prot_H-elongata_contig73378.15029.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73378.15029.1
Unique Nameprot_H-elongata_contig73378.15029.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
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BLAST of mRNA_H-elongata_contig73378.15029.1 vs. uniprot
Match: D7FNB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNB0_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 9.580e-29
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0 
Query:    6 RGANPKTRTSSGKTCLHFHKARPTVVRLLLPHLAVADVNAQDKWGNTPLHRCVCGETQDHLGECSL 71
            +GA+PK RT+S +  LHFHKARP V+RLLLP+L++ADVNAQDKWGNTPLHRC+CGE+QDHL    L
Sbjct:  101 KGADPKARTNSRQAVLHFHKARPEVIRLLLPYLSIADVNAQDKWGNTPLHRCICGESQDHLDALDL 166
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73378.15029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNB0_ECTSI9.580e-2971.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13637Ank_4coord: 29..58
e-value: 6.6E-5
score: 23.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..66
e-value: 4.2E-11
score: 44.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..60
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..55
score: 8.72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73378contigH-elongata_contig73378:21..714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73378.15029.1mRNA_H-elongata_contig73378.15029.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73378 21..714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73378.15029.1 ID=prot_H-elongata_contig73378.15029.1|Name=mRNA_H-elongata_contig73378.15029.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
MSLNYRGANPKTRTSSGKTCLHFHKARPTVVRLLLPHLAVADVNAQDKWG
NTPLHRCVCGETQDHLGECSLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom