prot_H-elongata_contig73294.15010.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73294.15010.1
Unique Nameprot_H-elongata_contig73294.15010.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length412
Homology
BLAST of mRNA_H-elongata_contig73294.15010.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 6.810e-121
Identity = 197/427 (46.14%), Postives = 252/427 (59.02%), Query Frame = 0
Query:    1 YVSPSRSPFSNQQEVNTKFTADSADVDTALAFLAPTRVVWHQEQAGIIPNACPDETNSPGNGAGDNGGDWWQFESLSHPSMETICCCYAYQGYKPEASRNLFWQLYKSRAAYRMALDEEE--SRGFVYDWVVRARFDVAWVRPIPSVRLFPQETVYFQAHYWPMSDHFALVPRAFADRFFSAVAAFYACDGASWPPPRSWWQPDCHGMGFEESVLFRRLHAVGVPYRFYAMFEYVVARGARGGVCTLGASDYVHACDIARLSGFFRDVLSGQDCISTLAEWANLRCRALFSVGGEKDPQRVNAIVDRNPAAWET------------AVVQNTPAERMVAG-SADTALNTPPPTFEDIHGIRLRLATLRDSIMAYPSPMLNDGVFRSNGGSSLGKDEDVRGGEGNRWSGFDTPPQWWVFSPNGCPLAE 412
            YV+   +    +Q  N +FT +S+DV+ ALA L PTR++WHQ+QAGIIPN C    N              + ++  H +       Y  Q Y PEASR+L+WQLYKS AAYRMAL EE+    GF YDWV+R R DVAW RP+P +R F ++ V+F  HYWPMSDHFALVPR F+DRFFSAV  FYACDG SWPPP SWWQP+C  +GFEESVLFR LHA  +PYRFY +F++++ RG  GGVC LG   Y   C +  L    +   S   C+  LAE+++LRCR LF   G +D +RV+AI+D  P AWE             AV    P  R   G S+D ++ T     ED+   RL+L  LRD++ A PSP+               ++E       +RW G+ T P WW+ S  GCPLAE
Sbjct:   39 YVTREDTVVKAKQVENPEFTPNSSDVEVALAVLEPTRLLWHQDQAGIIPNGCAGVNN--------------RTDASRHSARHLW---YWEQRYSPEASRSLYWQLYKSLAAYRMALREEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIGFEESVLFRHLHASEIPYRFYPLFDFIITRGVIGGVCKLGFIVYSEVCSLLGLWNALQPPFSRDHCLEALAEYSDLRCRTLFPARGMEDERRVDAILDPEPRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSSDASIYTSVAKAEDVDSARLKLVLLRDALQA-PSPLEPHYEMAL-------REEAKERSLLDRWGGWKTHPLWWIHSIMGCPLAE 440          
BLAST of mRNA_H-elongata_contig73294.15010.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 2.480e-61
Identity = 163/522 (31.23%), Postives = 216/522 (41.38%), Query Frame = 0
Query:   25 DVDTALAFLAPTRVVWHQEQAGIIPNACPDETNSPGNGAGDN---------------------GGDWWQFESLSHPSMETICCCYAYQGYKPEA-------SRNLFWQLYKSRAAYRMALDEEESR-------------GFVYDWVVRARFDVAWVRPIPSVRLFPQETVYFQAHYWPMSDHFALVPRAFADRFFSAVAAFYACD---GASWPPPRSWWQPDC-----------------------------------------------------HGMGFEESVLFRRLHAVGVPYRFYAMFEYVV-------------ARGARGGVCTLGASDYVHACDIARLSGFFRDVLSGQDCISTLAEWANLRCRA---LFSVGGEKDPQRVNAIVDRNPAAWETAVVQNTPAERMVA-GSADTALNTPPPTFEDIHGIRLRLATLRDSIMAYPSPMLNDGVFRSNGGSSLGKDEDVRGGEGNRWS-------GFDTPPQ-------------WWVFSPNGCPLAE 412
            +++  + FL+PT++VWHQEQAGIIPN+C     +P  G GD                      GGD    +   H S E           KP +       S   +WQLY+S AAYR+A+  E+ +                YDW+V  RFDVAW + +PS R F ++ V+F A  WPMS +FALVPRAF+DRFFSAV AF+ACD   G SWPP  +WWQPDC                                                      G GF ES+++R LHA GVPYR Y MFEY               A G     C     DY   C +    G F    + ++C + L+EW++L CR    L + G     +R +  +D +   W  + V   P E     G    A        ED+      LA LRD+++       +DG      GSS   +ED   GE +R +         D  P+             W V S  GC L E
Sbjct:  100 NIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEAQPSSFAESSVPNARPTGGNVGGDNRSNQPRGHASKEPS---------KPPSREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKKSLPSFRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEHGQENGNSSGNVHSGGNLHHSPRSGPAGGGGGFELRGSDDGSIFHDNRGGGRGEGFGESIVYRHLHASGVPYRPYPMFEYYTVPPYVRDGDADGDAAGDTRSGCETSTPDYFTGCVLLGTVGLFSQAYTSEECATALSEWSSLHCRTSTHLEATGPGHQTERGSENLDPDLTTWPRSSVGVYPDETETDNGDVLGAAEADRVQEEDLRRAWFNLAALRDAVIV----AADDGSEEVMHGSSNAGEEDTPSGETSRRNLGKEDGGDHDAAPKPSGSSPTRQTNRSWSVHSQGGCRLNE 608          
BLAST of mRNA_H-elongata_contig73294.15010.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 4.530e-60
Identity = 159/522 (30.46%), Postives = 214/522 (41.00%), Query Frame = 0
Query:   25 DVDTALAFLAPTRVVWHQEQAGIIPNACPDETNSPGNGAGDN---------------------GGDWWQFESLSHPSMETICCCYAYQGYKPEA-------SRNLFWQLYKSRAAYRMALDEEESR-------------GFVYDWVVRARFDVAWVRPIPSVRLFPQETVYFQAHYWPMSDHFALVPRAFADRFFSAVAAFYACD---GASWPPPRSWWQPDC-----------------------------------------------------HGMGFEESVLFRRLHAVGVPYRFYAMFEYVV--------------ARGARGGVCTLGASDYVHACDIARLSGFFRDVLSGQDCISTLAEWANLRCRALF---SVGGEKDPQRVNAIVDRNPAAWETAVVQNTPAERMV-AGSADTALNTPPPTFEDIHGIRLRLATLRDSIMAYPSPMLNDGVFRSNGGSSLGKDEDVRGGEGNRWSGFD-------------------TPPQWWVFSPNGCPLAE 412
            +++  + FL+PT++VWHQEQAGIIPN+C     +P  G GD                      GGD    +   H S E           KP         S   +WQLY+S AAYR+A+  E+ +                YDW+V  RFDVAW   +PS+R F ++ V+F A  WPMS +FALVPRAF+DRFFSAV AF+ACD   G SWPP  +WWQPDC                                                      G GF ES+++R LHA GVPYR Y MFEY                AR  R G C    SDY+  C +    G F    + + C + L+EW++L CRA     +    +  +R +  ++    AW  + V  +  E     G             ED+      L  LRD+++       +D    ++G S+ G+D+        R  G D                   T   W V S  GC L E
Sbjct:   99 NIEATMEFLSPTQLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRGHVSKEPS---------KPPGREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEDGQENENGSGSVHSGGNLHHSPRGGPAGGGGDFDLRDWDDGSIFHDNRGGSRGEGFGESIVYRHLHASGVPYRPYPMFEYYAVPPYVRDGDVDGGAARDTRSG-CEASTSDYLTGCVLLGTVGLFSPAYTSEACATALSEWSSLHCRASTQPEATSTGRQTERASKNLNPYLKAWPRSSVGVSSGEAKTHRGDVFGTAEEDRVQEEDLKRAWSNLVALRDAVILAAD---DDSEEATHGSSNAGEDDTPIREASRRHLGKDDGGDHDAAPKPSNSSPTRQTNRSWSVHSQWGCRLNE 607          
BLAST of mRNA_H-elongata_contig73294.15010.1 vs. uniprot
Match: A0A7S2WMN0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMN0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 6.330e-6
Identity = 38/123 (30.89%), Postives = 56/123 (45.53%), Query Frame = 0
Query:  114 MALDEEESRGFVYDWVVRARFDVAWVRPIPSVRLFPQETVYFQAHYWPMSDHFALVPRAFADRFFSAVAAFYACDGASWPPPRSWWQPDCH---------GMGFEESVLFRRLHAVGVPYRFY 227
            + L EE  R   Y WV+R RFD++++ P+P +    ++ V+      P+SD FA+VPRA+ D +F A      C           W+  CH         G G  E VL   L A   P + +
Sbjct:    9 LVLREERLRQQDYHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDL---C-----------WRGACHRWRARDFPKGAGSTELVLLAALRAAEAPVQLH 117          
BLAST of mRNA_H-elongata_contig73294.15010.1 vs. uniprot
Match: A0A7S2WLT0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLT0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.260e-5
Identity = 38/123 (30.89%), Postives = 56/123 (45.53%), Query Frame = 0
Query:  114 MALDEEESRGFVYDWVVRARFDVAWVRPIPSVRLFPQETVYFQAHYWPMSDHFALVPRAFADRFFSAVAAFYACDGASWPPPRSWWQPDCH---------GMGFEESVLFRRLHAVGVPYRFY 227
            + L EE  R   Y WV+R RFD++++ P+P +    ++ V+      P+SD FA+VPRA+ D +F A      C           W+  CH         G G  E VL   L A   P + +
Sbjct:  629 LVLREERLRQQDYHWVIRTRFDLSYLVPLPPLASLSRKAVHVPYSSLPISDTFAVVPRAYVDAYFMASDL---C-----------WRGACHRWRARDFPKGAGSTELVLLAALRAAEAPVQLH 737          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73294.15010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FK46_ECTSI6.810e-12146.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5E2_ECTSI2.480e-6131.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVJ6_9PHAE4.530e-6030.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WMN0_9STRA6.330e-630.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2WLT0_9STRA1.260e-530.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73294contigH-elongata_contig73294:83..2993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73294.15010.1mRNA_H-elongata_contig73294.15010.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73294 83..2993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73294.15010.1 ID=prot_H-elongata_contig73294.15010.1|Name=mRNA_H-elongata_contig73294.15010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=412bp
YVSPSRSPFSNQQEVNTKFTADSADVDTALAFLAPTRVVWHQEQAGIIPN
ACPDETNSPGNGAGDNGGDWWQFESLSHPSMETICCCYAYQGYKPEASRN
LFWQLYKSRAAYRMALDEEESRGFVYDWVVRARFDVAWVRPIPSVRLFPQ
ETVYFQAHYWPMSDHFALVPRAFADRFFSAVAAFYACDGASWPPPRSWWQ
PDCHGMGFEESVLFRRLHAVGVPYRFYAMFEYVVARGARGGVCTLGASDY
VHACDIARLSGFFRDVLSGQDCISTLAEWANLRCRALFSVGGEKDPQRVN
AIVDRNPAAWETAVVQNTPAERMVAGSADTALNTPPPTFEDIHGIRLRLA
TLRDSIMAYPSPMLNDGVFRSNGGSSLGKDEDVRGGEGNRWSGFDTPPQW
WVFSPNGCPLAE
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