prot_H-elongata_contig73196.14997.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73196.14997.1
Unique Nameprot_H-elongata_contig73196.14997.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length170
Homology
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BLAST of mRNA_H-elongata_contig73196.14997.1 vs. uniprot
Match: A0A6H5JLN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.590e-18
Identity = 61/154 (39.61%), Postives = 81/154 (52.60%), Query Frame = 0 
Query:    1 MDAQADEFCLVDPLVSMHGDESQEHIISQHVDGIVFAPPLSNAPGTPVPRLAGXXXP----------NANGENGAITVPSVLADDELWGPPAGARRPYEARGTAAAA---------AGAAAARTVSPPWGRTDSFGGRGAGSVGAFGGGSLASD 135
            M  QADEFCLV+PL ++  +  Q     +  + +VFAP  + AP TP P LAG              ++N  N +  V SVLADDELWGPPAGARRP++ARG                 A+ R +SPPW     +GG  +G  G   GG+ A++
Sbjct:    1 MSGQADEFCLVEPLAAVGINPGQSPGQPRGAECVVFAPAPTAAPNTPAPLLAGTSTNANSCLNGNGGSSNSSNSSGVVHSVLADDELWGPPAGARRPFQARGXXXXXXXXXXXXXXGAVASRRAISPPWTGNIDYGGGCSGGAGRVDGGASAAE 154
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73196.14997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JLN2_9PHAE3.590e-1839.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73196contigH-elongata_contig73196:774..2855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73196.14997.1mRNA_H-elongata_contig73196.14997.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73196 729..2855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73196.14997.1 ID=prot_H-elongata_contig73196.14997.1|Name=mRNA_H-elongata_contig73196.14997.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp
MDAQADEFCLVDPLVSMHGDESQEHIISQHVDGIVFAPPLSNAPGTPVPR
LAGTPIPNANGENGAITVPSVLADDELWGPPAGARRPYEARGTAAAAAGA
AAARTVSPPWGRTDSFGGRGAGSVGAFGGGSLASDDDEDEEGEEELGSRS
PGSADRSVNSPRPPGSRAEE
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