prot_H-elongata_contig7320.14998.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7320.14998.1
Unique Nameprot_H-elongata_contig7320.14998.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length153
Homology
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BLAST of mRNA_H-elongata_contig7320.14998.1 vs. uniprot
Match: D8LCN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN7_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 3.310e-21
Identity = 60/144 (41.67%), Postives = 78/144 (54.17%), Query Frame = 0 
Query:   20 IDGTMDISLTTGGNSALCGIFMDIGEEYLIDLYYNSYDD---------DQLAAVGSCGIFRSWDSITADDIELLDSGCDDYYPCGVACGEFQECKMSFDFYAGPSFDCIDTCD-PSPCAEDEVCELLSSACSDEATSCPPIVSC 153
            +DG  +IS  TGGNSA+CG+ + IGEEYL+ LY    D           QL  VG C + R W  +  D+   L++GC +   C V+CGEFQEC +  D      + C DTCD P  CA++E C L   AC      CPP+ SC
Sbjct:   84 VDGQDEISFVTGGNSAICGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLT-VGLCDLARVWSDVPDDEKADLEAGCGE---CDVSCGEFQECLLYEDGLESEYY-CADTCDDPDRCADNETCVLTEVACI--RAPCPPVASC 220
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BLAST of mRNA_H-elongata_contig7320.14998.1 vs. uniprot
Match: A0A6H5JAS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS0_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.740e-16
Identity = 50/145 (34.48%), Postives = 76/145 (52.41%), Query Frame = 0 
Query:   20 IDGTMDISLTTGGNSALCGIFMDIGEEYLIDLY-YNSYDDDQLAAVGSCGIFRSWDSITADDIELLDSGCDDYYPCGVACGEFQECKMSFDFYA----------GPSFDCIDTCDPSPCAEDEVCELLSSACSDEATSCPPIVSC 153
            +D  ++I +TT  ++A CG+++ +G EYL+DLY Y      +L +VG+CG  +SW ++ AD I  L       +PC  ACGE Q+C +  D  +          G  F C DTC    C  +E C L  + C++    CPP+  C
Sbjct:   60 VDYPVEIEVTTSASAADCGVYLQVGGEYLLDLYRYKG----ELRSVGACGATQSWTTLPADRIATLGDINRACHPC-AACGESQDCLLYTDGDSTTTSSSVTGGGKEFYCADTCAAGVCGAEETCYLNEAHCTEGP--CPPVAEC 197
[Close]
BLAST of mRNA_H-elongata_contig7320.14998.1 vs. uniprot
Match: D7G2B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B7_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 4.030e-16
Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 0 
Query:   20 IDGTMDISLTTGGNSALCGIFMDIGEEYLIDLY-YNSYDDDQLAAVGSCGIFRSWDSITADDIELL---DSGCDDYYPCGVACGEFQECKMSFDFYA----------GPSFDCIDTCDPSPCAEDEVCELLSSACSDEATSCPPIVSC 153
            +D  ++I +TT  ++A CG+++ +G EYL+DLY Y      +L +VG+CG  +SW ++ AD I  L   +S CD   PC  ACGE Q+C +  D  +          G  F C DTC    C  +E C L  S C+     CPP+  C
Sbjct:   48 VDYPVEIEVTTSASAAHCGVYLQVGGEYLLDLYRYKG----ELRSVGACGATQSWTTLPADRIATLGDINSACD---PC-AACGESQDCLLYTDGDSTTTXXXVTGGGEEFYCADTCAAGVCGAEETCYLNESDCTGGP--CPPVAEC 185
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7320.14998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCN7_ECTSI3.310e-2141.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAS0_9PHAE2.740e-1634.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2B7_ECTSI4.030e-1636.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001820Protease inhibitor I35 (TIMP)PFAMPF00965TIMPcoord: 2..106
e-value: 2.4E-6
score: 27.5
NoneNo IPR availableGENE3D2.40.50.120coord: 1..89
e-value: 9.2E-6
score: 27.8
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 2..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7320contigH-elongata_contig7320:268..1146 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7320.14998.1mRNA_H-elongata_contig7320.14998.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7320 241..1146 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7320.14998.1 ID=prot_H-elongata_contig7320.14998.1|Name=mRNA_H-elongata_contig7320.14998.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp
MYQVESLDVFKGGGDDTSYIDGTMDISLTTGGNSALCGIFMDIGEEYLID
LYYNSYDDDQLAAVGSCGIFRSWDSITADDIELLDSGCDDYYPCGVACGE
FQECKMSFDFYAGPSFDCIDTCDPSPCAEDEVCELLSSACSDEATSCPPI
VSC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001820TIMP
IPR008993TIMP-like_OB-fold