTFTAPC 279
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: A0A7S2KI33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KI33_9STRA) HSP 1 Score: 174 bits (440), Expect = 2.510e-50 Identity = 96/167 (57.49%), Postives = 118/167 (70.66%), Query Frame = 1
Query: 7 SFHQEERSKQPSLFSVVRAVVDLFYYD-ADPQLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKE 504
SF +EERS+QPSLFSVVR++VDLF YD D QLGLYGAFGYDLTFQF+ I L RDE Q+D+LLY+PD ++VVDQ DKRDAW I Y+F G ST+G+ R G + ++ + S G A + RDTP +++ VEKAK EF VGNLFE VLSQTF+E
Sbjct: 145 SFSEEERSRQPSLFSVVRSLVDLFGYDDGDNQLGLYGAFGYDLTFQFEPIKLHQLRDEKQRDILLYLPDEIVVVDQ---------DKRDAWTISYDFFVDGKSTQGMERGGSIEPFKAFDENSPAGKAF-TPRDTPESEFSASVEKAKHEFAVGNLFEAVLSQTFRE 301
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: W7TEM3_9STRA (Aminodeoxychorismate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEM3_9STRA) HSP 1 Score: 182 bits (462), Expect = 3.150e-50 Identity = 94/169 (55.62%), Postives = 124/169 (73.37%), Query Frame = 1
Query: 10 FHQEERSKQPSLFSVVRAVVDLFYYDADPQLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKEPCNS 516
F +EERS+QPS+FSV+R +VD F D DPQLGLYG FGYDLTFQF+ I L R ++Q+D++LY+PD +LVVDQ DKR AWR+EY+F++ G ST+GL R G V++Y R+A +A +RD+P G+YA++V AK++FKVGNLFEVVLSQTF + C S
Sbjct: 256 FPEEERSRQPSIFSVIRTLVDFFQSDGDPQLGLYGTFGYDLTFQFEPIKLRMPRSDNQRDVVLYLPDRVLVVDQ---------DKRAAWRVEYDFSWNGRSTQGLARTGRVLEY-----RAAPAEALKRDRDSPVGEYARRVAMAKDQFKVGNLFEVVLSQTFFKECPS 410
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: K0SCK3_THAOC (Aminodeoxychorismate synthase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SCK3_THAOC) HSP 1 Score: 179 bits (453), Expect = 5.250e-49 Identity = 94/175 (53.71%), Postives = 120/175 (68.57%), Query Frame = 1
Query: 7 SFHQEERSKQPSLFSVVRAVVDLFYYDADP----QLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKEPCNSR 519
SF +E+RS+QPSLFSVVRA+VDLF YD+D QLGLYGAFGYDLTFQF+ I L+ ERD +Q+DL LY+ D ++VVD +R AW + +F Y G ST+GL R G V + P+ + + ERDTP GD+ K V++AKEEFKVGNLFE VLSQTF++P +
Sbjct: 223 SFSEEDRSRQPSLFSVVRALVDLFGYDSDESGDLQLGLYGAFGYDLTFQFEPIKLSQERDPNQRDLQLYLADEIVVVDSSRN---------SAWTVSLDFEYGGRSTEGLPREGGDVPFRPYGDHPSNAGEDFEERDTPAGDFTKSVDRAKEEFKVGNLFETVLSQTFRKPLTEK 388
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: B7FRL0_PHATC (Aminodeoxychorismate synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRL0_PHATC) HSP 1 Score: 178 bits (452), Expect = 9.580e-49 Identity = 99/167 (59.28%), Postives = 121/167 (72.46%), Query Frame = 1
Query: 7 SFHQEERSKQPSLFSVVRAVVDLFYYDA-DPQLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKE 504
+F++EERS+QPSLFSVVRA+VDLF Y A D QLGLYGAFGYDLTFQF+ I L ERD Q+DLLLY+PDTMLVVDQ DKRDAWR+ Y+F ST+G+ R G ++ +++ + + ERDTP ++A V KAKEEFKVGNLFE VLSQTF+E
Sbjct: 225 TFNEEERSRQPSLFSVVRALVDLFSYQAGDRQLGLYGAFGYDLTFQFEPIDLAQERDSEQRDLLLYLPDTMLVVDQ---------DKRDAWRVCYDFNVDQKSTQGIPRTGTPQPFQAYATST-----DFVERDTPPSEFANSVLKAKEEFKVGNLFEAVLSQTFRE 377
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: A0A7S1YQY3_9STRA (Aminodeoxychorismate synthase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQY3_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.290e-48 Identity = 95/172 (55.23%), Postives = 122/172 (70.93%), Query Frame = 1
Query: 7 SFHQEERSKQPSLFSVVRAVVDLFYYDA-DPQLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKEPCNSR 519
+F +E+RS+QPSLFSVVRA+V+LF YD D QLGLYGAFGYDLTFQF+ I L RD +Q+DLLLY+PD ++VVDQ DK+DAW I Y+F ST+G+ RVG+ ++P+ A S RDTP +++K VEKAK EFKVGNLFE VLSQTF+E +++
Sbjct: 219 TFSEEDRSRQPSLFSVVRALVNLFGYDGGDRQLGLYGAFGYDLTFQFEPITLAQVRDITQRDLLLYLPDEIVVVDQ---------DKQDAWTISYDFCVDQKSTQGMPRVGDATPFQPFDENDAEAVENFSSRDTPRSEFSKSVEKAKYEFKVGNLFEAVLSQTFREKLDAQ 381
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: A0A7S2R582_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R582_9STRA) HSP 1 Score: 169 bits (428), Expect = 4.830e-47 Identity = 92/171 (53.80%), Postives = 119/171 (69.59%), Query Frame = 1
Query: 7 SFHQEERSKQPSLFSVVRAVVDLF-YYDADPQLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKEPCNS 516
SF++E+RS+QPSLFSVVR++VDLF Y D D QLGLYGAFGYD+TFQF+ I T ERD Q+D+LLY+PD + VVDQ DKRDAW I Y+F+ +T+GL R G ++ + G + RDTP +++K VEKAK EF +GNLFEVVLSQTF+E ++
Sbjct: 226 SFNEEDRSRQPSLFSVVRSLVDLFGYQDGDGQLGLYGAFGYDVTFQFEPIKKTQERDPEQRDILLYLPDEITVVDQ---------DKRDAWVISYDFSVNNKTTQGLPRGGSDAPFKHFQE----GKQKFQARDTPNSEFSKSVEKAKNEFAIGNLFEVVLSQTFREKLDA 383
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Match: A0A1E7FRX3_9STRA (Aminodeoxychorismate synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRX3_9STRA) HSP 1 Score: 172 bits (435), Expect = 1.330e-46 Identity = 94/167 (56.29%), Postives = 119/167 (71.26%), Query Frame = 1
Query: 7 SFHQEERSKQPSLFSVVRAVVDLF-YYDADPQLGLYGAFGYDLTFQFDSIPLTHERDESQKDLLLYIPDTMLVVDQARKPARAFSDKRDAWRIEYEFAYAGVSTKGLGRVGEVVDYEPWSSRSATGDAEGSERDTPGGDYAKKVEKAKEEFKVGNLFEVVLSQTFKE 504
+F +EERS+QPSLFSVVR++V+LF Y D D QLGLYGAFGYDLTF F+ I + ERD Q+DLLLY+PD++ V+D SDKRDAW ++YEF ST+GL RVG ++ + + E +RDTP G++A+ V KAKEEFKVGNLFE VLSQTF+E
Sbjct: 191 TFSEEERSRQPSLFSVVRSLVNLFGYQDGDGQLGLYGAFGYDLTFSFEPIDMKQERDPEQRDLLLYLPDSVYVID---------SDKRDAWHVQYEFCVDQKSTQGLPRVGLDDKFQSFDENKS----EFIKRDTPEGEFAESVYKAKEEFKVGNLFEAVLSQTFRE 344 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73422.15033.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig73422.15033.1 >prot_H-elongata_contig73422.15033.1 ID=prot_H-elongata_contig73422.15033.1|Name=mRNA_H-elongata_contig73422.15033.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp LRSFHQEERSKQPSLFSVVRAVVDLFYYDADPQLGLYGAFGYDLTFQFDSback to top mRNA from alignment at H-elongata_contig73422:743..2917- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig73422.15033.1 ID=mRNA_H-elongata_contig73422.15033.1|Name=mRNA_H-elongata_contig73422.15033.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2175bp|location=Sequence derived from alignment at H-elongata_contig73422:743..2917- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig73422:743..2917- >mRNA_H-elongata_contig73422.15033.1 ID=mRNA_H-elongata_contig73422.15033.1|Name=mRNA_H-elongata_contig73422.15033.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1044bp|location=Sequence derived from alignment at H-elongata_contig73422:743..2917- (Himanthalia elongata Himel1 dioecious)back to top |