prot_H-elongata_contig73279.15007.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73279.15007.1
Unique Nameprot_H-elongata_contig73279.15007.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length178
Homology
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: A0A6H5JF33_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF33_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 5.090e-110
Identity = 164/178 (92.13%), Postives = 173/178 (97.19%), Query Frame = 0
Query:    1 QDLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEFDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWVCEGGGKVS 178
            QDLRFKVDTDTRVAIVGPNGVGKSTLL LLSGKLEP++GEVTRHRHLRIGRYDQHFHELLP  KSPC+FLRSE+DVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMS PH+LLLDEPTNHLDMESVDALIRGIQEY+GGVVLVSHDARLIA+T CELWVCEGGG+V+
Sbjct:  371 QDLRFKVDTDTRVAIVGPNGVGKSTLLNLLSGKLEPSSGEVTRHRHLRIGRYDQHFHELLPQGKSPCDFLRSEYDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSQPHILLLDEPTNHLDMESVDALIRGIQEYKGGVVLVSHDARLIAATECELWVCEGGGRVN 548          
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: D8LEI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI0_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 3.970e-107
Identity = 164/178 (92.13%), Postives = 173/178 (97.19%), Query Frame = 0
Query:    1 QDLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEFDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWVCEGGGKVS 178
            QDLRFKVDTDTRVAIVGPNGVGKSTLL LLSGKLEP++GEVTRHRHLRIGRYDQHFHELLP  KSPC+FLRSE+DVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMS PH+LLLDEPTNHLDMESVDALIRGIQEY+GGVVLVSHDARLIA+T CELWVCEGGG+V+
Sbjct:  663 QDLRFKVDTDTRVAIVGPNGVGKSTLLNLLSGKLEPSSGEVTRHRHLRIGRYDQHFHELLPQGKSPCDFLRSEYDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSQPHILLLDEPTNHLDMESVDALIRGIQEYKGGVVLVSHDARLIAATECELWVCEGGGRVN 840          
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: A0A7S2RHT7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHT7_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.450e-82
Identity = 124/173 (71.68%), Postives = 144/173 (83.24%), Query Frame = 0
Query:    1 QDLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEFDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWVCEG 173
            +DLRFKVDT +R+AIVG NG GK+TLL LL+G+LEPT GEV+ HRHL IGRYDQHF ELLP  K+P EFL SE+ +PEQ+ARK LG FGLDG RHLI I  LSGGQKARVVFASL++  PH+L LDEPTNHLDMESV AL+ G++ +QGGVVL+SHDARLI+    ELWVCEG
Sbjct:   49 RDLRFKVDTSSRIAIVGANGSGKTTLLKLLTGQLEPTQGEVSHHRHLVIGRYDQHFEELLPFTKTPVEFLCSEYGLPEQEARKFLGMFGLDGTRHLIRIEALSGGQKARVVFASLALQAPHILCLDEPTNHLDMESVQALVDGLRAFQGGVVLISHDARLISELEMELWVCEG 221          
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: Q3U6P1_MOUSE (ABC transporter domain-containing protein (Fragment) n=1 Tax=Mus musculus TaxID=10090 RepID=Q3U6P1_MOUSE)

HSP 1 Score: 204 bits (518), Expect = 4.290e-63
Identity = 98/172 (56.98%), Postives = 131/172 (76.16%), Query Frame = 0
Query:    1 QDLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEFDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWVCE 172
            ++L F +D D+R+ IVGPNGVGKSTLL LL+GKL PT GE+ ++  L+IG ++Q + E L +E++P E+L+  F++P Q ARK LG+FGL+   H I I +LSGGQKARVVFA L+   P VL+LDEPTN+LD+ES+DAL   I +Y+G V++VSHDARLI  T C+LWV E
Sbjct:   50 KNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETPTEYLQRSFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAINDYKGAVIVVSHDARLITETNCQLWVVE 221          
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: A0A0D2WQE0_CAPO3 (ATP-binding cassette sub-family F member 1 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WQE0_CAPO3)

HSP 1 Score: 218 bits (555), Expect = 1.830e-62
Identity = 103/171 (60.23%), Postives = 131/171 (76.61%), Query Frame = 0
Query:    2 DLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEFDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWVCE 172
            D+   V  DTR+ IVGPNGVGKSTLL L+ G+L PT GEV R+R LRIGRY+QHF ++LP++ SP E+L + F+   +Q R  LG+FGL    H IPI +LSGGQKARVVFA+L    PH+L  DEPTNHLD+ES+DAL+  I++++GGVV+VSHDARLI  T C+LWVC+
Sbjct: 1107 DVNMGVTMDTRMCIVGPNGVGKSTLLNLIIGELNPTEGEVRRNRKLRIGRYNQHFVDVLPMDISPTEYLMNTFNKVNEQCRAQLGRFGLVSHAHTIPIRDLSGGQKARVVFAALVFQEPHILFFDEPTNHLDIESIDALVEAIEQFKGGVVVVSHDARLITETECQLWVCD 1277          
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: UPI00080A456E (ATP-binding cassette sub-family F member 1 n=1 Tax=Cebus imitator TaxID=2715852 RepID=UPI00080A456E)

HSP 1 Score: 203 bits (517), Expect = 6.920e-62
Identity = 99/172 (57.56%), Postives = 131/172 (76.16%), Query Frame = 0
Query:    1 QDLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEFDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWVCE 172
            ++L F +D D+R+ IVGPNGVGKSTLL LL+GKL PT GE+ ++  L+IG ++Q + E L +E++P E+L+  F++P Q ARK LG+FGL+   H I I +LSGGQKARVVFA L+   P VL+LDEPTN+LD+ES+DAL   I EY+G V++VSHDARLI  T C+LWV E
Sbjct:  133 KNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTHGEMRKNHRLKIGFFNQQYAEQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELACQKPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVE 304          
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: A0A1I8JDY1_9PLAT (ABC transporter domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8JDY1_9PLAT)

HSP 1 Score: 200 bits (509), Expect = 1.120e-61
Identity = 100/171 (58.48%), Postives = 125/171 (73.10%), Query Frame = 0
Query:    2 DLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEFDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWVCE 172
            DL F VD  +R++IVGPNGVGKSTLL +LSG+LEPT GE   +   RIG+YDQH  + L +E +P EFLRS F++  Q ARK LG+FGL+   H I +  LSGGQ++RV FA LS   P +L+LDEPTN+LD+ES+DAL   I E++GGVV+VSHD RLI  T C LWV E
Sbjct:   86 DLNFGVDMQSRISIVGPNGVGKSTLLKMLSGELEPTRGERRLNHRARIGKYDQHSGDQLDMEATPVEFLRSLFNLQYQDARKTLGRFGLESHAHEIKMKLLSGGQRSRVAFALLSCRAPDILILDEPTNNLDIESIDALAEAINEFEGGVVIVSHDERLIRDTDCRLWVVE 256          
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: A0A0J7NWI1_LASNI (Atp-binding cassette sub-family f member 2 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NWI1_LASNI)

HSP 1 Score: 198 bits (504), Expect = 2.700e-61
Identity = 97/176 (55.11%), Postives = 129/176 (73.30%), Query Frame = 0
Query:    1 QDLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEF-DVPE-QQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWVCEGG 174
            ++L F +D DTR+A+VGPNG GKSTLL LL G L PT+G + ++ HLRIGRY QH HELL L+ SP +++   F +V E ++ RK++G++GL G + + PI +LS GQ+ RVVFA L+   PH+LL DEPTNHLDME++DAL   I ++ GG+VLVSHD RLI     E+WVCE G
Sbjct:   18 KNLEFGIDLDTRLALVGPNGAGKSTLLKLLYGDLVPTSGMIRKNSHLRIGRYHQHLHELLDLDVSPLDYMMKAFPEVKEREEMRKIIGRYGLTGRQQICPIRQLSDGQRCRVVFAWLAWQVPHLLLFDEPTNHLDMETIDALADAINDFDGGMVLVSHDFRLINQVAEEIWVCENG 193          
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: A0A812VCJ4_9DINO (ABCF1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VCJ4_9DINO)

HSP 1 Score: 212 bits (540), Expect = 3.150e-61
Identity = 100/173 (57.80%), Postives = 133/173 (76.88%), Query Frame = 0
Query:    1 QDLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEFDVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWVCEG 173
            +D+   +D  +RVAIVGPNGVGKSTLL L+ G LEPT GE+ R+R LRIG+Y+QHF ++LP++++P ++L+   D   Q++R +LG+FGL+   H I +++LSGGQKARVVFASLS    H+L +DEPTNHLD+ES+DAL   I  +QGGV+LVSHDARLI +T C LWV  G
Sbjct:  582 KDVSLGIDQSSRVAIVGPNGVGKSTLLNLIMGDLEPTEGEIHRNRFLRIGKYNQHFVDVLPMDETPVQYLQRMHDTKYQESRMMLGRFGLESHAHEIKVSDLSGGQKARVVFASLSKQDSHILFMDEPTNHLDIESIDALADAIGAFQGGVILVSHDARLIEATDCRLWVISG 754          
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Match: W7TNJ5_9STRA (Atp-binding cassette sub-family f member 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNJ5_9STRA)

HSP 1 Score: 209 bits (532), Expect = 4.600e-61
Identity = 102/169 (60.36%), Postives = 129/169 (76.33%), Query Frame = 0
Query:    3 LRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIGRYDQHFHELLPLEKSPCEFLRSEF-DVPEQQARKVLGQFGLDGARHLIPIAELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGGVVLVSHDARLIASTGCELWV 170
            L F +D D+R+ IVGPNG GKSTLL L++G LEPT GE+ R+  LR+G Y+QHF + LP++KSP E+LRS F D   Q  R VLG++GL G  H IPI +LSGGQKARVVF  LS+  PH+L LDEPTN+LD+E++DAL   I E+ GGVVLVSHDARLI ++GC +W+
Sbjct:  428 LNFGMDLDSRICIVGPNGSGKSTLLKLVTGALEPTKGEIRRNSKLRMGIYNQHFVDRLPMDKSPIEYLRSLFPDETYQSVRNVLGRYGLQGHAHEIPIRDLSGGQKARVVFVELSLMAPHILFLDEPTNNLDIETIDALCEAINEFNGGVVLVSHDARLIEASGCRVWI 596          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73279.15007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF33_9PHAE5.090e-11092.13ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LEI0_ECTSI3.970e-10792.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RHT7_9STRA2.450e-8271.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
Q3U6P1_MOUSE4.290e-6356.98ABC transporter domain-containing protein (Fragmen... [more]
A0A0D2WQE0_CAPO31.830e-6260.23ATP-binding cassette sub-family F member 1 n=1 Tax... [more]
UPI00080A456E6.920e-6257.56ATP-binding cassette sub-family F member 1 n=1 Tax... [more]
A0A1I8JDY1_9PLAT1.120e-6158.48ABC transporter domain-containing protein n=1 Tax=... [more]
A0A0J7NWI1_LASNI2.700e-6155.11Atp-binding cassette sub-family f member 2 n=1 Tax... [more]
A0A812VCJ4_9DINO3.150e-6157.80ABCF1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
W7TNJ5_9STRA4.600e-6160.36Atp-binding cassette sub-family f member 1 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 9..175
e-value: 4.8E-11
score: 52.7
NoneNo IPR availableGENE3D3.40.50.300coord: 2..75
e-value: 5.0E-17
score: 64.2
coord: 79..174
e-value: 3.0E-26
score: 94.5
NoneNo IPR availablePANTHERPTHR19211ATP-BINDING TRANSPORT PROTEIN-RELATEDcoord: 2..174
NoneNo IPR availablePANTHERPTHR19211:SF14ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 1coord: 2..174
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 2..130
e-value: 8.8E-24
score: 84.6
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 1..177
score: 9.171
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 102..116
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73279contigH-elongata_contig73279:360..2851 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73279.15007.1mRNA_H-elongata_contig73279.15007.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73279 360..2851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73279.15007.1 ID=prot_H-elongata_contig73279.15007.1|Name=mRNA_H-elongata_contig73279.15007.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=178bp
QDLRFKVDTDTRVAIVGPNGVGKSTLLGLLSGKLEPTTGEVTRHRHLRIG
RYDQHFHELLPLEKSPCEFLRSEFDVPEQQARKVLGQFGLDGARHLIPIA
ELSGGQKARVVFASLSMSHPHVLLLDEPTNHLDMESVDALIRGIQEYQGG
VVLVSHDARLIASTGCELWVCEGGGKVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase