prot_H-elongata_contig72831.14962.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72831.14962.1
Unique Nameprot_H-elongata_contig72831.14962.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: A0A6H5JD86_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JD86_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.710e-36
Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 0
Query:    2 GDAKLGQAGHPRCEFCKTRYYDATALHDHLVKDHYSCHICEKRGVYHKYYKDYTDLERHFRSDHHLCEQARILQ 75
            GD +LGQ GHPRCEFCKTR+YDA  LHDHLVKDHYSCHICEK+G+ HKYY+DYTDLERHFRS+H LCE+   LQ
Sbjct:  174 GDPQLGQTGHPRCEFCKTRFYDAAQLHDHLVKDHYSCHICEKQGILHKYYRDYTDLERHFRSEHFLCEEEECLQ 247          
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: A0A7S0SUL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUL2_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.080e-24
Identity = 42/68 (61.76%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    7 GQAGHPRCEFCKTRYYDATALHDHLVKDHYSCHICEKRGVYHKYYKDYTDLERHFRSDHHLCEQARIL 74
            G  GHP CEFCK RYYD  AL  HL KDH +CH+CE +G+ H++YKDYT+LE HFRS H LCE    L
Sbjct:  137 GSIGHPNCEFCKHRYYDREALFLHLRKDHLTCHLCESKGIQHRFYKDYTNLEAHFRSKHFLCENVNCL 204          
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: A0A4D9DA00_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA00_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.220e-21
Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    1 QGDAKLGQAGHPRCEFCKTR-YYDATALHDHLVKDHYSCHICEKR-GVYHKYYKDYTDLERHFRSDHHLCEQARIL 74
            QG+   G  GHP C FCK R +YD  AL++HL KDHYSC +CE+  G+ H+YY+DY DLERHFR  H LCE  R L
Sbjct:  203 QGNPARGFYGHPACNFCKKRRFYDTGALYEHLHKDHYSCDLCERHAGIQHRYYRDYPDLERHFRDTHFLCEDPRCL 278          
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: B7G8U2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8U2_PHATC)

HSP 1 Score: 94.4 bits (233), Expect = 7.910e-21
Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    1 QGDAKL-GQAGHPRCEFCK-TRYYDATALHDHLVKDHYSCHICEKRGVYHKYYKDYTDLERHFRSDHHLCEQARILQA 76
            +GD  + G  GHP CEFC+  R+YD T LH HL KDHY CH+CEK+G++++++  Y  LERHF S H LC+  + LQA
Sbjct:  210 KGDGPMSGFEGHPACEFCRGRRFYDITELHQHLNKDHYKCHVCEKQGLHNQFFSTYQSLERHFDSQHFLCKDVQCLQA 287          
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: A0A8K1FHA1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHA1_PYTOL)

HSP 1 Score: 94.4 bits (233), Expect = 8.000e-21
Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    1 QGDAKLGQAGHPRCEFCKTRYYDATALHDHLVKDHYSCHICEK-RGVYHKYYKDYTDLERHFRSDHHLCEQARIL 74
            +G+ K G  GHPRC+FC TR+Y  T L DHL K+HY C IC + +GV ++YYKDY DLE HFR++H LCE+   L
Sbjct:  861 KGNPKEGFMGHPRCDFCFTRFYSNTELFDHLHKNHYECDICVRSQGVQNRYYKDYHDLENHFRAEHFLCEEPECL 935          
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: A0A482S3F5_9ARCH (RING-type domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3F5_9ARCH)

HSP 1 Score: 92.0 bits (227), Expect = 1.350e-20
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    7 GQAGHPRCEFCKTRYYDATALHDHLVKDHYSCHICEKRGVYHKYYKDYTDLERHFRSDHHLCEQARILQ 75
            G  GHP CEFCKTR+YD+TAL  HL K+HY+C +CE+RG+  +Y+  Y  +E HFR  H+LCE+   L+
Sbjct:  185 GSIGHPNCEFCKTRFYDSTALFLHLTKEHYTCFLCEQRGIRFRYFHTYQHVETHFRKAHYLCEEHGCLE 253          
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: A0A1Z5JIK2_FISSO (RING-type domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIK2_FISSO)

HSP 1 Score: 93.2 bits (230), Expect = 1.990e-20
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    1 QGDAKLGQAGHPRCEFCK-TRYYDATALHDHLVKDHYSCHICEKRGVYHKYYKDYTDLERHFRSDHHLCEQARILQA 76
            +GD   G  GHP CEFC+ TR+YD TALH HL  +H+ CH+CEK+G+  +Y+K+Y+ LE+HF   H LC   + L A
Sbjct:  213 RGDPAAGFHGHPLCEFCRPTRFYDITALHHHLALEHFKCHVCEKQGLSDQYFKNYSQLEKHFDRQHFLCRDVQCLMA 289          
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: A0A024UQB2_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQB2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 5.110e-20
Identity = 40/77 (51.95%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    1 QGDAKLGQAGHPRCEFCKTRYYDATALHDHLVKDHYSCHIC-EKRGVYHKYYKDYTDLERHFRSDHHLCEQARILQA 76
            QG+ + G  GHP+C+FC + YY    LH+HL K HY C IC    G+ ++YYKDY D+E HFRSDH LCE+   L A
Sbjct:  173 QGNPEEGFNGHPKCDFCSSSYYGNNELHEHLRKHHYECEICLHAYGIENRYYKDYNDMENHFRSDHFLCEEPSCLAA 249          
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: A0A485L9N1_9STRA (Aste57867_18171 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9N1_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 9.540e-20
Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    2 GDAKLGQAGHPRCEFCKTRYYDATALHDHLVKDHYSCHIC-EKRGVYHKYYKDYTDLERHFRSDHHLCEQARILQA 76
            G+   G  GHP+C+FC+ R+Y  T L+DHL K+H+ C IC    G+ ++YYKDY D+E HFRSDH LCE+ + L A
Sbjct:  174 GNPDEGFNGHPKCDFCQNRFYGNTELYDHLRKNHFECEICLHAYGIENRYYKDYNDMENHFRSDHFLCEEPQCLAA 249          
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Match: A0A2D4C461_PYTIN (RING-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C461_PYTIN)

HSP 1 Score: 91.3 bits (225), Expect = 9.660e-20
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    1 QGDAKLGQAGHPRCEFCKTRYYDATALHDHLVKDHYSCHICEKR-GVYHKYYKDYTDLERHFRSDHHLCEQARIL 74
            +G+ + G AGHPRC+FC +R+Y  T L DHL K+H+ C IC +  GV ++YYKDY DLE HFR++H LCE+   L
Sbjct:  869 KGNPREGFAGHPRCDFCFSRFYSNTELFDHLHKNHFECDICVRSLGVQNRYYKDYPDLENHFRAEHFLCEEPSCL 943          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72831.14962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD86_9PHAE1.710e-3678.38RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S0SUL2_9STRA1.080e-2461.76Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A4D9DA00_9STRA1.220e-2157.89Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
B7G8U2_PHATC7.910e-2152.56Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A8K1FHA1_PYTOL8.000e-2156.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A482S3F5_9ARCH1.350e-2053.62RING-type domain-containing protein (Fragment) n=1... [more]
A0A1Z5JIK2_FISSO1.990e-2050.65RING-type domain-containing protein n=2 Tax=Fistul... [more]
A0A024UQB2_9STRA5.110e-2051.95RING-type domain-containing protein n=2 Tax=Aphano... [more]
A0A485L9N1_9STRA9.540e-2051.32Aste57867_18171 protein n=1 Tax=Aphanomyces stella... [more]
A0A2D4C461_PYTIN9.660e-2053.33RING-type domain-containing protein n=1 Tax=Pythiu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 12..35
e-value: 8.0
score: 14.1
coord: 36..65
e-value: 10.0
score: 13.1
NoneNo IPR availablePANTHERPTHR22938ZINC FINGER PROTEIN 598coord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72831contigH-elongata_contig72831:170..891 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72831.14962.1mRNA_H-elongata_contig72831.14962.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72831 170..891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72831.14962.1 ID=prot_H-elongata_contig72831.14962.1|Name=mRNA_H-elongata_contig72831.14962.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
QGDAKLGQAGHPRCEFCKTRYYDATALHDHLVKDHYSCHICEKRGVYHKY
YKDYTDLERHFRSDHHLCEQARILQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type