prot_H-elongata_contig7317.14995.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7317.14995.1
Unique Nameprot_H-elongata_contig7317.14995.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: D7FWP4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP4_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 7.220e-67
Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRTYCK KRCNKHTVHKVTQYK+GKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECK CKAKKQLVIARCKHFELGEKKQATGHQY
Sbjct:   35 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 138          
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: A0A835YP36_9STRA (Zinc-binding ribosomal protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP36_9STRA)

HSP 1 Score: 193 bits (491), Expect = 2.600e-62
Identity = 93/104 (89.42%), Postives = 100/104 (96.15%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRTYCK+K+C KHTVHKV+QYK+GKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVI RCKHFELGEKK+ATGH Y
Sbjct:    1 MVNVPKERRTYCKSKKCGKHTVHKVSQYKSGKASNFAQGKRRYDSKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKKATGHVY 104          
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: A0A7S2UXA0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA0_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.060e-61
Identity = 92/104 (88.46%), Postives = 98/104 (94.23%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRTYCKAK CNKHT+HKVTQYKAGKASNFAQGKRRYDHKQ+G+GGQTKPIFHKKAKTTKK+ LRLECKECK KKQLVI R KHFELGEKK++TG QY
Sbjct:    1 MVNVPKERRTYCKAKNCNKHTIHKVTQYKAGKASNFAQGKRRYDHKQKGYGGQTKPIFHKKAKTTKKIVLRLECKECKTKKQLVIKRTKHFELGEKKKSTGPQY 104          
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: F0YGF9_AURAN (RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGF9_AURAN)

HSP 1 Score: 191 bits (485), Expect = 2.140e-61
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKER+TYCKAK+C KHT HKVTQYKAGKASNFAQGKRRYD KQ GFGGQTKP+FHKKAKTTKKVTLRLECKECKAKKQL I RCKHFELGEKK+ TGH Y
Sbjct:    1 MVNVPKERKTYCKAKKCRKHTTHKVTQYKAGKASNFAQGKRRYDMKQMGFGGQTKPVFHKKAKTTKKVTLRLECKECKAKKQLTIKRCKHFELGEKKKTTGHTY 104          
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: W7TXG3_9STRA (60s ribosomal protein l44 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXG3_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.410e-58
Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MV +PKER+T+CK K+C KHTVHKVTQYKAGKASN+AQGKRRYD KQ+G+GGQTKPI HKKAKTTKKVTLRLECKECK KKQLVI R KHFELGEKK+ATGHQY
Sbjct:    1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKECKTKKQLVIKRTKHFELGEKKKATGHQY 104          
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: A0A7S3NIT2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIT2_9STRA)

HSP 1 Score: 182 bits (463), Expect = 4.700e-58
Identity = 89/100 (89.00%), Postives = 94/100 (94.00%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQAT 100
            MVNVPKERRTYCK K+C KHTVHKVTQYKAGKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKV LRLECKECKAKKQL I RCKHFELGEKK++T
Sbjct:    1 MVNVPKERRTYCKGKKCKKHTVHKVTQYKAGKASNFAQGKRRYDAKQQGYGGQTKPIFHKKAKTTKKVVLRLECKECKAKKQLCIKRCKHFELGEKKKST 100          
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: I6ZGD0_9STRA (Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp. KRS101 TaxID=797128 RepID=I6ZGD0_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.390e-57
Identity = 87/104 (83.65%), Postives = 95/104 (91.35%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRT+CK K+C KHTVHKVTQYKAGKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKVTLRLECKECK K Q+ + RCK FELG+KK+A GHQY
Sbjct:    1 MVNVPKERRTFCKGKQCRKHTVHKVTQYKAGKASNFAQGKRRYDRKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKTKCQIGLKRCKTFELGQKKEAAGHQY 104          
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: A0A485LSL1_9STRA (Aste57867_25253 protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LSL1_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.810e-57
Identity = 85/104 (81.73%), Postives = 96/104 (92.31%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVN+PKERRT+CK K+C KHTVHKVTQYKAGKAS FAQG RRY+ KQ+GFGGQTKP+FHKKAKTTKK+TLR+ECKECKAKKQL I R KHFELGEKK+++GHQY
Sbjct:    1 MVNIPKERRTFCKGKKCRKHTVHKVTQYKAGKASKFAQGARRYNEKQQGFGGQTKPVFHKKAKTTKKITLRMECKECKAKKQLPIKRTKHFELGEKKKSSGHQY 104          
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: A0A7R9UFU1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFU1_9STRA)

HSP 1 Score: 179 bits (455), Expect = 8.050e-57
Identity = 83/104 (79.81%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRTYCK+  C +H +HKVTQYK+GKASNFAQGKRRYDHKQ G+GGQTKPIFHKKAKTTKK+TLRLECK+CK+K  LV+ RCKHFE+GEKK+  GHQY
Sbjct:    1 MVNVPKERRTYCKSPICRRHELHKVTQYKSGKASNFAQGKRRYDHKQMGYGGQTKPIFHKKAKTTKKITLRLECKKCKSKSHLVVKRCKHFEIGEKKKTAGHQY 104          
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Match: A0A7S3LII2_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LII2_9STRA)

HSP 1 Score: 179 bits (455), Expect = 8.050e-57
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 0
Query:    1 MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 104
            MVNVPKERRT+CK K+C KHT+HKVTQYKAGKASNFAQGKRRYD KQ+G+GGQTKP+FHKKAKTTKKV +RLECK+CK K QL + RCKHFELGEKK  TGHQY
Sbjct:    1 MVNVPKERRTFCKGKKCLKHTMHKVTQYKAGKASNFAQGKRRYDRKQQGYGGQTKPVFHKKAKTTKKVVIRLECKDCKTKFQLRLKRCKHFELGEKKAPTGHQY 104          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7317.14995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWP4_ECTSI7.220e-6797.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YP36_9STRA2.600e-6289.42Zinc-binding ribosomal protein n=1 Tax=Tribonema m... [more]
A0A7S2UXA0_9STRA1.060e-6188.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YGF9_AURAN2.140e-6188.46RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelag... [more]
W7TXG3_9STRA3.410e-5884.6260s ribosomal protein l44 n=2 Tax=Monodopsidaceae ... [more]
A0A7S3NIT2_9STRA4.700e-5889.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
I6ZGD0_9STRA1.390e-5783.65Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp.... [more]
A0A485LSL1_9STRA2.810e-5781.73Aste57867_25253 protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A7R9UFU1_9STRA8.050e-5779.81Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3LII2_9STRA8.050e-5781.73Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000552Ribosomal protein L44ePFAMPF00935Ribosomal_L44coord: 19..94
e-value: 5.8E-34
score: 116.4
IPR000552Ribosomal protein L44ePANTHERPTHR1036960S RIBOSOMAL PROTEIN L36A/L44coord: 1..102
IPR000552Ribosomal protein L44ePROSITEPS01172RIBOSOMAL_L44Ecoord: 63..74
NoneNo IPR availableGENE3D3.10.450.80coord: 1..104
e-value: 1.2E-47
score: 162.7
NoneNo IPR availablePANTHERPTHR10369:SF360S RIBOSOMAL PROTEIN L36Acoord: 1..102
NoneNo IPR availablePRODOMPD002841coord: 10..93
e-value: 8.0E-33
score: 345.0
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 2..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7317contigH-elongata_contig7317:2387..4221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7317.14995.1mRNA_H-elongata_contig7317.14995.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7317 2357..4221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7317.14995.1 ID=prot_H-elongata_contig7317.14995.1|Name=mRNA_H-elongata_contig7317.14995.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MVNVPKERRTYCKAKRCNKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGF
GGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQAT
GHQY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000552Ribosomal_L44e
IPR011332Ribosomal_zn-bd