prot_H-elongata_contig72647.14933.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72647.14933.1
Unique Nameprot_H-elongata_contig72647.14933.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
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BLAST of mRNA_H-elongata_contig72647.14933.1 vs. uniprot
Match: A0A835Z1L4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 9.380e-15
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 0 
Query:    1 SELTSHCFGFPTRGFDPGNCVEAVNNGHTPYLPMVAGDGAIDFTLHDLRGEAWSLSETLERTDAPVVMIWGMFT 74
            SELT  C+GFP   F+  NC++    G +P++ + AG  AIDFTL+DL G AW+LSE L     PV +IWGM T
Sbjct:    9 SELTDSCYGFPDDNFNGTNCIKCTY-GTSPHIVLDAGAAAIDFTLYDLDGAAWTLSEHL--ASQPVCLIWGMHT 79
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72647.14933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z1L4_9STRA9.380e-1550.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72647contigH-elongata_contig72647:1321..1542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72647.14933.1mRNA_H-elongata_contig72647.14933.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72647 1321..1542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72647.14933.1 ID=prot_H-elongata_contig72647.14933.1|Name=mRNA_H-elongata_contig72647.14933.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
SELTSHCFGFPTRGFDPGNCVEAVNNGHTPYLPMVAGDGAIDFTLHDLRG
EAWSLSETLERTDAPVVMIWGMFT
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