prot_H-elongata_contig7335.15023.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7335.15023.1
Unique Nameprot_H-elongata_contig7335.15023.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
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BLAST of mRNA_H-elongata_contig7335.15023.1 vs. uniprot
Match: D7FNW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW2_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 3.750e-76
Identity = 117/169 (69.23%), Postives = 137/169 (81.07%), Query Frame = 0 
Query:    1 MKEYISDPSRIVYACWDRDYVTPMGDGLFRVGLKGQRFLTISIDMSVDIKFSAAPNGNVQCKSVGYSLDDMGKILGQRFVDTFSFELEGELRVEEKEAKVRALRLKNTLLSGDVALTIGGKMPSLLAATPEQLVKTACLGINQQVLGYVLRTFVGTVAGDYRQWARNVK 169
            M EYIS+PSRIVYACW+   +  MGDG+FR+  +GQ FL+ISIDMSVDI+   A +G +QCKSVGYS+DDM K+LGQ FVDTF  ELEG+LRVEE   KVRAL LKNT LSGDVA+TIGGKMP LL+ATPE LVK+A LGIN +VL YV  TFV TVAGDYR+W+R+ K
Sbjct:   52 MLEYISEPSRIVYACWEHKDIMDMGDGVFRMAFRGQSFLSISIDMSVDIQLWTAEDGTIQCKSVGYSVDDMAKLLGQEFVDTFFLELEGKLRVEETVTKVRALSLKNTRLSGDVAVTIGGKMPGLLSATPEPLVKSAALGINNKVLEYVSNTFVSTVAGDYRKWSRDQK 220
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BLAST of mRNA_H-elongata_contig7335.15023.1 vs. uniprot
Match: A0A6H5KG63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG63_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 4.620e-76
Identity = 117/167 (70.06%), Postives = 136/167 (81.44%), Query Frame = 0 
Query:    1 MKEYISDPSRIVYACWDRDYVTPMGDGLFRVGLKGQRFLTISIDMSVDIKFSAAPNGNVQCKSVGYSLDDMGKILGQRFVDTFSFELEGELRVEEKEAKVRALRLKNTLLSGDVALTIGGKMPSLLAATPEQLVKTACLGINQQVLGYVLRTFVGTVAGDYRQWARN 167
            M+ YISDPSRIVYACW+   +T MGDG+FR+  +GQ FL+ISIDMSVDI+   A +G +QCKSVGYS+DDM K+LGQ FVDTF  ELEGELRVEE   KVRAL LKNT L GDVA+TIGGKMP LL+ATPE LVK+A LGIN +VL YV  TFV TVAGDYR+W+R+
Sbjct:  113 MQAYISDPSRIVYACWEHKDITDMGDGVFRMAFRGQSFLSISIDMSVDIQLWTAEDGTIQCKSVGYSVDDMAKLLGQEFVDTFFLELEGELRVEETVTKVRALSLKNTRLGGDVAVTIGGKMPGLLSATPEPLVKSAALGINNKVLEYVSNTFVSTVAGDYREWSRD 279
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7335.15023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNW2_ECTSI3.750e-7669.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KG63_9PHAE4.620e-7670.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018971Protein of unknown function DUF1997PFAMPF09366DUF1997coord: 2..165
e-value: 1.4E-28
score: 100.0
NoneNo IPR availablePANTHERPTHR34133FAMILY NOT NAMEDcoord: 2..170
NoneNo IPR availablePANTHERPTHR34133:SF3coord: 2..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7335contigH-elongata_contig7335:484..1411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7335.15023.1mRNA_H-elongata_contig7335.15023.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7335 452..3319 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7335.15023.1 ID=prot_H-elongata_contig7335.15023.1|Name=mRNA_H-elongata_contig7335.15023.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
MKEYISDPSRIVYACWDRDYVTPMGDGLFRVGLKGQRFLTISIDMSVDIK
FSAAPNGNVQCKSVGYSLDDMGKILGQRFVDTFSFELEGELRVEEKEAKV
RALRLKNTLLSGDVALTIGGKMPSLLAATPEQLVKTACLGINQQVLGYVL
RTFVGTVAGDYRQWARNVKDEAAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018971DUF1997