mRNA_H-elongata_contig71847.14861.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: D8LKX0_ECTSI (GpcrRhopsn4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKX0_ECTSI) HSP 1 Score: 346 bits (888), Expect = 2.740e-116 Identity = 173/204 (84.80%), Postives = 190/204 (93.14%), Query Frame = 1
Query: 1 SAAVNGRGMRMLDVIGEVLHWGGQLLVSYVLVGLAYGWTLSSKAVQKYVPDDKNIVYLLAGCLGFIHLMFVIFGRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNAVRRSFIGRLIVLGTLWFAAMPALVLVAMICAEYVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLAHTGMLPTNT-RID 609
S A NG G +LDV GEVLHWGGQLLVSYVLVGLAYGWTLSS+AVQKYVPDDK+IVYLLAGCLGF+HLMFVI GR+SD+H++KSH+LDS PAYFLVLVRLALL VFLLGA+KTFEAEQN+VRR FIGRL+VLG+LWFAAMP LVLVAMICAEYVQEPVV+VG +LAQSLGLSVL+WLFLTRNEYYKMSSLAHTGMLPTN R+D
Sbjct: 228 SFAANGTGYVLLDVGGEVLHWGGQLLVSYVLVGLAYGWTLSSRAVQKYVPDDKSIVYLLAGCLGFLHLMFVILGRMSDDHHAKSHSLDSAPAYFLVLVRLALLGVFLLGALKTFEAEQNSVRRGFIGRLVVLGSLWFAAMPVLVLVAMICAEYVQEPVVAVGSLLAQSLGLSVLSWLFLTRNEYYKMSSLAHTGMLPTNNFRMD 431
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: A0A7S4CD68_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CD68_9EUGL) HSP 1 Score: 112 bits (280), Expect = 1.410e-25 Identity = 69/216 (31.94%), Postives = 114/216 (52.78%), Query Frame = 1
Query: 7 AVNGRGMRM------LDVIGEVLHWGGQLLVSYVLVGLAYGWTLSSK------AVQKYV----------PDDKNIVYLLAGCLGFIHLMFVIFGRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNAVRRSFIGRLIVLGTLWFAAMPALVLVAMICAEYVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLAHTGML 588
+++GRG+R LD ++L +L++S+VL+ +A+GWTL++ A Q + P D + A L F+ ++ I GR ++ +++ H + P Y L+ +R+ L F LG + T ++A F+GRL +LGT WF A P LV+ Y + VV+ G + QS L + ++FL+R+EYYK+SSL+ G L
Sbjct: 228 SLDGRGLRFRHTWLALDFAADLLQGISELIISFVLICMAFGWTLTAPVSLIAGARQSGIMGGLAEIFGRPADLGAFLVFASIL-FVQVILQILGRQYEDDFTQFHDYEHAPGYTLMAMRVFLCLAFWLGTMTTIRGSRDANVAGFLGRLTLLGTTWFLAFPVLVVCTAFLPPYNRHSVVTSGAITMQSFALCLFLYMFLSRSEYYKISSLSKMGTL 442
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: S5CS41_EUGGR (G-protein-coupled-receptor n=1 Tax=Euglena gracilis TaxID=3039 RepID=S5CS41_EUGGR) HSP 1 Score: 107 bits (267), Expect = 9.910e-24 Identity = 68/210 (32.38%), Postives = 109/210 (51.90%), Query Frame = 1
Query: 13 NGRGMRM------LDVIGEVLHWGGQLLVSYVLVGLAYGWTLSSKA---VQKYVPDDKNIVYLLAGCLGFIHLMFVIF---------GRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNAVRRSFIGRLIVLGTLWFAAMPALVLVAMICAEYVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLAHTGML 588
+G+G+R LD + ++L +LL+S+VL+ +A+GWTLSS P ++ G + F IF GR ++ +++ H + P Y L+ +R+ F +G + T + +NA SF+GRL +GT WF A P LV+ A Y + VV+ G ++ QS L++ LFL+ +EYYK+SSL+ G L
Sbjct: 242 DGQGLRFRHTWLALDFLADMLQGLSELLISFVLICMAFGWTLSSPMSLITGARSPGGLAAIFSQPADAGAALVFFSIFLLQTVLQYLGRQYEDDFTQFHDYEHNPGYGLLALRVLSCVAFWIGTMGTIRSSRNADVASFLGRLTFIGTAWFLAFPILVISTSFMAPYNRHAVVAGGSIVLQSAALALFLKLFLSHSEYYKISSLSKMGTL 451
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: A0A813FXL4_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FXL4_POLGL) HSP 1 Score: 97.1 bits (240), Expect = 8.740e-20 Identity = 63/198 (31.82%), Postives = 111/198 (56.06%), Query Frame = 1
Query: 13 NGRGMRMLDVIGEVLHWGGQLLVSYVLVGLAYGWTLSSKAVQKYVPDDKNIVYLLAGCLGFIHLMFVIFGRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNAVRRSFIGRLIVLGTLWFAAMPALVLVAMICAEYVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLAHTGMLPTNTRI 606
+G G++ L+V+ E+L Q+ + +L+ + G+TL + + +++ + +G IH+M V FG++ D+ K H + P + L+ +RL L F L AV+ + + R+F+ + + G+++F A P + L A + A Y+Q V+SVG ML Q LA LFLTR EY+K+S+L+ + LP T++
Sbjct: 910 DGDGIKPLEVLSEILFMLSQVTQTSLLILIGLGYTLLQSRI-----GELDLMIPMCFMVGVIHIMLVGFGKIKDDAAYKFHENEGPVGWILLTMRLLLYGWF-LWAVQASARDGGSKVRNFLDQFRIAGSIYFLAYPTIFLAAKMFAPYLQHGVMSVGLMLMQGGSNLWLASLFLTRGEYFKVSTLSSSD-LPGGTKL 1100
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: A0A7R9SVE3_9CHLO (Hypothetical protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A7R9SVE3_9CHLO) HSP 1 Score: 92.4 bits (228), Expect = 1.770e-18 Identity = 63/227 (27.75%), Postives = 113/227 (49.78%), Query Frame = 1
Query: 13 NGRGMRM------LDVIGEVLHWGGQLLVSYVLVGLAYGWTLSSKAVQKYVP----------DDKNIVYLLA--GCLGFIHLMFVIFGRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNA----------------VRRSFIGRLIVLGTLWFAAMPALVLVAMICAE-YVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLAHTGML 588
+G+G+R D +V +LL+ ++L+ LA+GWTL K + VP + + +A G + ++ + GR ++ +++ H + PP Y L+ +R+ L A+FL+G + T + SF+ +L+V+G++WF A P LV+ A E Y + PVV+ G ++ QS+ L ++ LFL + Y K+S+LA+ G +
Sbjct: 174 DGKGLRWRHTTLATDFAAQVTLGLSELLIEFLLITLAFGWTLMPKG-EASVPLLGRFGLAMSSGSSWIIRMAFFGAIAMSQVVLAMLGRRYEDDFNQFHDFEHPPGYCLMALRVTLCALFLIGGLNTLKRSSGGNVASAGSGSTTPGAAVAVSSFMWKLLVMGSVWFLAFPVLVVCASPFFEPYNRHPVVTGGSIILQSVALGSISTLFLQNSSYLKLSTLANMGTI 399
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: A0A0V0QHZ3_PSEPJ (GpcrRhopsn4 domain-containing protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QHZ3_PSEPJ) HSP 1 Score: 89.7 bits (221), Expect = 1.530e-17 Identity = 55/197 (27.92%), Postives = 107/197 (54.31%), Query Frame = 1
Query: 1 SAAVNGRGMRMLDVIGEVLHWGGQLLVSYVLVGLAYGWTLSSKAVQKYVPDDKNIVYLLAGCLGFIHLMFVIFGRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNAVRRSFIGRLIVLGTLWFAAMPALVLVAMICAEYVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLAHTGMLP 591
S + NG+G+ +LD+ E+ L+S L+ +++GWT++ + D +++ LA +G I LM + G+L+DN SK H D Y ++++++ L F G + + + + +SFI +L G+L+F A+P L++++ A Y + ++++G +L Q+ VL +L ++ Y S+ G+LP
Sbjct: 210 SYSYNGQGLFVLDLFSEMTEVLSTFLLSVFLLLVSWGWTINYMEL-----DSFDVIVPLAILMGIIDLMIMGLGKLTDNSDSKYHLYDGWVGYVILVIQIGLFIYFQFG-LNNIKQKASIKLKSFIQQLSFFGSLYFLAIPILLVISWFFAFYDRNIIITLGTLLIQAAAFIVLIYLNTSQKSAYYKVSMKSQGILP 400
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: A0A7S1RV62_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RV62_ALECA) HSP 1 Score: 86.3 bits (212), Expect = 3.070e-16 Identity = 59/188 (31.38%), Postives = 104/188 (55.32%), Query Frame = 1
Query: 13 NGRGMRMLDVIGEVLHWGGQLLVSYVLVGLAYGWTLSSKAVQKYVPDDKNIVYLLAGCLGFIHLMFVIFGRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNAVRRSFI-GRLIVLGTLWFAAMPALVLVAMICAEYVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLA 573
NG G++ +DV E+ Q++ + +L+ +A G+TL + + +++ + + IH+M V FG+L D+ H + + L+++RL LL V+ L AV++ +E RSF+ G+ +G+L+F + PA+ LV A Y+Q V++VG Q+ L FLTR EY+K+S+L+
Sbjct: 253 NGAGLKAMDVFSEIFFILSQVIQTSLLILIALGYTLLQSCI-----GELDLMIPVCFMVAVIHVMLVGFGKLKDDSAYAFHENEGILGWILLVLRL-LLYVWFLWAVQSSASEGGTRLRSFLLGQFRAVGSLYFLSYPAIFLVTKCFAPYLQHGVMTVGLEAMQAASSVWLCMNFLTRGEYFKVSTLS 434
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: A0A6P4XIG1_BRABE (integral membrane protein GPR180-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XIG1_BRABE) HSP 1 Score: 80.5 bits (197), Expect = 3.240e-14 Identity = 52/188 (27.66%), Postives = 101/188 (53.72%), Query Frame = 1
Query: 13 NGRGMRMLDVIGEVLHWGGQLLVSYVLVGLAYGWTLS-SKAVQKYVPDDKNIVYLLAGCLGFIHLMFVIFGRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNAVRRSFIGRLIVLGTLWFAAMPALVLVAMICAEYVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLA 573
+G G + E+L L++ Y+L+ +A GWTL+ SKA + + IV ++ LG + + ++ + + + HA S LV++RL L VF +T E++++RR F LWF + P +V++A + +++ +V+ G ++ +SL + +L LFL+R+ Y+++S+L+
Sbjct: 223 DGEGSPFFLNLSEMLEVLSALVMLYMLLNVAMGWTLAGSKATKLSNLKNNPIVTIVVLGLGAVQAVLALWEQFQSSEHQTYHAHRSAVGLSLVVLRLVLALVFGGAIYQTMSKERSSLRRDFYLSFFKSCLLWFLSYPVIVVIAYLFPGHLRNKIVTSGVVICESLAVVLLYKLFLSRSLYWEVSALS 410
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: C3ZWY0_BRAFL (GpcrRhopsn4 domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZWY0_BRAFL) HSP 1 Score: 80.1 bits (196), Expect = 4.410e-14 Identity = 52/188 (27.66%), Postives = 101/188 (53.72%), Query Frame = 1
Query: 13 NGRGMRMLDVIGEVLHWGGQLLVSYVLVGLAYGWTLS-SKAVQKYVPDDKNIVYLLAGCLGFIHLMFVIFGRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNAVRRSFIGRLIVLGTLWFAAMPALVLVAMICAEYVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLA 573
+G G + E+L L++ Y+L+ +A GWTL+ SKA + + IV ++ LG + ++ ++ + + + HA S LV++RL L VF +T E++++RR F LWF P +V++A + +++ +V+ G ++ +SL + +L LFL+R+ Y+++S+L+
Sbjct: 222 DGEGSPFFLNLSEMLEVLSALVMLYMLLNVAMGWTLAGSKATKLSNLKNNPIVTIVVLGLGAVQVILALWEQFQSSEHQTYHAHRSAVGLSLVVLRLMLALVFGGAIYQTMAKERSSLRRDFYLSFFKSCLLWFLCYPVIVVIAYLFPGHLRNKIVTSGVVICESLAVVLLYKLFLSRSLYWEVSALS 409
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Match: A0A7S1A1W1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A1W1_NOCSC) HSP 1 Score: 77.8 bits (190), Expect = 2.790e-13 Identity = 55/199 (27.64%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 10 VNGRGMRMLDVIGEVLHWGGQLLVSYVLVGLAYGWTLSSKAVQKYVPDDKNIVYLLAGCLGFIHLMFVIFGRLSDNHYSKSHALDSPPAYFLVLVRLALLAVFLLGAVKTFEAEQNAVRRSFIGRLIVLGTLWFAAMPALVLVAMICAEYVQEPVVSVGGMLAQSLGLSVLAWLFLTRNEYYKMSSLAHTGMLPTNTRI 606
++G+G R +V+ E+L+ Q++ + +L+ ++ G+TLS + + +++ + +G +HLM V FG+L D + H + + +++RL LL ++ AV E R F+ + + G+++F P + L A + + Q +++VG ++ LA LFLTR EY+K+SSL+ + LP +I
Sbjct: 225 MDGQGARPFEVMAEMLYVISQVIQTSILLLISLGYTLSQSKI-----GELDLMIPVCFMIGVLHLMLVGFGKLKDEGSYRYHENEGIMGWLQLVLRL-LLYIWFSWAVGETSKEGGMKLRDFLVKFRIAGSVYFLITPTMFLFARQFSPHTQFFLMAVGTLVTNLASDVWLATLFLTRGEYFKVSSLSSSD-LPGGVKI 416 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71847.14861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71847.14861.1 >prot_H-elongata_contig71847.14861.1 ID=prot_H-elongata_contig71847.14861.1|Name=mRNA_H-elongata_contig71847.14861.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bp MRMLDVIGEVLHWGGQLLVSYVLVGLAYGWTLSSKAVQKYVPDDKNIVYLback to top mRNA from alignment at H-elongata_contig71847:1352..3016- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71847.14861.1 ID=mRNA_H-elongata_contig71847.14861.1|Name=mRNA_H-elongata_contig71847.14861.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1665bp|location=Sequence derived from alignment at H-elongata_contig71847:1352..3016- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71847:1352..3016- >mRNA_H-elongata_contig71847.14861.1 ID=mRNA_H-elongata_contig71847.14861.1|Name=mRNA_H-elongata_contig71847.14861.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1176bp|location=Sequence derived from alignment at H-elongata_contig71847:1352..3016- (Himanthalia elongata Himel1 dioecious)back to top |