prot_H-elongata_contig73184.14996.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig73184.14996.1
Unique Nameprot_H-elongata_contig73184.14996.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length551
Homology
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: A0A2Z6QM80_9GLOM (Uncharacterized protein n=7 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6QM80_9GLOM)

HSP 1 Score: 95.5 bits (236), Expect = 6.000e-17
Identity = 77/256 (30.08%), Postives = 131/256 (51.17%), Query Frame = 0
Query:    1 MKIAAHVAQHELPVSTFASHVELVR--DCEGNTFPDKT--YENDVGAWQLLQALEEQYLKQLHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGEKHVSPQAFIKIRFLSRGTAVAAL 252
            MKI   +A++++ ++  +  V+L R   C        T  YEN+V   ++L A+     + +  +L ++   G+ +DESTD S   ++ + V Y +  + +V  L L  + + D+ T          I +A+ D+ +   GLT  KLM FASDGAS M+G++ G A+ + + N  L  THC+AHR +LA +S    VD    A+ ++  +  + S SS R   L+   E +G   +  +   ++R+LS   AV  L
Sbjct:  138 MKIIFWLAENDISLNKLSEVVKLCRILGCPQLISASSTINYENNVSGREILSAISISIEETIWNELNEAIAFGIMVDESTDISSEPHLIIYVKYCLHGKIKVRFLKLLQLKSKDSKT----------IFEAIIDLFDKK-GLT-NKLMSFASDGASVMLGRSTGVASRIKERNECLFITHCIAHRLALACNSAEKKVDFCKHAEHIIKSVYNFFSNSSKRVDILRKYQEILGHPILKIKQIYEVRWLSWYEAVKNL 381          
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: A0A8H3QK06_9GLOM (Zinc finger protein 862-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3QK06_9GLOM)

HSP 1 Score: 94.0 bits (232), Expect = 1.110e-16
Identity = 73/248 (29.44%), Postives = 127/248 (51.21%), Query Frame = 0
Query:    1 MKIAAHVAQHELPVSTFASHVELVR--DCEGNTFPDKT--YENDVGAWQLLQALEEQYLKQLHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGEKHVSPQAFIKIRFLS 244
            MKI   +A++++ ++  +  ++L R   C        T  YEN+V   ++L A+     K +  +L ++   G+ +DESTD S   +  + V Y +  + +V  L L  + + D+ T          I +A+ D+ +   GLT  KLM FASDGAS M+G++ G A+ + + N +L   HC+AHR +LA +S    VD    A+ ++  +  + S SS R   L+   E +G   +  +   ++R+LS
Sbjct:  138 MKIIFWLAENDISLNKLSEVIKLCRILGCPQLISASSTINYENNVSGREILSAISILIEKTIWNELNEAIAFGIMVDESTDISSEPHFIIYVKYCLHRKIKVRFLKLLQLKSKDSKT----------IFEAIIDLFDKK-GLT-NKLMSFASDGASVMLGRSTGVASRIKERNEYLFIIHCIAHRLALACNSAEKKVDFCKHAEHIIKSVYNFFSNSSKRVDILRKYQEILGHPILKIKQIYEVRWLS 373          
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: A0A7D9HI41_PARCT (Zinc finger 862-like n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HI41_PARCT)

HSP 1 Score: 89.0 bits (219), Expect = 8.550e-15
Identity = 75/240 (31.25%), Postives = 108/240 (45.00%), Query Frame = 0
Query:   45 QLLQALEEQYLKQLHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGE------------------KHVSPQAFIKIRFLSRGTAVAALVKGYPVSLVFLKGE 266
            +LL +L E +L+++   L  S FIGL IDESTDRS   +I  VV Y      ++    LK    +   T     A  E +KK + D       + V KL G   DGAS M     G   LL +ENP LI  HC+ HR  LA S     +        +++ +  +++ S  R    KNLA+ +G                   K++  +    IR+LS G AV A++  Y   L+ L+ E
Sbjct:  343 ELLHSLSEVFLRKMLNHLNSSPFIGLGIDESTDRSQEKHIAAVVRYVDSNETKIKTSFLK----LSVITSGTAPAIVEAVKKILGDF-----SIPVNKLTGLGIDGASVMASDMNGVLGLLQRENPFLIGIHCINHRLHLAVSKAAKDIKNVNTLSTILSTIYQHVNNSPNRLQKFKNLADVLGAINHDNAPEEGNENIAPSLKYLKFKRIFDIRWLSVGEAVKAVIHNYQPLLILLEEE 573          
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: A0A7D9I064_PARCT (Zinc finger 862-like n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I064_PARCT)

HSP 1 Score: 86.7 bits (213), Expect = 2.640e-14
Identity = 74/240 (30.83%), Postives = 107/240 (44.58%), Query Frame = 0
Query:   45 QLLQALEEQYLKQLHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGE------------------KHVSPQAFIKIRFLSRGTAVAALVKGYPVSLVFLKGE 266
            +LL +L E + +++   L  S FIGL IDESTDRS   +I  VV Y      ++    LK    +   T     A  E +KK + D       + V KL G   DGAS M     G   LL +ENP LI  HC+ HR  LA S     +        +++ +  +++ S  R    KNLA+ +G                   K++  +    IR+LS G AV A++  Y   L+ L+ E
Sbjct:  233 ELLHSLSEVFQRKMLNHLNSSPFIGLGIDESTDRSQEKHIAAVVRYVDSNETKIKTSFLK----LSVITSGTAPAIVEAVKKILGDF-----SIPVNKLTGLGIDGASVMASDMNGVLGLLQRENPFLIGIHCINHRLHLAVSKAAKDIKNVNTLSTILSTIYQHVNNSPNRLQKFKNLADVLGAINHDNAPEEGNENIAPSLKYLKFKRIFDIRWLSVGEAVKAVIHNYQPLLILLEEE 463          
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: A0A7D9JHE5_PARCT (Zinc finger 862-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JHE5_PARCT)

HSP 1 Score: 81.6 bits (200), Expect = 2.410e-13
Identity = 70/223 (31.39%), Postives = 97/223 (43.50%), Query Frame = 0
Query:   62 LQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGE------------------KHVSPQAFIKIRFLSRGTAVAALVKGYPVSLVFLKGE 266
            L  S FIGL IDESTDRS   +I  VV Y      ++    LK    +   T     A  E +KK + D       + V KL G   DGAS M     G   LL +ENP LI  HC+ HR  LA S     +        +++ +  +++ S  R    KNLA+ +G                   K++  +    IR+LS G AV A++  Y   L+ L+ E
Sbjct:    5 LNSSPFIGLGIDESTDRSQEKHIAAVVRYVDSNETKIKTSFLK----LSVITSGTAPAIVEAVKKILGDF-----SIPVNKLTGLGIDGASVMASDMNGVLGLLQRENPFLIGIHCINHRLHLAVSKAAKDIKNVNTLSTILSTIYQHVNNSPNRLQKFKNLADVLGAINHDNAPEEGNENIAPSLKYLKFKRIFDIRWLSVGEAVKAVIHNYQPLLILLEEE 218          
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: UPI001E1E0729 (zinc finger protein 862-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E0729)

HSP 1 Score: 81.3 bits (199), Expect = 5.930e-13
Identity = 74/264 (28.03%), Postives = 121/264 (45.83%), Query Frame = 0
Query:    1 MKIAAHVAQHELPVSTFASHVELVRDCEGNTFPDK---------TYENDVGAWQLLQALEEQYLKQLHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHY-EVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGEKHVSPQAFIKIRFLSRGTAVAALVK 254
            +K    +AQ  +P++ F S  EL R+ +    PD           YE+   + ++L A+      +++ KL QS +I +  DESTD ++   I +          P++  L+           HE    TG  +   +   L+    ++V +L+GF SDGAS M G N G   +L ++ PHLI  HC+AHR +L  S     V       + +T +  Y S+SS R+  L  L E +    +  +    +R+LS   AV A+ +
Sbjct:   42 IKTVLWLAQENIPLNKFESIFELFRELD---VPDLEPLRLNKRVNYESYYTSTEILGAISCVIDNEINVKLAQSPYITVLADESTDLANKKRITLNARIVNGTSEPEIVFLS----------DHEYEDGTGIGLATVILQELQRRD-ISVDRLIGFGSDGASVMSGGNKGVKGILLQKQPHLIHIHCMAHRLALCTSKAADLVPAIKCYQQWLTSLYYYFSQSSSREQELHKLQEILESPTLKYKEIHAVRWLSVYQAVEAIYR 291          
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: A0A1V9YIA3_9STRA (DUF4371 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIA3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 9.350e-13
Identity = 73/232 (31.47%), Postives = 110/232 (47.41%), Query Frame = 0
Query:   36 TYENDVGAWQLLQALEEQYLKQLHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEAT---PGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGEKHVSPQAFIKIRFLSRGTAVAALVKGYPVSLVFLK 264
            TY  +  A +++       L      ++ +++  + +DESTD + S N+ M++ +         MLAL            V  A G    K + DV+ AT     L +  L+GFASDGAS M+G+  G AT L K  P ++++HC AHR SLA       +D    A   +  +  YLSKS  R+   K LAE  G + + P      R+LSRG  +A   + +P   + LK
Sbjct:  160 TYTTNTSAGEMVAVCRTSVLAATLAAVRLAKYFSVMVDESTDIASSKNLIMMLRFVHGATVATRMLAL------------VELADGTA--KTIVDVILATLEKHDLDIANLVGFASDGASVMIGRIKGVATWLEKLAPRVVASHCCAHRLSLATEDAEGPLDEAAIA--CIMTVYKYLSKSEPRR---KQLAE-AGTRTLKPLQGAVTRWLSRGHILANAFENFPALCIVLK 371          
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: A0A8H3L5C8_9GLOM (Zinc finger protein 862-like n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3L5C8_9GLOM)

HSP 1 Score: 76.3 bits (186), Expect = 3.340e-12
Identity = 58/208 (27.88%), Postives = 106/208 (50.96%), Query Frame = 0
Query:   37 YENDVGAWQLLQALEEQYLKQLHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGEKHVSPQAFIKIRFLS 244
            YEN+V   ++L A+     + +  +L ++    + +DESTD S   ++ + V Y +  + +V  L L  + + D+ T          I + + D+ +   GLT  KL+ FASDG S M+G++   A+ + + N  L  THC+A+R +LA +S    +D    A+ ++  +  + S SS R   L+   E +G   +  +   ++R+LS
Sbjct:   13 YENNVSGHEILSAISILIEETIWNELNEAIAFDIMVDESTDISSKPHLIIYVKYCLHGKIKVHFLKLLQLKSKDSKT----------IFEVIIDLFDKK-GLT-NKLISFASDGVSVMLGRSTEVASRIKERNECLFITHCIAYRLALACNSAEKKMDFCKHAEHIIKSVYNFFSNSSKRVDILRKYQEILGHPILKIKQIYEVRWLS 208          
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: A0A8C5FLG9_GADMO (Uncharacterized protein n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5FLG9_GADMO)

HSP 1 Score: 77.0 bits (188), Expect = 2.660e-11
Identity = 60/218 (27.52%), Postives = 106/218 (48.62%), Query Frame = 0
Query:   47 LQALEEQYLKQLHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGEKHVSPQAFIKIRFLSRGTAVAALVKGYPVSLVFLK 264
            +QA+ E  ++ L E+++ S +  +Q+DE+TD +D +N+ + V YE +       L  + + T         R T E I + V  + + T GL   K +G  +DGA  M G++ G    + +  P +  THC  HR +LA     + +   L  D  V  +N ++    +       L ++MG +HV      ++R+LSRG  ++ L + +    VFL+
Sbjct:   28 IQAMSENVIQTLVERIKDSPYFSIQLDETTDVADLANLLVFVRYEYEKATHEDFLFCQSLQT---------RTTAEHIFQLVNALFQET-GLDWKKCVGVCTDGARAMTGRHSGVVARIREVAPDVQWTHCSIHREALAVKRMPAELKAVL--DTAVKAVN-FIKSRPMHARLFHVLCDEMGSEHVQLLLHTEVRWLSRGKVLSRLFELHREVQVFLQ 232          
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Match: UPI000C6F50AF (zinc finger BED domain-containing protein 5-like n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=UPI000C6F50AF)

HSP 1 Score: 75.9 bits (185), Expect = 5.420e-11
Identity = 59/207 (28.50%), Postives = 99/207 (47.83%), Query Frame = 0
Query:   58 LHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAMLALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDGASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEADKVVTEMNGYLSKSSLRKATLKNLAEKMGEKHVSPQAFIKIRFLSRGTAVAALVKGYPVSLVFLK 264
            L E+++ S +  +Q+DE+TD +D +N+ + V YE D   Q   +  + + T         R T E I + +   ++   GL   K +G  +DGA  M G+N   A  + +  P +  THC  HR +LA        DL    D  V  +N ++    +       L E+MG +HV      ++R+LSRG  ++ L + +   L+FL+
Sbjct:    9 LIERIKNSRYFAIQLDETTDVADLANLLIYVRYEYDGAAQEDFMFCQSLET---------RTTAEHIFQVLNAFMQEN-GLDWKKCVGVCTDGARAMTGRNSRVAARIREVAPEMRWTHCSIHREALAVKKMPD--DLKSVLDSAVKTVN-FIKARPMNARLFHVLCEEMGSEHVQLLLHTEVRWLSRGKVLSRLFELHREVLMFLQ 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig73184.14996.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2Z6QM80_9GLOM6.000e-1730.08Uncharacterized protein n=7 Tax=Rhizophagus clarus... [more]
A0A8H3QK06_9GLOM1.110e-1629.44Zinc finger protein 862-like n=1 Tax=Rhizophagus c... [more]
A0A7D9HI41_PARCT8.550e-1531.25Zinc finger 862-like n=3 Tax=Paramuricea clavata T... [more]
A0A7D9I064_PARCT2.640e-1430.83Zinc finger 862-like n=2 Tax=Paramuricea clavata T... [more]
A0A7D9JHE5_PARCT2.410e-1331.39Zinc finger 862-like n=1 Tax=Paramuricea clavata T... [more]
UPI001E1E07295.930e-1328.03zinc finger protein 862-like n=1 Tax=Mercenaria me... [more]
A0A1V9YIA3_9STRA9.350e-1331.47DUF4371 domain-containing protein n=1 Tax=Achlya h... [more]
A0A8H3L5C8_9GLOM3.340e-1227.88Zinc finger protein 862-like n=2 Tax=Rhizophagus c... [more]
A0A8C5FLG9_GADMO2.660e-1127.52Uncharacterized protein n=1 Tax=Gadus morhua TaxID... [more]
UPI000C6F50AF5.420e-1128.50zinc finger BED domain-containing protein 5-like n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 276..296
NoneNo IPR availableCOILSCoilCoilcoord: 341..361
NoneNo IPR availablePANTHERPTHR46880FAMILY NOT NAMEDcoord: 2..550
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 57..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig73184contigH-elongata_contig73184:267..2965 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig73184.14996.1mRNA_H-elongata_contig73184.14996.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig73184 240..2965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig73184.14996.1 ID=prot_H-elongata_contig73184.14996.1|Name=mRNA_H-elongata_contig73184.14996.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=551bp
MKIAAHVAQHELPVSTFASHVELVRDCEGNTFPDKTYENDVGAWQLLQAL
EEQYLKQLHEKLQQSEFIGLQIDESTDRSDSSNIFMVVHYEVDFRPQVAM
LALKPVHTIDANTHEVHRATGERIKKAVCDVLEATPGLTVGKLMGFASDG
ASCMVGKNVGTATLLAKENPHLISTHCVAHRGSLAASSTCSAVDLTLEAD
KVVTEMNGYLSKSSLRKATLKNLAEKMGEKHVSPQAFIKIRFLSRGTAVA
ALVKGYPVSLVFLKGEGGGCLVKKNNARLTEEIRALEAEAGEKRHQLGGL
AQNKATMERVRDVLLAPYGPNPSQEQMIVMGTVLQTMNPGIEKIATDISS
LQQTITSLEQQIAGKKLLFEVPPGGADKGTDTAASLYERMTSFRFMGILY
VLKDFLEVLNNLNKLFQFRLMTYDGLMTDLERAKRTIRVTFANGVKSFEY
KNLLRLLGGAGGEAGLRQRLSQEPQGFEVPFSGDPDVKIRISAADLEAVE
TAAKELGVKALDELTARFPDVGILKKCAVLDPQLIPQAEDEICEYGVEEI
E
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf