mRNA_H-elongata_contig100109.15.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig100109.15.1
Unique NamemRNA_H-elongata_contig100109.15.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A6H5KLV6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV6_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 1.440e-85
Identity = 179/386 (46.37%), Postives = 211/386 (54.66%), Query Frame = 1
Query:   16 SSLSAELLMPLEHFHGPTFHALLNEYRATNGRGVEKEAEAGGEGGLGAEDDGG-------------------------------ELTNCASADVTGTSTISRTGDIGSGXXXXXXXXXXSTPSLPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALE-------------RGGS-----------------------------------------------GG--------PKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRSVRV 876
            SS SAE +MP +HFHGPTFHALLNEYR  N                                                      +  N   AD  G  T  +  D  S           +   LPIDAYREEIL HVRNNRVTVIHGETGSGKS+R+P+ML+E+AL+             R G+                                               GG         +PRMFVSQPRRAATRAL +RVR +++R G  + V +RLGHGVREGPPKAEVTFATTGY+ RL+A++PG+LDSHTHLIIDEVHERSVDTDLLC FAKRL+ THPTLRLIVMSAT+SA L++ YYG+  PPLFVG++RFP+R V V
Sbjct:  526 SSCSAEFIMPRDHFHGPTFHALLNEYREENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDRGNTGGADAAGGMT--QPNDASS------PPVVDAAVPLPIDAYREEILEHVRNNRVTVIHGETGSGKSTRIPVMLVEEALDLIAEEAAAVAEAVREGAXXXXXXXXXXXXXXXXXXKNXXXXXXEAGVXXXXXXXXXXXXAESPAGGIAAAAPQVKRPRMFVSQPRRAATRALVERVRQEAERSGRGWSVGLRLGHGVREGPPKAEVTFATTGYLARLLASNPGVLDSHTHLIIDEVHERSVDTDLLCLFAKRLVETHPTLRLIVMSATLSANLLSKYYGLTSPPLFVGSRRFPVRQVYV 903          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: D8LSM0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM0_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 1.640e-79
Identity = 148/265 (55.85%), Postives = 173/265 (65.28%), Query Frame = 1
Query:  292 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALE-------------------------------------RGGSGG---------------------------------PKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRSVRV 876
            LPIDAYREEIL HVRNNRVTVIHGETGSGKS+R+P+ML+E+AL+                                       GSGG                                  +PRMFVSQPRRAATRAL  RVR +++R G  + V +RLGHGVREGPPKAEVTFATTGY+ RL+A++PG+LDSHTHLIIDEVHERSVDTDLLC FAKRL+ THPTLRLIVMSAT+SA L++ YYG+   PLFVG++RFP+R V V
Sbjct:  791 LPIDAYREEILEHVRNNRVTVIHGETGSGKSTRIPVMLVEEALDLIAEEAAAVAEXXXXXXXXXXXXXXXXXXXXXXXXSGTTGSGGGEEVGVQAGGEGXXXXXXXXXXXXXXXAAAPQVKRPRMFVSQPRRAATRALVQRVRQEAERSGRGWSVGLRLGHGVREGPPKAEVTFATTGYLARLLASNPGVLDSHTHLIIDEVHERSVDTDLLCLFAKRLVETHPTLRLIVMSATLSANLLSKYYGLTSSPLFVGSRRFPVRQVYV 1055          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: K0RU78_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU78_THAOC)

HSP 1 Score: 214 bits (545), Expect = 2.720e-59
Identity = 107/193 (55.44%), Postives = 138/193 (71.50%), Query Frame = 1
Query:  292 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPK-AEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRS 867
            LPID +  EIL  VR  R+T+IHGETG GKSSR+P ML+  +     +  P+ +M VSQPRR A +ALA+RVR     L  K G  +R+GHG+RE   K     F TTGY+VRL+AN PG  D+H+HLIIDEVHERSVDTD+LC   +RLL++HPT+RL++MSATM+A L   Y+G+  PP+ VGA+RFPI+ 
Sbjct:  662 LPIDEHEGEILRAVRTQRITIIHGETGCGKSSRVPCMLLRASPPEPTATAPEVKMIVSQPRRIAAKALAERVRSCEPDLADKIG--LRMGHGIREYETKDTRAWFVTTGYVVRLLANHPGWFDTHSHLIIDEVHERSVDTDILCLLCRRLLNSHPTIRLVLMSATMAAELYQQYFGVPQPPIHVGARRFPIKE 852          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S4MMP8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MMP8_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.090e-57
Identity = 107/193 (55.44%), Postives = 136/193 (70.47%), Query Frame = 1
Query:  292 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGP-PKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRS 867
            LPID + EEIL  +   RVT+I GETG GKSSR+P+ML+        S     +MF+SQPRR A ++LA+RVR     L  +  +A+R+GHGVRE   P     F TTGY+VRL+AN P    SHTHLIIDEVHERSVDTD+LC   +RLL THPT+RL++MSATM+A L  +Y+G  +PP+FVGA+RFPI+ 
Sbjct:  669 LPIDEHEEEILRTIAEQRVTIIQGETGCGKSSRVPVMLLRAPPPEPTSNARSVKMFISQPRRIAAKSLAERVRQCEPDL--RDCIALRMGHGVREYECPSTRAWFVTTGYLVRLLANHPKSFTSHTHLIIDEVHERSVDTDILCLLCRRLLTTHPTIRLVLMSATMAAALYRSYFGTPEPPIFVGARRFPIKE 859          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S2L2B3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L2B3_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.320e-54
Identity = 103/193 (53.37%), Postives = 134/193 (69.43%), Query Frame = 1
Query:  292 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVRE-GPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRS 867
            LPID +  EIL  ++  RVT+IHGETG GKSSR+P  L+     +     P+ +M VSQPRR A +ALA+RVR     L  K  +A+R+GHG++E    K    F TTGY+VRL+AN P   DSHTHLIIDEVHERSVD+D+LC   +RLLH+HPT+RL++MSAT++A L + Y+G A  P+ VG +RFPI  
Sbjct:  318 LPIDKHEREILNTIKTQRVTIIHGETGCGKSSRVPCFLLRAEPPQPSLAAPEVKMIVSQPRRIAAKALAERVRKVEPDLAHK--IALRMGHGMKEFETQKTRAWFVTTGYVVRLLANHPHWFDSHTHLIIDEVHERSVDSDILCLLCRRLLHSHPTIRLVLMSATLAADLYSQYFG-APQPIHVGVRRFPINE 507          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S3JYC1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYC1_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.220e-54
Identity = 103/188 (54.79%), Postives = 135/188 (71.81%), Query Frame = 1
Query:  292 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRF 855
            LPIDA++++IL HV  NRVT+I GETGSGKSSRLP+ML+        +   K RMFVSQPRR A ++L +RVR     +     + +RLGHG R+   +  V F TTGY+VRLIA+SP +L  HTHLIIDEVHERSVD +++C  A+RL+H+HP LRLIVMSAT+   L+ +Y+   +P +FVGA+RF
Sbjct:  510 LPIDAHQDKILEHVARNRVTIIIGETGSGKSSRLPVMLL--------NANKKNRMFVSQPRRIAAKSLCERVRSQ---VSNGHEIGLRLGHGERDEYKETRVWFCTTGYLVRLIASSPQVLRRHTHLIIDEVHERSVDAEVICLLARRLIHSHPNLRLIVMSATLCTELLADYFCTVEPHVFVGARRF 686          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S2SUV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUV2_9STRA)

HSP 1 Score: 182 bits (463), Expect = 5.240e-53
Identity = 99/192 (51.56%), Postives = 129/192 (67.19%), Query Frame = 1
Query:  292 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLI-------EDALERGGSGGPKP-RMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVG 843
            LPI  + + I  HV ++R+T+IHGETG GKSS +P+ML+       ED   RG     KP +MFV+QPRR A R+L  RVR  S+   +   V +RLGHG R+   +  V FAT GY+  L+A+       HTHLIIDEVHERS+DTD+LC  A+RLL +HPTLRLI+MSAT++A L   Y+G+ +PPLFVG
Sbjct:   70 LPIHDHEDTICNHVADHRITIIHGETGCGKSSTVPLMLLRHHDARREDKAFRGDPMYKKPAKMFVTQPRRIAARSLCQRVRQVSKEPDL---VGLRLGHGERDEKSQTRVWFATVGYVALLLAHHQEKFRDHTHLIIDEVHERSIDTDILCLLARRLLASHPTLRLILMSATIAAELHRQYFGVPEPPLFVG 258          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A7S4RFM2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RFM2_9STRA)

HSP 1 Score: 188 bits (478), Expect = 9.730e-51
Identity = 102/203 (50.25%), Postives = 138/203 (67.98%), Query Frame = 1
Query:  283 TPSL---PIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKP-----RMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRS 867
            TPSL   PIDA+++ IL  V+NNRVT+I GETG GKSS++PIML+E       +  P P     RMF+ QPRR A ++L +R++    +    FG  +R+GHGVRE      V FATTGY+VRL+AN P   D  THL+IDEVHERSV+TD+LC  A+RLL  +  +RLI+MSAT++A +  +Y+ + + PLFVG + FPI+ 
Sbjct:  602 TPSLNELPIDAHKDVILTSVQNNRVTIIQGETGCGKSSKVPIMLLE-------TPPPDPTFKEVRMFICQPRRIAAKSLTERIKSTHPQYKHLFG--LRMGHGVREETKDTRVWFATTGYLVRLLANYPERFDDCTHLVIDEVHERSVETDVLCLLARRLLERNKRIRLILMSATVAAGMYRDYFQVKESPLFVGVRCFPIQE 795          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A3P3YNW4_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YNW4_PLABS)

HSP 1 Score: 186 bits (473), Expect = 1.150e-49
Identity = 100/191 (52.36%), Postives = 133/191 (69.63%), Query Frame = 1
Query:  292 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPP-LFVGAKRFPI 861
            LPIDA+R+ I+ H+  +RVTVI GETG GKSSR+P M+++  + R    G  PRM VSQPRR A RAL +R+R  + R G  +G  +R+GHG R   P+  + F T+GY+V+ +++ P     HTHLIIDEVHERSVD+DLLC  A+RLL  H  LRLIVMSAT+ ++L   Y+ + D   LFVGA+RFP+
Sbjct:  579 LPIDAHRDRIIDHIDRHRVTVIQGETGCGKSSRIPSMILDAEVRR----GRLPRMMVSQPRRIAARALTERLR--TSRHGPVYG--LRMGHGERSETPQTRIWFVTSGYLVQYMSHHPDAFAQHTHLIIDEVHERSVDSDLLCMLARRLLTQHEHLRLIVMSATIQSKLYCAYFRVPDDQTLFVGARRFPV 761          
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Match: A0A1E7ENH0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ENH0_9STRA)

HSP 1 Score: 185 bits (470), Expect = 2.860e-49
Identity = 96/191 (50.26%), Postives = 133/191 (69.63%), Query Frame = 1
Query:  292 LPIDAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKPRMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPK-AEVTFATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTHPTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPI 861
            LPID +  EIL  +RNNRVT+IHGETG GKSSR+P+ML++     G     K + F+SQPRR A +AL +RVR     L  KF  ++R+G G +E   K  + +F TTGY+VRL+AN P   +  THL+IDEVHERSVDTDLLC  ++RLL T+ T+RL++MSAT++ ++  +Y+ + + P+ VG + FPI
Sbjct:  299 LPIDDHETEILDDIRNNRVTIIHGETGCGKSSRVPVMLLKSPPPDGSLR--KVKFFISQPRRIAAKALVERVRSCEPDLKDKF--SLRMGGGWKEYESKETQASFVTTGYLVRLLANHPEKFNEMTHLVIDEVHERSVDTDLLCLLSRRLLQTNKTIRLVLMSATLATKMYRDYFSVINEPIHVGVRTFPI 485          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100109.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLV6_9PHAE1.440e-8546.37Helicase ATP-binding domain-containing protein n=1... [more]
D8LSM0_ECTSI1.640e-7955.85Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
K0RU78_THAOC2.720e-5955.44Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4MMP8_9STRA1.090e-5755.44Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2L2B3_9STRA1.320e-5453.37Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S3JYC1_9STRA2.220e-5454.79Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2SUV2_9STRA5.240e-5351.56Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S4RFM2_9STRA9.730e-5150.25Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A3P3YNW4_PLABS1.150e-4952.36Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
A0A1E7ENH0_9STRA2.860e-4950.26Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100109contigH-elongata_contig100109:358..2185 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score272.3
Seed ortholog evalue2.6e-70
Seed eggNOG ortholog2880.D8LSM0
Preferred nameYTHDC2
KEGG koko:K14442,ko:K20099
KEGG Pathwayko03018,map03018
EggNOG free text desc.positive regulation of polysome binding
EggNOG OGsCOG1643@1,KOG0921@2759
EC3.6.4.13
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019,ko03041
Hectar predicted targeting categoryother localisation
Exons4
Model size876
Cds size876
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100109.15.1prot_H-elongata_contig100109.15.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig100109 358..2185 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929543.7545128-CDS-H-elongata_contig100109:357..5491622929543.7545128-CDS-H-elongata_contig100109:357..549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100109 358..549 -
1691679062.2379093-CDS-H-elongata_contig100109:357..5491691679062.2379093-CDS-H-elongata_contig100109:357..549Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100109 358..549 -
1622929543.777925-CDS-H-elongata_contig100109:834..13331622929543.777925-CDS-H-elongata_contig100109:834..1333Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100109 835..1333 -
1691679062.2659128-CDS-H-elongata_contig100109:834..13331691679062.2659128-CDS-H-elongata_contig100109:834..1333Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100109 835..1333 -
1622929543.8061159-CDS-H-elongata_contig100109:1970..21221622929543.8061159-CDS-H-elongata_contig100109:1970..2122Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100109 1971..2122 -
1691679062.2773232-CDS-H-elongata_contig100109:1970..21221691679062.2773232-CDS-H-elongata_contig100109:1970..2122Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100109 1971..2122 -
1622929543.8215666-CDS-H-elongata_contig100109:2152..21851622929543.8215666-CDS-H-elongata_contig100109:2152..2185Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100109 2153..2185 -
1691679062.3111072-CDS-H-elongata_contig100109:2152..21851691679062.3111072-CDS-H-elongata_contig100109:2152..2185Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100109 2153..2185 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig100109.15.1

>prot_H-elongata_contig100109.15.1 ID=prot_H-elongata_contig100109.15.1|Name=mRNA_H-elongata_contig100109.15.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=292bp
TSSTSSSLSAELLMPLEHFHGPTFHALLNEYRATNGRGVEKEAEAGGEGG
LGAEDDGGELTNCASADVTGTSTISRTGDIGSGGGGGGEGAGTSTPSLPI
DAYREEILAHVRNNRVTVIHGETGSGKSSRLPIMLIEDALERGGSGGPKP
RMFVSQPRRAATRALADRVRGDSQRLGVKFGVAMRLGHGVREGPPKAEVT
FATTGYIVRLIANSPGLLDSHTHLIIDEVHERSVDTDLLCFFAKRLLHTH
PTLRLIVMSATMSARLVNNYYGMADPPLFVGAKRFPIRSVRV
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mRNA from alignment at H-elongata_contig100109:358..2185-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig100109.15.1 ID=mRNA_H-elongata_contig100109.15.1|Name=mRNA_H-elongata_contig100109.15.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1828bp|location=Sequence derived from alignment at H-elongata_contig100109:358..2185- (Himanthalia elongata Himel1 dioecious)
ACCTCCTCAACCTCCTCGTCTTTGTCTGCGGAAGTCTCAGGAGAGGACAA ACAAATTATGCAGCTTTTGATGCCGCTGGAGCACTTTCACGGGCCCACTT TCCACGCGCTGCTTAATGAATACCGCGCGACGAACGGAAGGGGTGTTGAA AAAGAGGCGGAGGCGGGAGGGGAAGGCGGACTCGGGGCTGAGGACGACGG AGGTGAGTTAACGAAGTGGATTGATAGGGTATTTTCCAGTTCGAGTTCAA ACTGGAGGGGCGTAAAGTTCGACCTCCCTCGAAACGAAATGATGTTTGTT TGCTCACATCTTGCCTTTTGGGATCTCGGCTCTACAATAGTATATTAGTA TGATAGTATAATAGCGCTATGTGATCTTGTATGCTTTGTGTTGTGTTGGG TAACGTTTCTGAAAACTGCTGATTCCCTCTGTTGTGTTATGTTTTGTCGA GTTGTATGTGCTATGGTCGTGTTGGATTGTGTTGTGTTGTGTTATGTAAT GTCTTTTGTGACGCGGTGATGTGTTGTGTTGTGCTTGCTTTTATAGGTTT TTGTTTTTGTTTTATTTGTGCCTCGCGTCCTCGAAACGTGCTTCGTGCGC CTGTCGAAAAGTCCGTCGCACGCTGTGGGGCAGAAACCGGCAGCAGACGC CCCTGTCTTCGGGAAATATATAAAAAGTAAGAAGACTGCATGCTTCAGCA CCAAAGCTGGAGCATTATTTTCTTCGTTGTCGGTGATTTCCCGTTCTCAA TATCTTTTCTCTCCATCTCTTTCCCTCCGGATCACGACCGCGTTCGTGTT TTATGATTCTAGGCCATCGGATCGAGCCCAGCACGGTGACCCTCGACAAC AGCTGCGCAAGCGCTGATGTCACTGGTACGAGTACTATTTCTAGGACTGG TGATATCGGGAGCGGCGGTGGCGGAGGGGGCGAGGGGGCGGGGACCTCCA CCCCGTCCCTCCCAATTGATGCCTACAGGGAAGAGATTCTAGCGCACGTC AGGAACAATCGCGTCACCGTTATTCACGGGGAGACCGGCAGCGGCAAGAG TTCGCGGCTACCAATAATGCTCATCGAGGATGCTCTCGAGCGCGGCGGTA GCGGAGGCCCTAAGCCGCGGATGTTCGTGTCGCAGCCACGGCGGGCGGCA ACGCGCGCGCTGGCGGACCGCGTGCGGGGGGATTCCCAGAGGCTGGGGGT CAAGTTCGGCGTCGCTATGAGGCTCGGGCACGGGGTGAGGGAAGGACCCC CCAAGGCTGAGGTGACCTTCGCGACGACTGGTTACATCGTGAGGCTAATC GCCAACAGTCCCGGACTGTTGGACTCTCATACGCACCTGATCATTGACGA GGTACGGGCGCATGCATGTCTGGGTGTTTATCTGAACATATTTCCGTCCC TGTTGGTCTTGTGTAATTTTGTCATGTGTGCGACATCTCTTTTAAGGGTG ATTAGGTAAACATTTTTCTGCTGTTTTACTCTCTTCCCTGCGCCCAGTGT GCGCGTGAAAAAAAATGTGATAGTGATCACATGAACATCGCATACTTGAT ATGTGGTACGAAATCAATCATACGTTGTATTCTACAATCACCGAGAGGTC TTGCGGTGCCTGTTTTTCTCAATTACCCGATCACAGGTTCACGAGCGGTC GGTGGATACGGACCTTCTGTGCTTCTTCGCTAAGAGACTCTTACATACGC ACCCTACCCTCCGGCTGATCGTCATGAGCGCCACCATGTCGGCGAGGCTT GTGAACAATTACTACGGCATGGCGGATCCGCCCCTATTCGTCGGTGCCAA GCGCTTCCCCATAAGGTCTGTGCGCGTA
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Coding sequence (CDS) from alignment at H-elongata_contig100109:358..2185-

>mRNA_H-elongata_contig100109.15.1 ID=mRNA_H-elongata_contig100109.15.1|Name=mRNA_H-elongata_contig100109.15.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1752bp|location=Sequence derived from alignment at H-elongata_contig100109:358..2185- (Himanthalia elongata Himel1 dioecious)
ACCTCCTCAACCTCCTCGTCTTTGTCTGCGGAAACCTCCTCAACCTCCTC
GTCTTTGTCTGCGGAACTTTTGATGCCGCTGGAGCACTTTCACGGGCCCA
CTTTCCACGCGCTGCTTAATGAATACCGCGCGACGAACGGAAGGGGTGTT
GAAAAAGAGGCGGAGGCGGGAGGGGAAGGCGGACTCGGGGCTGAGGACGA
CGGAGGTGAGTTAACGAACTTTTGATGCCGCTGGAGCACTTTCACGGGCC
CACTTTCCACGCGCTGCTTAATGAATACCGCGCGACGAACGGAAGGGGTG
TTGAAAAAGAGGCGGAGGCGGGAGGGGAAGGCGGACTCGGGGCTGAGGAC
GACGGAGGTGAGTTAACGAACTGCGCAAGCGCTGATGTCACTGGTACGAG
TACTATTTCTAGGACTGGTGATATCGGGAGCGGCGGTGGCGGAGGGGGCG
AGGGGGCGGGGACCTCCACCCCGTCCCTCCCAATTGATGCCTACAGGGAA
GAGATTCTAGCGCACGTCAGGAACAATCGCGTCACCGTTATTCACGGGGA
GACCGGCAGCGGCAAGAGTTCGCGGCTACCAATAATGCTCATCGAGGATG
CTCTCGAGCGCGGCGGTAGCGGAGGCCCTAAGCCGCGGATGTTCGTGTCG
CAGCCACGGCGGGCGGCAACGCGCGCGCTGGCGGACCGCGTGCGGGGGGA
TTCCCAGAGGCTGGGGGTCAAGTTCGGCGTCGCTATGAGGCTCGGGCACG
GGGTGAGGGAAGGACCCCCCAAGGCTGAGGTGACCTTCGCGACGACTGGT
TACATCGTGAGGCTAATCGCCAACAGTCCCGGACTGTTGGACTCTCATAC
GCACCTGATCATTGACGAGCTGCGCAAGCGCTGATGTCACTGGTACGAGT
ACTATTTCTAGGACTGGTGATATCGGGAGCGGCGGTGGCGGAGGGGGCGA
GGGGGCGGGGACCTCCACCCCGTCCCTCCCAATTGATGCCTACAGGGAAG
AGATTCTAGCGCACGTCAGGAACAATCGCGTCACCGTTATTCACGGGGAG
ACCGGCAGCGGCAAGAGTTCGCGGCTACCAATAATGCTCATCGAGGATGC
TCTCGAGCGCGGCGGTAGCGGAGGCCCTAAGCCGCGGATGTTCGTGTCGC
AGCCACGGCGGGCGGCAACGCGCGCGCTGGCGGACCGCGTGCGGGGGGAT
TCCCAGAGGCTGGGGGTCAAGTTCGGCGTCGCTATGAGGCTCGGGCACGG
GGTGAGGGAAGGACCCCCCAAGGCTGAGGTGACCTTCGCGACGACTGGTT
ACATCGTGAGGCTAATCGCCAACAGTCCCGGACTGTTGGACTCTCATACG
CACCTGATCATTGACGAGGTTCACGAGCGGTCGGTGGATACGGACCTTCT
GTGCTTCTTCGCTAAGAGACTCTTACATACGCACCCTACCCTCCGGCTGA
TCGTCATGAGCGCCACCATGTCGGCGAGGCTTGTGAACAATTACTACGGC
ATGGCGGATCCGCCCCTATTCGTCGGTGCCAAGCGCTTCCCCATAAGGTC
TGTGCGCGTAGTTCACGAGCGGTCGGTGGATACGGACCTTCTGTGCTTCT
TCGCTAAGAGACTCTTACATACGCACCCTACCCTCCGGCTGATCGTCATG
AGCGCCACCATGTCGGCGAGGCTTGTGAACAATTACTACGGCATGGCGGA
TCCGCCCCTATTCGTCGGTGCCAAGCGCTTCCCCATAAGGTCTGTGCGCG
TA
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