mRNA_H-elongata_contig7323.15000.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig7323.15000.1
Unique NamemRNA_H-elongata_contig7323.15000.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 2.250e-93
Identity = 145/273 (53.11%), Postives = 195/273 (71.43%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFDTEGGSTSATYRPGND-QTNIPFLPNLKKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIISMYWYPGGSAGSSTTCVHEEGGWTTHPENVYVYLRDPGTSMVSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFV-AIVQGPHLKPRKVWPPAVPGAE 813
            N +Y YPD +VCL+  +GCD   LEE C +S+FDTEGGS++A + PG D +  I     L  +RGWCV F TS ++  +  ER   D  DYI+++MYWYPGG+A +STTC+ EEG W +H E+V+++LRD  T ++SAGIQ+ Y+CMTSES+SH FTYMGIG+T+E +L  + T+SY AL  SS  +KD+R  +ITGI  PYA+LS+E+ Q +DS   ITEI+PL++AE+ G VGGFWDL+L+LWPIFF+ A  Q PHLK R        G+E
Sbjct:   52 NNVYRYPDTYVCLYNFFGCDDMALEEFCASSVFDTEGGSSTAVFNPGGDLEQEIATTAYLTDERGWCVSFETSAVDI-VDGER---DPEDYILLNMYWYPGGTANASTTCISEEGEWESHSESVFMFLRDSDTGILSAGIQVAYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALETSSAIYKDKRTDNITGIASPYAWLSMEIAQTTDSLEEITEINPLEIAELFGNVGGFWDLLLMLWPIFFISASRQDPHLKVRNFKKSVTRGSE 320          
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 7.140e-90
Identity = 147/313 (46.96%), Postives = 197/313 (62.94%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFDTEGGSTSATYRPGND-QTNIPFLPNLKKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIISMYWYPGGSAGSSTTCVHEEGGWTTHPENVYVYLRDPG---TSMVSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFVAIV-QGPHLKPRKVWPPAVPGAEDAAKGPTFPRSLLPSTRNIPECVSSGAKQDALPSWER 924
            N +Y YPD+WVCL+  YGCD++ELEE+C+ S   T  G+TSA + PG + +  IP +  L  + GWCV F TS +   LG ERN+S Y+DY+++ MYWYPGG+   S TCV E  GW  H E +YV L+D G   + +VS GIQ+PY+C+T+ S+SH FTY+G+GVT E  L  E  ++  AL+VS+  HKD+ +A+I   + PYA LSL+ QQE +S  VITE DP D+AE+ G VGGFWDL++++WPIFFVA   Q PHLKPR        G E    G            + PE       ++  P WER
Sbjct:   52 NTVYEYPDIWVCLYGEYGCDSWELEEECMESAQLTGWGNTSAVFYPGGEYEQTIPGVGMLTPEDGWCVEFETSTISQFLGQERNASYYLDYLLLDMYWYPGGTESDSNTCVVE--GWEPHSEWMYVKLKDSGYPESGLVSTGIQVPYSCITNVSSSHSFTYVGMGVTIEERLGEEPVATNKALSVSTATHKDKVNAAI---DKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAKGLEGLRIGELVTAGTRKDGSSNPE------DEEEKPHWER 353          
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 8.290e-84
Identity = 137/264 (51.89%), Postives = 177/264 (67.05%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFD--TEGGSTSATYRPGND-QTNIPFLPNLKKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIISMYWYPGGSAGSSTTCVHEEGGWTTHPENVYVYLRDPGTSMVSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFVAIV-QGPHLKPR 780
            N ++ YPD+WVCL+ +YGCD +ELEE+C+ S     T  G +SA Y PG   +  I     L    GWCV F TS +   LG ER++  Y+DY+++ MYWYPGG    STTCV E  GW TH + +YV+L DP    VS GIQ+PY+C+T+ S+SH  TY+GIGVT E +L  E   +  AL+VS+   KDE + +I     PYA LSL+VQQE +S  VITE+DPLD+AE+ G VGGFWDL++I+WPIFFVA   Q PHLKPR
Sbjct:   92 NTVFEYPDVWVCLYVDYGCDEWELEEECMTSATANRTGWGHSSAVYYPGGVYEQEIHVEEKLTPNNGWCVEFQTSKITRFLGRERDAKYYLDYLLLDMYWYPGGLEVDSTTCVVE--GWKTHKQWMYVFLNDPVLGQVSTGIQVPYSCITNVSSSHSHTYVGIGVTTEDKLGQEPIVNNKALSVSTATVKDEVNPAIV---KPYAQLSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPR 350          
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 2.610e-81
Identity = 133/264 (50.38%), Postives = 175/264 (66.29%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFD--TEGGSTSATYRPGND-QTNIPFLPNLKKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIISMYWYPGGSAGSSTTCVHEEGGWTTHPENVYVYLRDPGTSMVSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFVAIV-QGPHLKPR 780
            N ++ YPD+WVCL+  YGCD +ELE +C+ S     T  G++SA Y PG   +  I     L    GWCV F TS +   L  ER++  Y+DY+++ MYWYPGG    S TCV E  GW TH + +YV+L DP +  VS GIQ+PY+C+T+ S+SH FTY+GIGVT E +L  E   +  AL+VS+   KDE + +I     PYA LSL+ QQE +S  +ITE+DPLD+AE+ G VGGFWDL++I+WPIFFVA   Q PHLKPR
Sbjct:  124 NTVFEYPDIWVCLYVAYGCDEWELENECMTSATGNRTGWGNSSAVYYPGGVYEQEIHVEGKLTPNNGWCVEFQTSKITRFLDRERDAKYYLDYLLLDMYWYPGGLEADSNTCVVE--GWKTHNQWMYVFLNDPESERVSTGIQVPYSCITNVSSSHSFTYVGIGVTIEDKLGQEPIVNNKALSVSTATVKDEVNPAIV---KPYAQLSLQFQQEPNSLEIITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPR 382          
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 1.470e-80
Identity = 131/264 (49.62%), Postives = 175/264 (66.29%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFD--TEGGSTSATYRPGND-QTNIPFLPNLKKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIISMYWYPGGSAGSSTTCVHEEGGWTTHPENVYVYLRDPGTSMVSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFVAIV-QGPHLKPR 780
            N ++ YPD+WVCL+A+YGCD  ELEE+C+ S     T  G++SA Y PG + +  I          GWCV F TS +   LG ER++S ++D++++ MYWYPGG    STTCV E  GW TH + +YV+L DP    VS  + +PY+C+T+ S+SH FTY+GIG+T E +L  E   S  AL+VS+   K E + +I     PYA LSL+VQQ  +S   ITE+DPLD+AE+ G VGGFWDL++I+WPIFFVA   Q PHLKPR
Sbjct:   52 NTVFEYPDIWVCLYADYGCDELELEEECMTSATANMTGWGNSSAVYYPGGEYEQEIHVEGRETPDHGWCVEFQTSKITRFLGEERDASRFLDHLLLDMYWYPGGLETDSTTCVIE--GWKTHNQWMYVFLNDPALGQVSTRVPVPYSCITNVSSSHSFTYVGIGLTTEIKLGQEPIVSNKALSVSTATVKHEVNPAIV---KPYAQLSLQVQQAPNSHECITEVDPLDLAEMFGNVGGFWDLLMIIWPIFFVAASRQDPHLKPR 310          
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 4.790e-80
Identity = 142/337 (42.14%), Postives = 200/337 (59.35%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFDTEGGSTSATYRPG----------NDQTNIPFLP----------NLKKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIISMYWYPGGSAGSSTTCVHEEGGWTTHPENVYVYLRDPGT-SMVSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFVAIVQ-GPHLKPRKVWPPAVPGAEDAA---KGPTFPRSLLPS-TRNIPECVSSGAKQDALPSWEREAA 933
            NE+Y +PDLW+CL+ NYGCD  ELEE+C+NS + TEGG  +A + P            +Q  I  +P          +L+  RG CV+F TS     +G ER+  +++DYI++ MYW PGG++G STTCV +   WT H E VY +L DP   S +S G+ L Y+C+T+ S +H F  MGIG+T++ +   +  SSY AL  +   HK+  + +IT    PYA+LSLE++Q+ DS  +ITE +P + AE+ G +GGFWDL+LILWP+ FVA  Q  PHLKPR      V GAE AA   K       + PS T++    V     ++  P+W+R  A
Sbjct:   88 NEVYKFPDLWICLYVNYGCDELELEEKCVNSAWTTEGGVPNAVFYPRVQLDQEQEITTEQLQIEAIPENTDVDSEGNSLEDGRGKCVIFRTSAATAFVGQERDPHEFLDYILLDMYWNPGGTSGKSTTCVPDGVEWTDHREWVYGFLSDPDDPSAISTGVHLSYSCITNTSNTHTFNTMGIGLTQQKKFMDDDKSSYKALFTNFGVHKNVVNPNITT---PYAHLSLEMKQQFDSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAAAQQDPHLKPRSFKKSVVRGAERAASVSKAIARAAPINPSITKSAASAVDGFEDEEEAPAWDRRPA 421          
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 6.480e-77
Identity = 142/331 (42.90%), Postives = 194/331 (58.61%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFDTEGGSTSATYRPGN--DQTN-----------IPFLPNLKKQ-------RGWCVVFNTSDLEYNLGSERNSSDYMDYIIISMYWYPGGSAGSSTTCVHEEGGWTTHPENVYVYLRDPGTSM-VSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFV-AIVQGPHLKPRKVWPPAVPGAEDAAKGPT--FPRSLLPSTRNIPECVSSGAKQDALPSWE 921
            N +Y YPDLW+C + NYGCD +ELEE+C++S + TEGG   A + P    DQ +           IP L N   +       RG CV+F TS     +G ER+S +Y+DYI + MYWYPGG  G+STTCV E   W  H E VY +L DP  S  +S G  L Y+C+T+ S +H F  +GIG+T +++   +  SSY AL  +   HK+  + ++T    PYA+LSLE++Q++DS  +ITE +P + AE+ G +GGFWDL+LILWP+ FV A  Q PHLKPR      + GAE AA G T    R+      N    V     Q+ +P+WE
Sbjct:   65 NVVYKYPDLWICPYVNYGCDAWELEEECVDSAWMTEGGEPDAVFYPREKLDQLHQVTTEERKIAAIPDLTNFDSEGNFVEDGRGHCVIFETSAATDFVGQERDSHEYLDYIHLDMYWYPGGKFGNSTTCVAEGVEWADHREWVYGFLSDPEDSTAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVT---MPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVTATQQDPHLKPRTFKKSVIRGAERAA-GVTKVIARAAPVRHSNAMPGVDGFEDQEEVPAWE 391          
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 2.100e-73
Identity = 127/277 (45.85%), Postives = 173/277 (62.45%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFDTEGGSTSATY--RPGNDQT------------NIPFLPNLKKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIISMYWYPGGSAGS-STTCVHEEGGWTTHPENVYVYLRDP-GTSMVSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFVAIVQG-PHLKPR 780
            N +YTYPDLWVC +  YGCD   LE  C+ S ++TE G  +A +    G DQ             +   +  + K RG CV F TS     +G ER+  +Y+DYI++ MYWYP G+  + STTCV +   W  H E VY +L DP   +MVS  +QL Y+C+TS S SH F  +GIG+T + + + +  SSY A++++S  +KD+ DA IT    PYA LS+E++Q+ DS  +ITE DP + AEI+G +GGFWDLILILWP+FFVA  Q  P+LKPR
Sbjct:   52 NVVYTYPDLWVCPYNQYGCDDITLELGCVESSWETEAGPPNAIFYNSEGTDQNATDPLEIEATWVDTSAIEGIVKGRGLCVEFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTDSTTCVEDGEEWEPHREWVYAFLTDPEDVTMVSTAVQLSYSCITSASTSHVFNSVGIGLTNQIKYAADDVSSYKAVSINSGVYKDQADADIT---KPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPR 325          
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: D8LNS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS2_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 5.520e-73
Identity = 133/334 (39.82%), Postives = 190/334 (56.89%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFDTEGGSTSATYRPG----------NDQTNIPFLPN----------LKKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIIS-MYWYPGGSAGSSTTCVHEEGGWTTHPENVYVYLRDP-GTSMVSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFVAIVQ-GPHLKPRKVWPPAVPGAEDAAKGPTFPRSLLP----STRNIPECVSSGAKQDALPSWE 921
            NE+Y +PDLW+CL  NYGCD +ELEE C++S + TEGG   A + P            ++  I  +P           ++  RG CV+F TS     +G ER+  +Y+DY+ +  MYWYPGG  G+STTCV +   W  H E VY +L DP   + +S G  L Y+C+T+ S +H F  +GIG+T +++   +  SSY AL  +   HK+  + ++T    PYA+LSLE++Q++DS  +ITE +P + AE+ G +GGFWDL+LILWP+ FVA  Q  PHLKPR      + GAE AA          P    S+      V     Q+ +P+WE
Sbjct:   64 NEVYKFPDLWICLFVNYGCDEWELEEGCVDSAWMTEGGVPDAVFYPRVKLDQLQETTTEELQIEAIPENTDYDSEGNYVEDGRGQCVIFKTSAATTFVGQERDPHEYLDYVHLDQMYWYPGGKFGNSTTCVVDGVEWADHREWVYGFLSDPEDPAAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVT---MPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVATTQQDPHLKPRTFKKSVIRGAERAAGVTKVIARAAPIRHSSSMTATPAVDGFEDQEVVPAWE 394          
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Match: A0A6H5JV19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV19_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 4.600e-70
Identity = 137/381 (35.96%), Postives = 196/381 (51.44%), Query Frame = 1
Query:    1 NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFDTEGGSTSATYRPG----------NDQTNIPFLPNL----------KKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIIS--------------------------------------------MYWYPGGSAGSSTTCVHEEGGWTTHPENVYVYLRDP-GTSMVSAGIQLPYTCMTSESASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHPYAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFVAIVQ-GPHLKPRKVWPPAVPGAEDAAKGPTFPRSLLP----STRNIPECVSSGAKQDALPSWEREAA 933
            NE+Y YPDLW+C + NYGCD +ELEE+C+ S + TEGG   A + P            ++  I  +P+L          +  RG CVVF TS +   LG ER+  +Y+DY+ +                                             MYWYPGG  G+STTCV+E   W  H E VY +L DP   + +S G  L Y+C+T+ S +H F  +G+G+T + +   +  SSY AL  +   HK+  + +IT    PYA++SLE++Q++DS  +ITE +P + AE+ G +GGFWDL+LILWP+ FVA  Q  PHLKPR     AV GA+  A          P    S+ +    V     Q+ +P+W+R+ A
Sbjct:   15 NEVYKYPDLWICPYVNYGCDAWELEEECVASAWMTEGGEPDAVFYPRVKLDQLHQVTTEERQINAIPDLTNFDSEGNEQENGRGHCVVFETSAITDFLGQERDPHEYLDYVHLDGILPVGLVANGSLSQHELEPVIGSTVPLSRPCRPDKRMFFADEQMYWYPGGKFGNSTTCVNEGVEWADHREWVYGFLSDPEDPTAISTGFPLSYSCITNTSNTHIFNTLGVGLTNQIKFMSDDISSYKALFTNFGVHKNAVNPNIT---MPYAHVSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAATQQDPHLKPRSFTKSAVRGAQRVAGVTKMVARAAPVKHTSSTSHASAVDGFEDQEEVPAWDRQPA 392          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7323.15000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FU23_ECTSI2.250e-9353.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LMD2_ECTSI7.140e-9046.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K474_9PHAE8.290e-8451.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD1_ECTSI2.610e-8150.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JN97_9PHAE1.470e-8049.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L518_9PHAE4.790e-8042.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ3_ECTSI6.480e-7742.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXH8_ECTSI2.100e-7345.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNS2_ECTSI5.520e-7339.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JV19_9PHAE4.600e-7035.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7323contigH-elongata_contig7323:6259..10045 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size960
Cds size960
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7323.15000.1prot_H-elongata_contig7323.15000.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig7323 6259..10045 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931134.0765948-CDS-H-elongata_contig7323:6258..66511622931134.0765948-CDS-H-elongata_contig7323:6258..6651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 6259..6651 -
1691679712.2206552-CDS-H-elongata_contig7323:6258..66511691679712.2206552-CDS-H-elongata_contig7323:6258..6651Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 6259..6651 -
1622931134.1034458-CDS-H-elongata_contig7323:7154..72471622931134.1034458-CDS-H-elongata_contig7323:7154..7247Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 7155..7247 -
1691679712.2423017-CDS-H-elongata_contig7323:7154..72471691679712.2423017-CDS-H-elongata_contig7323:7154..7247Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 7155..7247 -
1622931134.1235447-CDS-H-elongata_contig7323:8028..81431622931134.1235447-CDS-H-elongata_contig7323:8028..8143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 8029..8143 -
1691679712.254443-CDS-H-elongata_contig7323:8028..81431691679712.254443-CDS-H-elongata_contig7323:8028..8143Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 8029..8143 -
1622931134.1431403-CDS-H-elongata_contig7323:9188..92651622931134.1431403-CDS-H-elongata_contig7323:9188..9265Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 9189..9265 -
1691679712.2682889-CDS-H-elongata_contig7323:9188..92651691679712.2682889-CDS-H-elongata_contig7323:9188..9265Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 9189..9265 -
1622931134.175287-CDS-H-elongata_contig7323:9577..96761622931134.175287-CDS-H-elongata_contig7323:9577..9676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 9578..9676 -
1691679712.276986-CDS-H-elongata_contig7323:9577..96761691679712.276986-CDS-H-elongata_contig7323:9577..9676Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 9578..9676 -
1622931134.2248862-CDS-H-elongata_contig7323:9862..100451622931134.2248862-CDS-H-elongata_contig7323:9862..10045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 9863..10045 -
1691679712.2852063-CDS-H-elongata_contig7323:9862..100451691679712.2852063-CDS-H-elongata_contig7323:9862..10045Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig7323 9863..10045 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig7323.15000.1

>prot_H-elongata_contig7323.15000.1 ID=prot_H-elongata_contig7323.15000.1|Name=mRNA_H-elongata_contig7323.15000.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=320bp
NEIYTYPDLWVCLHANYGCDTYELEEQCINSIFDTEGGSTSATYRPGNDQ
TNIPFLPNLKKQRGWCVVFNTSDLEYNLGSERNSSDYMDYIIISMYWYPG
GSAGSSTTCVHEEGGWTTHPENVYVYLRDPGTSMVSAGIQLPYTCMTSES
ASHRFTYMGIGVTEEHELSGEKTSSYNALTVSSVDHKDERDASITGIEHP
YAYLSLEVQQESDSRIVITEIDPLDVAEIIGEVGGFWDLILILWPIFFVA
IVQGPHLKPRKVWPPAVPGAEDAAKGPTFPRSLLPSTRNIPECVSSGAKQ
DALPSWEREAATSSDQQVK*
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mRNA from alignment at H-elongata_contig7323:6259..10045-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig7323.15000.1 ID=mRNA_H-elongata_contig7323.15000.1|Name=mRNA_H-elongata_contig7323.15000.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3787bp|location=Sequence derived from alignment at H-elongata_contig7323:6259..10045- (Himanthalia elongata Himel1 dioecious)
AATGAAATTTATACCTACCCAGACCTGTGGGTGTGTCTGCACGCTAACTA CGGCTGCGACACATATGAGCTGGAAGAGCAATGCATCAATTCCATTTTTG ACACCGAGGGTGGATCTACAAGCGCAACCTACCGACCGGGAAACGATCAA ACGAATATTCCGTTTTTGCCAAATCTTAAAAAGGTGATAGAGCGGCGTCT AATGCACGCAATGAAGGAAAGCCAGCATAATACACGATGTCGCTATAATA GTTCGCATTGGAGAAATATTCATTAATATAAGGTATATGTCTTATAATAC TCAACGACCGTACTGCCGAACTTGAGTGTGTCAATCGATGTGGTATCTTG TTTCCATTATCGCCAGTAGCAGCGTGGCTGGTGCGTTGTGTTTAACACGT CAGATCTGGAATACAACCTTGGGAGCGAGCGGAATTCCAGCGACTACATG GACTATATAATCATCAGTGTAAGTCCCAGGAAACATAGCGAAGCCATAGG ATTCACTGAACCGTGGTGAGTTGCTGTACTATCCATCGCCTCATTTCTGT TGTTTCACGCGAACCACAGGTTTTCGTGACAATTTCTCGTTTTCTTTAAT ATAGGTCGTTGATTTCGATCTTGTCCATACCAGGGCGAAGGAAAAACTGA AATTAAGTGCTCATGCTTGCCCTGATATGGCGATCCTATTATAAGATTGA TTCGCTACCCAAACGCTCTTACTAAGGATCCCACCGTCTAAGTATATGAC GTCATAACAATAAACAATGCCACGCAATAGATGTACTGGTACCCTGGCGG CAGCGCGGGCAGCTCGACCACGTGCGTCCACGAGGAGGGTGGATGGACGA CGCACCCGTAAGTGGAGTGCATTCGCCGCTCTTGTAGGTAGGCCCATAGG ATTGCGAAGATTTTTGTTTCACAGCGAGGGTACCGAGCTCTCTCTATGCG ATTTCTACTATCACAGGAGCTCTCAAGGAGGAGATGATTGTTACCTATAC GATGTATAATACGTAGTTCCCTTTTAAATCATTATCCTAGGGGTTACTAT TCCCCATACATCCGCTGGCAATCCCCCCAATTAAAGCACCACACCGACGG TGCTGATGAAATTAGCAAGACACTGCTACTCGAGACCCCACGGCAAGGGT TACGATGCTCGTTTCCATCCCGTGGGGGTTGCCCCCCGAACACGTGTTCT TCTCGTGACTGGTGTCTTCTTACATAGATGTCTTAGCTTGAATAATGATC ACACGCAGATAATGTTTCCTTCTAAATGCTTCCATCTCTTCTTTCCTATG TTGGGGCGCAAGCTGTGTTTTGGGCACCGTTTCTAAGCATTTAGAAGATA TGTTCACAAGGGCTTACGCCGCGCTGCGCTAAAGTGACATCAATTAGAGG AACGTTTCAAATGTTTTCTGGAGTTATTTCGCATATCTATATACCGTGAA TTCGGGGTAGCACGAGAAACACAAATAGGTAAGACACGGTAGAGTATAAA AACCACACAAGGACATATATCAGTTTAATCTAAATCCCACAACGAGGTCG CGAGATGATGGGGCTGGCAACAAAGGGACGCGCCAAACACATACACGCGG ACAGCCAGGTAAATACGTGACGACCTTTGGAAACTGTACAAGTCATCCCG CACATGCTCGCAAGCAGATCATCCCAAGGCGGGATGTCACGGTACTTGTC AGACAGTAACGCCAAGGAGAGGTATACCGAGAACAGGACATGGGGCATAT TGTTGAATTGTTAAATACCAGACGCCAGTTGTGTGGTGTTGGGTTAAACG TGAATTTGATTATGTTCCACGTTTGGCCTCAAAGAACATATATCTAGGTG AGCATCTATTTACGATGCCCCGTGCGTCGTTTACGAACCATTTACCGCAC AGGGAGAATGTGTACGTCTATCTGAGGGATCCGGGCACGAGCATGGTATC TGCAGGAATTCAACTACCGTACACGTGCATGACGAGTGAATCCGCAAGCC ACCGTTTTACATACATGGTAGGTGCCGGTTAGGCCGAATTTGAGCACCTC AAAATATTGTCGAGGTGTGTCAGGCCTTGTTTCAGGGTCTTGAGATAGTT TGTAGATATAGTTGGAAATCTGTATATTCGATGATCCACTTGAAGCGGGA CTGAAGCATCGAAAATGAGCGGGATGACGTGGGACGCGGGGCCAAATTAT CAGGCGCGAACGGTGATAAGAAAAATTTATTTCCCTGTTTAGCTAGCCAC AAGGAGGATTAGTAACCATATCATGTTGTTCCATACACACATATATATAT ATATTATAAAATATGACTGATCATCCATCGGGAAGATCAATGCGTGTAGC CTAGAAGGACTGCCATGATAGGACCGGATTGCTCAGTTATGTGAAAGTAA AAAATACAAATACATGCACATAGAGTATATCTCCTTTGCTACGTCTGATC AAAGGTCTTGTAGCAAATATAATCCGGCCATCATTGGGAGGATCAATGCG TGTAGTCTAGAAGGGCTTGTACGACAGTGCCGGACTGCGCGGTTATGTGC AATGTAATAAATACACACACACACACACACACACACACACACACACACAC ACACATAAATCCACACACCACACGCACGCACACAATGCGTGTAGCCTAAC ATGACGAGCATGACAGGGCCGGATTTCACGATTATGCGCAATACAATACA CACACTAACCTTACAAAAAGATAGATGGAGCGAAATATGTTGTCCATTAA TAGGCCTTAACGATGGTGTTTGGTACATTTGTACTTTTCAATCAGCAGGG GATCGGCGTTACTGAAGAGCATGAACTCTCGGGAGAAAAAACCTCTTCGT ATAATGCTCTCACTGTATCTTCGGTCGACCACAAAGACGAGGTACGGAAT GGAGCTTCCACGCAAGGAACATCATTAAGTCTGATCGTTTTGCTATCCGG CTTCGCTGTATGGCCCACTGCCTATTCGTGCTACAAGTAAGCTTAAAATA TTGAAGACATACGAAGTGGGCTATTTTACAGCGTTAATAGGTTGGTTCAG TGGCAGCTATTGTAGGAAAAAATCGGTGAAAGAGCCCCAAGAAGAGCGAG ACACGAAATAGGTGGTACTGGTGAAACGGCACGCAAGTATGTTTAAAATA TTATTATTCGAGTCCCAATGCTCTCGAGGAATACTCTATCCTCCACACCC CTTTCGGCGAACCTGCAGACTTATATATTCCCGACTATTCAGCGGACGGT TTTACCGGATCATCTACGCTATCCGTGCACAGCGGTATTTTCCCGAAACT CGAACTATGCACAAATGGTCGACGGTGACCGGCAATCTGCTACATTCTTC ACAACGTTTGCATGTTGCCCTTGCCCATTTTCGCACTTCGAAAGAGGGAT GCCAGTATTACAGGGATAGAGCATCCCTACGCGTATTTGTCCCTGGAGGT ACAACAGGAATCGGATTCGAGGATCGTGATCACGGAAATTGATCCTCTCG ATGTGGCTGAAATTATCGGCGAGGTTGGAGGATTTTGGGATCTGATTCTG ATTCTGTGGCCGATATTCTTTGTAGCCATTGTCCAGGGCCCACATCTCAA ACCTCGCAAAGTTTGGCCGCCTGCCGTACCAGGAGCGGAGGATGCCGCAA AGGGCCCGACGTTTCCTCGGAGCTTGTTGCCATCCACAAGGAATATACCC GAATGCGTCTCATCTGGCGCCAAACAAGACGCATTGCCGTCTTGGGAGAG GGAAGCTGCTACATCAAGTGACCAACAGGTGAAATAA
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Coding sequence (CDS) from alignment at H-elongata_contig7323:6259..10045-

>mRNA_H-elongata_contig7323.15000.1 ID=mRNA_H-elongata_contig7323.15000.1|Name=mRNA_H-elongata_contig7323.15000.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1920bp|location=Sequence derived from alignment at H-elongata_contig7323:6259..10045- (Himanthalia elongata Himel1 dioecious)
AATGAAATTTATACCTACCCAGACCTGTGGGTGTGTCTGCACGCTAACTA
CGGCTGCGACACATATGAGCTGGAAGAGCAATGCATCAATTCCATTTTTG
ACACCGAGGGTGGATCTACAAGCGCAACCTACCGACCGGGAAACGATCAA
ACGAATATTCCGTTTTTGCCAAATCTTAAAAAGAATGAAATTTATACCTA
CCCAGACCTGTGGGTGTGTCTGCACGCTAACTACGGCTGCGACACATATG
AGCTGGAAGAGCAATGCATCAATTCCATTTTTGACACCGAGGGTGGATCT
ACAAGCGCAACCTACCGACCGGGAAACGATCAAACGAATATTCCGTTTTT
GCCAAATCTTAAAAAGCAGCGTGGCTGGTGCGTTGTGTTTAACACGTCAG
ATCTGGAATACAACCTTGGGAGCGAGCGGAATTCCAGCGACTACATGGAC
TATATAATCATCAGTCAGCGTGGCTGGTGCGTTGTGTTTAACACGTCAGA
TCTGGAATACAACCTTGGGAGCGAGCGGAATTCCAGCGACTACATGGACT
ATATAATCATCAGTATGTACTGGTACCCTGGCGGCAGCGCGGGCAGCTCG
ACCACGTGCGTCCACGAGGAGGGTGGATGGACGACGCACCCATGTACTGG
TACCCTGGCGGCAGCGCGGGCAGCTCGACCACGTGCGTCCACGAGGAGGG
TGGATGGACGACGCACCCGGAGAATGTGTACGTCTATCTGAGGGATCCGG
GCACGAGCATGGTATCTGCAGGAATTCAACTACCGTACACGTGCATGACG
AGTGAATCCGCAAGCCACCGTTTTACATACATGGGAGAATGTGTACGTCT
ATCTGAGGGATCCGGGCACGAGCATGGTATCTGCAGGAATTCAACTACCG
TACACGTGCATGACGAGTGAATCCGCAAGCCACCGTTTTACATACATGGG
GATCGGCGTTACTGAAGAGCATGAACTCTCGGGAGAAAAAACCTCTTCGT
ATAATGCTCTCACTGTATCTTCGGTCGACCACAAAGACGAGGGGATCGGC
GTTACTGAAGAGCATGAACTCTCGGGAGAAAAAACCTCTTCGTATAATGC
TCTCACTGTATCTTCGGTCGACCACAAAGACGAGAGGGATGCCAGTATTA
CAGGGATAGAGCATCCCTACGCGTATTTGTCCCTGGAGGTACAACAGGAA
TCGGATTCGAGGATCGTGATCACGGAAATTGATCCTCTCGATGTGGCTGA
AATTATCGGCGAGGTTGGAGGATTTTGGGATCTGATTCTGATTCTGTGGC
CGATATTCTTTGTAGCCATTGTCCAGGGCCCACATCTCAAACCTCGCAAA
GTTTGGCCGCCTGCCGTACCAGGAGCGGAGGATGCCGCAAAGGGCCCGAC
GTTTCCTCGGAGCTTGTTGCCATCCACAAGGAATATACCCGAATGCGTCT
CATCTGGCGCCAAACAAGACGCATTGCCGTCTTGGGAGAGGGAAGCTGCT
ACATCAAGTGACCAACAGGTGAAATAAAGGGATGCCAGTATTACAGGGAT
AGAGCATCCCTACGCGTATTTGTCCCTGGAGGTACAACAGGAATCGGATT
CGAGGATCGTGATCACGGAAATTGATCCTCTCGATGTGGCTGAAATTATC
GGCGAGGTTGGAGGATTTTGGGATCTGATTCTGATTCTGTGGCCGATATT
CTTTGTAGCCATTGTCCAGGGCCCACATCTCAAACCTCGCAAAGTTTGGC
CGCCTGCCGTACCAGGAGCGGAGGATGCCGCAAAGGGCCCGACGTTTCCT
CGGAGCTTGTTGCCATCCACAAGGAATATACCCGAATGCGTCTCATCTGG
CGCCAAACAAGACGCATTGCCGTCTTGGGAGAGGGAAGCTGCTACATCAA
GTGACCAACAGGTGAAATAA
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