prot_H-elongata_contig11949.1501.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig11949.1501.1
Unique Name	prot_H-elongata_contig11949.1501.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	102

Homology

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: A0A7S0STC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STC0_9STRA)

HSP 1 Score: 193 bits (491), Expect = 8.470e-59
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0

Query:   10 VDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            VDH+YD VVVGAGGAGLRAAMGCAEAGFKTAC+TKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV
Sbjct:   41 VDHDYDCVVVGAGGAGLRAAMGCAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 133

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: A0A2P4YK26_9STRA (Succinate dehydrogenase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YK26_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.360e-58
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0

Query:   10 VDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            VDHEYDAVVVGAGGAGLRAAMGCAEAG KTACI+KLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP AV
Sbjct:   47 VDHEYDAVVVGAGGAGLRAAMGCAEAGLKTACISKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPEAV 139

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: A0A6A5AM25_9STRA (FAD_binding_2 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AM25_9STRA)

HSP 1 Score: 191 bits (486), Expect = 6.450e-58
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0

Query:   10 VDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            VDHE+DAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAAL NMTEDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV
Sbjct:   29 VDHEFDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAV 121

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: A0A8H7UXE1_9FUNG (FAD_binding_2 domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UXE1_9FUNG)

HSP 1 Score: 184 bits (467), Expect = 1.190e-57
Identity = 87/95 (91.58%), Postives = 88/95 (92.63%), Query Frame = 0

Query:    8 PQVDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            P +DHEYDAVVVGAGGAGLRAA G AEAG  TACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP  V
Sbjct:   54 PIIDHEYDAVVVGAGGAGLRAAFGLAEAGLNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPHTV 148

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: A0A7S2YSM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSM3_9STRA)

HSP 1 Score: 187 bits (475), Expect = 9.400e-57
Identity = 87/93 (93.55%), Postives = 92/93 (98.92%), Query Frame = 0

Query:   10 VDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            VDHEYDAVVVGAGG+GLRAAMG +EAGFKTAC+TKLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP+AV
Sbjct:   37 VDHEYDAVVVGAGGSGLRAAMGLSEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPKAV 129

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: A0A7S1ZM11_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZM11_TRICV)

HSP 1 Score: 184 bits (467), Expect = 4.990e-56
Identity = 85/93 (91.40%), Postives = 91/93 (97.85%), Query Frame = 0

Query:   10 VDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            VDHEYDAVVVGAGGAGLRAAMG +EAGF+TAC++KLFPTRSHTVAAQGG+NAALGNM+EDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP AV
Sbjct:   43 VDHEYDAVVVGAGGAGLRAAMGLSEAGFRTACVSKLFPTRSHTVAAQGGVNAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPAAV 135

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: W4H7S1_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=10 Tax=Saprolegniaceae TaxID=4764 RepID=W4H7S1_9STRA)

HSP 1 Score: 191 bits (486), Expect = 7.250e-56
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0

Query:   10 VDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            VDHE+DAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAAL NMTEDDWRWHMYDTVKGSDWLGDQDAIHYMC+EAPRAV
Sbjct:   29 VDHEFDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALANMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAV 121

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: A0A8H7UZ46_9FUNG (Uncharacterized protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7UZ46_9FUNG)

HSP 1 Score: 185 bits (469), Expect = 1.020e-55
Identity = 88/97 (90.72%), Postives = 88/97 (90.72%), Query Frame = 0

Query:    6 NAPQVDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            N P  DHEYDAVVVG GGAGLRAA G AEAGF TACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAP  V
Sbjct:  206 NYPIFDHEYDAVVVGTGGAGLRAAFGLAEAGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPHTV 302

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: A0A8H6XD98_9AGAR (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6XD98_9AGAR)

HSP 1 Score: 191 bits (485), Expect = 1.190e-55
Identity = 89/101 (88.12%), Postives = 92/101 (91.09%), Query Frame = 0

Query:    2 WGQQNAPQVDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            W     P ++HEYDA+VVGAGGAGLRAA G AEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPR V
Sbjct:   39 WASGKYPLIEHEYDAIVVGAGGAGLRAAFGLAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRTV 139

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BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Match: A0A7S1XYN2_9STRA (Succinate dehydrogenase (quinone) (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYN2_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.310e-55
Identity = 88/93 (94.62%), Postives = 91/93 (97.85%), Query Frame = 0

Query:   10 VDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 102
            VDHE+DAVVVGAGGAGLRAAMG +E GFKTAC+TKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV
Sbjct:   19 VDHEFDAVVVGAGGAGLRAAMGLSEHGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAV 111

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot

BLAST of mRNA_H-elongata_contig11949.1501.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S0STC0_9STRA	8.470e-59	96.77	Hypothetical protein (Fragment) n=1 Tax=Chromulina...	[more]
A0A2P4YK26_9STRA	3.360e-58	95.70	Succinate dehydrogenase (Fragment) n=1 Tax=Phytoph...	[more]
A0A6A5AM25_9STRA	6.450e-58	96.77	FAD_binding_2 domain-containing protein (Fragment)...	[more]
A0A8H7UXE1_9FUNG	1.190e-57	91.58	FAD_binding_2 domain-containing protein n=1 Tax=Mu...	[more]
A0A7S2YSM3_9STRA	9.400e-57	93.55	Hypothetical protein (Fragment) n=1 Tax=Amphiprora...	[more]
A0A7S1ZM11_TRICV	4.990e-56	91.40	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
W4H7S1_9STRA	7.250e-56	96.77	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A8H7UZ46_9FUNG	1.020e-55	90.72	Uncharacterized protein n=1 Tax=Mucor plumbeus Tax...	[more]
A0A8H6XD98_9AGAR	1.190e-55	88.12	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A7S1XYN2_9STRA	1.310e-55	94.62	Succinate dehydrogenase (quinone) (Fragment) n=1 T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003953	FAD-dependent oxidoreductase 2, FAD binding domain	PFAM	PF00890	FAD_binding_2	coord: 15..102 e-value: 5.2E-30 score: 104.9
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 3..102 e-value: 4.3E-43 score: 149.4
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 7..101
None	No IPR available	PANTHER	PTHR11632	SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT	coord: 9..102
None	No IPR available	PANTHER	PTHR11632:SF76		coord: 9..102
IPR003952	Fumarate reductase/succinate dehydrogenase, FAD-binding site	PROSITE	PS00504	FRD_SDH_FAD_BINDING	coord: 49..58

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig11949	contig	H-elongata_contig11949:59..1081 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig11949.1501.1	mRNA_H-elongata_contig11949.1501.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig11949 59..1081 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig11949.1501.1 ID=prot_H-elongata_contig11949.1501.1|Name=mRNA_H-elongata_contig11949.1501.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
GWGQQNAPQVDHEYDAVVVGAGGAGLRAAMGCAEAGFKTACITKLFPTRS
HTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPR
AV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003953	FAD-binding_2
IPR036188	FAD/NAD-bd_sf
IPR003952	FRD_SDH_FAD_BS