mRNA_H-elongata_contig72083.14884.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI) HSP 1 Score: 450 bits (1158), Expect = 6.140e-153 Identity = 227/334 (67.96%), Postives = 265/334 (79.34%), Query Frame = 1
Query: 1 GENPVHRRAALRNSFIFLAG--AGVAAAVRS-----ESAIAIGDLFEFKDQARFAQHATLQVPDMAAALKFYVQGVGMKVLRTRAGPQFNTTVVGFGPEPLQVPPDFVFGVSSMGSYGSHFTLELNSQE-----GREGEEDVEVYYDPGNGVQYLQIAVDTYRISSVIKAGGVVESGYGYLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLARAPGSPFEPDQPQNSVFMAYEGEGFGVLLLPTRRGEYINPGSAFSLSVLVEDVDTIADDLGGTVNVDVVRGRKRSISVPDPDGYLITFVDYGDWKNELASL 966
G P R LRNS FLAG A +AAA + +A AIGDL+EFKDQARFAQHAT+QVPDMAAALKFYV GVGMKV+RTRAGP FNTTVVGFGPE L+VPP FVFGVSS YG HFTLELNSQ+ +GEEDV+ +YDPGNGVQ+LQIAVD+YRIS V+KAGG++ESGYGYLQVLAPGGLRL LLSG RRDPPMF+AVK KD+KRS++WYTDVAGMT+ P P AR GSPFEP+QP SVFMAYEGE FGV+L+P +G+ INPGS S++VL EDV+ IA+ LGG V+VD RG +S++V DPDGY + FV+Y DW+ +L L
Sbjct: 76 GAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRL 409
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 253 bits (646), Expect = 2.410e-76 Identity = 149/297 (50.17%), Postives = 190/297 (63.97%), Query Frame = 1
Query: 88 ESAIAIGDLFEFKDQARFAQHATLQVPDMAAALKFYVQGVGMKVLRTRA--GPQFNTTVVGFGPEPLQVPPDFVFGVSSMGSYGSHFTLELNSQEGREGEEDVEVYYDPGNGVQYLQIAVDTYRISSVIKAGGVVESGYGYLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLAR-APGSPFEPDQPQNSVFMAYEGEGFGVLLLPTRRGEY--INPGSAFS-LSVLVEDVDTIADDLGGTVNVDVVRGRKRSISV-PDPDGYLITFVDYGDWKNEL 957
E AIG+L E Q RF QHA + VPD+ AA++FY +G+GM+V+R+RA NTT V +GPE L VP D+ GVSS +YG HF+LEL + ++ +YDPGNGVQY+QIAVDTYRIS VI AGG V GY GGL++NL SG RRDP MFVA+K DLK+S++WYTDV GM+Q P P AR A S FEP QP+ SVFM Y+ +G GVLL+P + + I GSA+S L+VL DV+ +G + G S++V DPDGY V+Y D+ EL
Sbjct: 91 EGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLNPPADGELP-FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGY--------GGLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDVEDEGKRVGA-MYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA) HSP 1 Score: 198 bits (504), Expect = 1.600e-55 Identity = 106/230 (46.09%), Postives = 149/230 (64.78%), Query Frame = 1
Query: 82 RSESAIAIGDLFEFKDQARFAQHATLQVPDMAAALKFYVQGVGMKVLRTRAGPQFNTTVVGFGPEPLQVPPDFVFGVSSMGSYGSHFTLELNSQEGREGEEDVEVYYDPGNGVQYLQIAVDTYRISSVIKAGGVVESGYGYLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLARAPGSPFEPDQPQNSVFMAYEGEGFGVLLLPTRRGE 771
R +A AIG+L E+ RF QH + VPDMAAAL FY+ G+ M+VLR+R N+T VG+GPE L+ P + GVSS YG+HF LELN E + EE DPGN YLQ+AV + R+S + +AGG ++S YG++ V +PGGLR ++ G RRDP M +A+ D++++ +Y + GM + P PL+R P S +EP QP+ S F+A+ +GFG+LLLP + E
Sbjct: 54 RPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELN--EVLKTEEGDTPVLDPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKE 281
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA) HSP 1 Score: 192 bits (487), Expect = 4.560e-54 Identity = 106/253 (41.90%), Postives = 148/253 (58.50%), Query Frame = 1
Query: 85 SESAIAIGDLFEFKDQARFAQHATLQVPDMAAALKFYVQGVGMKVLRTRAGPQFNTTVVGFGPEPLQVPPDFVFGVSSMGSYGSHFTLELNSQEGREGEEDVEVYYDPGNGVQYLQIAVDTYRISSVIKAGGVVESGYGYLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLARAPGSPFEPDQPQNSVFMAYEGEGFGVLLLPTRRGEYINPGSAFS-LSVLVEDVDTIADD 840
S+ +IG+L EF D A+F QH ++V DM AAL+F ++G+ M VLRTR N T VG+GPE L P DFV GVSS YG HF+LEL S E+ +PG +QY+Q+A +IKAGG++ GYGY V+AP GL + + RDP ++A+K KD+K+SI +Y V GM +L + R S FEP QP+ SV M Y +LL+P R + I G+ F+ L+++ V+ I +
Sbjct: 26 SQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPT-TPLEQRKPFANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGKE 277
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC) HSP 1 Score: 187 bits (476), Expect = 6.890e-52 Identity = 120/305 (39.34%), Postives = 166/305 (54.43%), Query Frame = 1
Query: 103 IGDLFEFKDQARFAQHATLQVPDMAAALKFYVQGVGMKVLRTRAGPQF--NTTVVGFGPEPL---QVPPDFVFGVSSMGSYGSHFTLELNSQ----EGREGEEDVEVY---YDPGNGVQYLQIAVDTYRISSVIKAGGVVESGYGYLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLARA-PGSPFEPDQPQNSVFMAYEGEGFGVLLLPT----RRGEYINPGSAFS-LSVLVEDVDTIADDLGGTVNVDVVRGRKRSISVPDPDGYLITFVDYGDWKNELAS 963
+G L E ++ R+ QHA + VP M AL FY +G+GM+V+RTR P N T VG+GPE L +V F G+SS YG+HFTLEL + E + +ED + Y+PGNGVQ+LQIA+ R+S + + GG + YG+++V APGGL L ++ GERRDP MF KDL + +Y GM +LP AR P SP EP QPQ S +M Y + FG+LL+ + I GS F L++L +V L V + D GY + V+Y D++ EL+
Sbjct: 1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKELSD 305
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: A0A7S2UPT2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPT2_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.430e-24 Identity = 87/301 (28.90%), Postives = 139/301 (46.18%), Query Frame = 1
Query: 88 ESAIAIGDLFEFKDQARFA--QHATLQVPDMA---AALKFYVQGVGMKVLRTRAGPQFNTTVVGFGPEPLQVPPDFVFGVSSMGSYGSHFTLELNSQEGREGEEDVEVYYD-----PGNGVQYLQIAVDTYRISSVIKAGGVVESGYGYLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLARAPGSP--FEPDQPQNSVFMAYEGEGFGVLLLPTRRGEYINPGSAF-SLSVLVEDVDTIADDLGGTVNVDVVRGRKRSISVPDPDGYLITFVDYGDWKN 951
ES A+G L E D A Q T+ V D++ + ++F QG ++LR + T +GFGPE L P DFV VSS G H ++ + R + ++ Y PG + +LQ+AV YRIS ++ GG V +G++ V++P GL + + G DP MFVA+ ++ S +Y ++ G + P +R FEP QP SV+MA GVLL+P + + F S++++ + + S+ DP G I+F+ ++
Sbjct: 138 ESLAAMGSLPELSDPNTNAILQGVTVSVADLSQQESMIQFLTQGFSFQILRQQTTDSITDTWLGFGPEQLSTPSDFVVPVSSFAKNGGHASIHI-----RYDAKTMDAPYRKGDPVPGTSIAFLQVAVPAYRISQMVANGGNVLDAFGFVNVVSPCGLPMRGIVGIWPDPIMFVAINCDNVATSRDFYENL-GFQEQDYPYSRPSNGAGQFEPMQPLRSVYMAQSSNCMGVLLVPAEKRNKVKRNPIFQSMNIVYTPSSSTSSS-----------SESSPPSLVDPSGNTISFMSTNTFEE 421
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: A0A5B8MYG2_9CHLO (Putative glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO) HSP 1 Score: 111 bits (278), Expect = 4.970e-23 Identity = 90/282 (31.91%), Postives = 134/282 (47.52%), Query Frame = 1
Query: 139 FAQHATLQVPDMAAALKFYVQGVGMKVLRTRAGPQFNTTVVGFGPEPLQVPPDFVFGVSSMGSYGSHFTLELNSQEGREGEEDVEVYYDPGNGVQYLQIAV-DTYRISSVIKAGGVVESGYGYLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLARAPGSPFEPDQPQNSVFMAYEG--EGFGVLLLPTRRGEYINPGSAFSLSVLVEDVDTIADDLGG-------TVNVDVVRGRKRSISVPDPDGYLITFVDYGDWKNE 954
F QHA L+V D+ ++KF+ QG+GMKV RTR N V FGPE L + G F LEL E+ D N Q+ Q A+ ++ R++ V +GG + G+GY ++ AP G ++ + RRDP V V D+ + K+Y V GM + G FEP + + SV M Y E G+LL+P + + + ++VL +DV+ + L T V G K S++VP +G + FVDY D++ E
Sbjct: 154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRG----NQAFVSFGPETLTA------------ADGGKFALELV--------ENPSTTQD--NSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGTGGTKVSLAVPR-EGVPLVFVDYNDFERE 407
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: A0A8J5XKT4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT) HSP 1 Score: 92.8 bits (229), Expect = 9.460e-17 Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 1
Query: 157 LQVPDMAAALKFYVQGVGMKVLRT-RAGPQ-FNTTVVGFGPEPLQVPPDFVFGVSSMGSYGSHFTLELNSQEGRE--------GEEDVEVYYDPGNGVQYLQIAVDTYRISSVIKAGGVVESGYGYLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLARAPGSP 681
++VPD+AAA +F++ G+ M LR+ R GP VVG+G E L G F+LEL R D E + Y+Q+ V RIS ++++GG +ES YGY++V +PGGL + +++ RRDP FVA++ D++ + +Y GM ++P P R P
Sbjct: 131 VRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLDEDD------------GGKFSLELVQASARAPAPARLALDAPDAEA----AGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGP 299
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: A0A835Z3V5_9STRA (Metal ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V5_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 5.600e-15 Identity = 78/288 (27.08%), Postives = 137/288 (47.57%), Query Frame = 1
Query: 139 FAQHATLQVPDMAAALKFYVQGVGMKVLRTRAGPQFNTTVVGFGPEPLQVPPDFVFGVSSMGSYGSHFTLELNSQEGREGEEDVEVYYDPGNGVQYLQIAVDTYRISSVIKA----GGVVESGY---GYLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLARAPGSPFEPDQPQNSVFMAYEGEGFGVLLLPTRRGEYINPGSAFS-LSVLVEDVDTIADDLGGTV--NVDVVR-----GRKRSISVPDPDGYLITFVDYGDWKNEL 957
F QHA L+V D++A +KF+ +G+GMK++R R T + +G E L S G G +F LEL + + Y G+ +YL + + ++ I+A G +V + ++++ +P G+ + + SG RRDP VA + D+K + +Y D M + L + G P D P + Y+G V+L+ + + G F +++L ++ +AD + T V+ V G K + ++ DP+ + + FVDY D++ EL
Sbjct: 52 FIQHAVLKVNDLSANIKFWCEGLGMKLVRERTIDNVRTVFLAYGKETL-----------SSGD-GGYFALELTQAQ--------KPVYGVGSSFKYLGLTLPDKPMTLGIRATDAGGEIVPHWFLEKDFVEIKSPDGVPVRVKSGARRDPVTVVAFGSNDVKATQAYYKDTLRMKEQRGGLLKLLG-PLAGDGP----VLGYDGSDVSVVLV--KEDAPVTQGQIFDKIAILTKNTVGMADAISKTNYGKVEFVGEAPGIGTKVADTI-DPEFHDVVFVDYDDFEKEL 311
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Match: A0A6H5K0L5_9PHAE (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0L5_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 1.630e-13 Identity = 91/327 (27.83%), Postives = 140/327 (42.81%), Query Frame = 1
Query: 58 GAGVAAAVRSESAIAIGDLFEFKDQARFAQHATLQVPDMAAALKFYVQGVGMKVLRTRAGPQFNTTVVGFGPEPLQVPPDFVFGVSSMGSYGSHFTLELNSQEGREGEEDVEVYYDP--------GNGVQYLQIAVDTYRISSVIK---AGG-VVESGYG---YLQVLAPGGLRLNLLSGERRDPPMFVAVKAKDLKRSIKWYTDVAGMTQLPCPLARAPGSPFEPDQPQNSVFMAYEGEGFGVLLLPTRRGEYINPGSAFSLSVLVEDVDTIADDL---GG--TVNVDVVR-------GRKRSISVPDPDGYLITFVDYGDWKNEL 957
G G+A + S +A G F QHA +VPDM +KF+ +G+GMKV+R R V +G E LQ G +F+LEL YDP G QYL + + + + K AGG VV +G +++ +P G + + G+RRDP VA + ++ ++ +V GM + L + G P D + S Y+ G V L P + G+ L+VL +D +AD + GG T DV+ G K + ++ D +G + FVDY D++ E+
Sbjct: 75 GVGIAVSPGSSTAADGGAPKGLPASGYFVQHAVFKVPDMDEEVKFFTEGLGMKVVRQREVNGVRNVFVAYGDESLQTKD------------GGYFSLEL--------------VYDPKAPPGYSTGGPFQYLGLTLSSTLATIAYKVDAAGGTVVPHWFGTKDFVEATSPSGTTVRVKEGKRRDPFSVVAFGTQFPDKATAYFHNVLGMKEQDAGLLKVLG-PLAGDALRLS---GYDKAGVSVALNPVD-SKIFEGGTFGKLAVLTKDTKALADKVSASGGAKTGGGDVLFAGEVPGIGTKVANTI-DFEGRGVVFVDYDDFEGEM 369 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72083.14884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig72083.14884.1 >prot_H-elongata_contig72083.14884.1 ID=prot_H-elongata_contig72083.14884.1|Name=mRNA_H-elongata_contig72083.14884.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=266bp MAAALKFYVQGVGMKVLRTRAGPQFNTTVVGFGPEPLQVPPDFVFGVSSMback to top mRNA from alignment at H-elongata_contig72083:456..1909+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig72083.14884.1 ID=mRNA_H-elongata_contig72083.14884.1|Name=mRNA_H-elongata_contig72083.14884.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1454bp|location=Sequence derived from alignment at H-elongata_contig72083:456..1909+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig72083:456..1909+ >mRNA_H-elongata_contig72083.14884.1 ID=mRNA_H-elongata_contig72083.14884.1|Name=mRNA_H-elongata_contig72083.14884.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1596bp|location=Sequence derived from alignment at H-elongata_contig72083:456..1909+ (Himanthalia elongata Himel1 dioecious)back to top |