prot_H-elongata_contig72868.14968.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: D8LE56_ECTSI (TFIIS-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE56_ECTSI) HSP 1 Score: 173 bits (439), Expect = 1.450e-52 Identity = 81/105 (77.14%), Postives = 93/105 (88.57%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKWVS 105
M+PKE+K +RKLM++C+RC ++E A+SG CVYRNN+I T GNKLDIVQTDV+DDPTLQRSKNAICEKCNYNEAVFFQADE + Q LSLIFVCTNR CGHKWVS
Sbjct: 134 MHPKENKTDRKLMYSCNRCKYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAK-SQSLSLIFVCTNRACGHKWVS 237
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: A0A835YYP5_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYP5_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.230e-32 Identity = 58/104 (55.77%), Postives = 77/104 (74.04%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKWV 104
++PKE++ R L +AC+RC ++E A C VY NN++ T KLDIV DV++DPTLQRSK+ IC++CNY+EAVFFQAD+ + L SLIFVCT+ CG KWV
Sbjct: 11 LHPKENRTTRTLFYACNRCAYREEAGQSC-VYENNLVKTTELKLDIVHEDVVNDPTLQRSKHQICDRCNYSEAVFFQADDSAKSSSL-SLIFVCTH--CGKKWV 110
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: A0A8B7CCB1_PHODC (DNA-directed RNA polymerase subunit n=3 Tax=Arecaceae TaxID=4710 RepID=A0A8B7CCB1_PHODC) HSP 1 Score: 99.4 bits (246), Expect = 7.530e-25 Identity = 50/103 (48.54%), Postives = 70/103 (67.96%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKW 103
+YPKE K ++ L+FAC C ++E A+S C VYRN + VG + I+Q DV +DPTL R+K+ C KC++ EAVFFQA R E+ ++L FVC N CG++W
Sbjct: 14 LYPKEDKQKKILLFACRNCDYEEVADSFC-VYRNEVHHAVGERTQILQ-DVANDPTLPRTKDVRCVKCDHPEAVFFQASS--RGEEGMTLFFVCCNPACGYRW 112
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: A0A843UFX2_COLES (TFIIS-type domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UFX2_COLES) HSP 1 Score: 102 bits (254), Expect = 1.130e-24 Identity = 51/103 (49.51%), Postives = 69/103 (66.99%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKW 103
+YPKE + ++ L++AC C QE A++ C VYRN I +VG + ++Q DV DPTL R+KN C KCN+ EAVFFQA R E+ ++L FVC N CGH+W
Sbjct: 140 LYPKEDREQKILLYACRNCDHQEVADNNC-VYRNEIHHSVGERTQVLQ-DVAADPTLPRTKNVRCAKCNHPEAVFFQA--AARGEEGMTLFFVCCNPSCGHRW 238
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: A0A162QY43_MUCCL (DNA-directed RNA polymerase subunit n=5 Tax=Mucor TaxID=4830 RepID=A0A162QY43_MUCCL) HSP 1 Score: 98.2 bits (243), Expect = 2.150e-24 Identity = 51/104 (49.04%), Postives = 69/104 (66.35%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKWV 104
+YP+E K ERKLMFAC C +QE AE+ CVYR+ I+ + ++ D+ DPTL R+ N C KC + EAVFFQ+ RR + ++L +VC NRGCGH+WV
Sbjct: 14 LYPREDKNERKLMFACRNCEYQEQAEN-VCVYRHEIVHAPSEQT-MMLADLSTDPTLPRA-NVQCAKCGHPEAVFFQSSS-RRADAKMTLFYVCGNRGCGHRWV 113
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: A0A199V8C1_ANACO (DNA-directed RNA polymerase subunit n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199V8C1_ANACO) HSP 1 Score: 97.4 bits (241), Expect = 4.440e-24 Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKW 103
+YPKE + + L+FAC C QE +++ C VYRN ++ +VG + I+Q DV DPTL R+K C C + EAVFFQA R E+ ++L FVC N CGH+W
Sbjct: 14 LYPKEDRERKILLFACRNCEHQEVSDNNC-VYRNEVLHSVGERTQILQ-DVASDPTLPRTKTVRCAACGHPEAVFFQAPS--RGEEGMTLFFVCCNPNCGHRW 112
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: A0A7M7GJD4_APIME (DNA-directed RNA polymerase subunit n=71 Tax=Pterygota TaxID=7496 RepID=A0A7M7GJD4_APIME) HSP 1 Score: 97.4 bits (241), Expect = 6.740e-24 Identity = 49/104 (47.12%), Postives = 68/104 (65.38%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKWV 104
+YPKE K + LM+AC C F++ A+S C +Y N I+ + IV DVI DPTL R+++ C KCN+ EAVFFQA + RR E+ + L +VCTN+ C H+W
Sbjct: 29 LYPKEDKENKVLMYACRNCDFKQLADSNC-IYVNKIMHEIDELTHIV-ADVISDPTLPRTEDHPCPKCNHREAVFFQA-QTRRAEEEMRLYYVCTNQHCCHRWT 129
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: A0A8H7UCI9_9FUNG (DNA-directed RNA polymerase subunit n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7UCI9_9FUNG) HSP 1 Score: 96.7 bits (239), Expect = 8.690e-24 Identity = 49/104 (47.12%), Postives = 68/104 (65.38%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKWV 104
+YP+E K RKL+FAC C F+E A++ C VYR+ I+ + +V TD+ DPTL R+ A C +C Y EAVFFQ+ RR + ++L +VC NR CGH+WV
Sbjct: 14 LYPREDKTNRKLLFACRNCHFEEDADNNC-VYRHEIVHAPSEQT-MVLTDLSADPTLPRTTTA-CPRCGYQEAVFFQS-AARRADTKMTLFYVCCNRACGHRWV 113
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: UPI001D0951AA (DNA-directed RNA polymerase II subunit RPB9 n=1 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D0951AA) HSP 1 Score: 96.7 bits (239), Expect = 1.430e-23 Identity = 48/104 (46.15%), Postives = 67/104 (64.42%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKWV 104
+YPKE K + L++AC C +++ A+S C +Y N I+ + IV DV+ DPTL RS++ C KCNY EAVFFQA + RR E+ + L +VCTN C H+W
Sbjct: 31 LYPKEDKENKVLLYACRNCDYKQLADSNC-IYVNKIMHEIDELTHIVP-DVVSDPTLPRSEDHHCPKCNYREAVFFQA-QTRRAEEEMRLYYVCTNPQCTHRWT 131
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Match: A0A4Y7LS89_9CRUS (DNA-directed RNA polymerase subunit n=1 Tax=Eubosmina coregoni TaxID=186181 RepID=A0A4Y7LS89_9CRUS) HSP 1 Score: 96.3 bits (238), Expect = 1.720e-23 Identity = 48/104 (46.15%), Postives = 69/104 (66.35%), Query Frame = 0
Query: 1 MYPKESKAERKLMFACSRCTFQEAAESGCCVYRNNIIPTVGNKLDIVQTDVIDDPTLQRSKNAICEKCNYNEAVFFQADEVRRHEQLLSLIFVCTNRGCGHKWV 104
+YPKESK +R L++AC C +++ A++ C VY N I+ + IV DVI DPTL R+++ C KCN++EAVFFQ+ RR E+ + L +VCTN C H+W
Sbjct: 25 LYPKESKEDRTLLYACRNCDYKQLADNHC-VYVNKIMHEIDELTQIV-ADVISDPTLPRTEDHPCPKCNHSEAVFFQSQS-RRAEEEMRLYYVCTNGNCTHRWT 125 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72868.14968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig72868.14968.1 ID=prot_H-elongata_contig72868.14968.1|Name=mRNA_H-elongata_contig72868.14968.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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