prot_H-elongata_contig7158.14829.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7158.14829.1
Unique Nameprot_H-elongata_contig7158.14829.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length616
Homology
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BLAST of mRNA_H-elongata_contig7158.14829.1 vs. uniprot
Match: A0A6H5JDC8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC8_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.910e-23
Identity = 72/159 (45.28%), Postives = 96/159 (60.38%), Query Frame = 0 
Query:    1 MTFVFYDDEEDNENDKNEDQKGGVRGVQRRQKNEALEITVTIEK------KTGKEVDAPERDSPPRPRVIVTLGGPPDGAASDGARGLVRVPYEQFLMVYSGRASAREVINMAMEKKVQVTGFAAFMKFGFSFEYNKPTWRAYYAAKAKAHLSDEEGVG 153
            MTFVF     D E D  ED + G      R K E LE++VT+EK      K G+  D P      RPRV+VT GGPP GA    A+G VRVPY+ FL++YSG+A+A++++ +AM   V++TGFAAFM+FG SF+Y+  TW+ YY  KA    +     G
Sbjct:   18 MTFVF-----DQELD--EDMEDGTWDGVARDKPE-LELSVTVEKVGEDDVKNGEAGDLPRNR---RPRVLVTRGGPPVGAGE--AKGRVRVPYKHFLLMYSGKATAKDIVRLAMRGNVELTGFAAFMQFGLSFDYSSDTWQGYYDIKASLGATSAAAAG 163
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BLAST of mRNA_H-elongata_contig7158.14829.1 vs. uniprot
Match: D8LM62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM62_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 3.200e-12
Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = 0 
Query:    1 MTFVFYDDEEDNENDKNEDQKGGVRGVQRRQKNEALEITVTIEKKTGKEVDAPERDSPPR---PRVIVTLGGPPDGAASDGARGLVRVPYEQFLMVYSGRASAREVINMAMEKKVQV 114
            MTFVF       +   +ED + G      R K E LE++VT+EK    +V   E  +  R   PRV+VT GGPP GA    A+G VRVPY+QFL+VYSG+A+A++++ +AM  KV +
Sbjct:   19 MTFVF-------DQVLDEDMEDGSWDGVARDKPE-LELSVTVEKVEEDDVKNGEAGNVSRNRRPRVLVTRGGPPVGAGE--AKGRVRVPYKQFLLVYSGKATAKDIVRLAMRGKVSI 125
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7158.14829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDC8_9PHAE1.910e-2345.28Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LM62_ECTSI3.200e-1243.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 304..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7158contigH-elongata_contig7158:3155..10256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7158.14829.1mRNA_H-elongata_contig7158.14829.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7158 1511..10279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7158.14829.1 ID=prot_H-elongata_contig7158.14829.1|Name=mRNA_H-elongata_contig7158.14829.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=616bp
MTFVFYDDEEDNENDKNEDQKGGVRGVQRRQKNEALEITVTIEKKTGKEV
DAPERDSPPRPRVIVTLGGPPDGAASDGARGLVRVPYEQFLMVYSGRASA
REVINMAMEKKVQVTGFAAFMKFGFSFEYNKPTWRAYYAAKAKAHLSDEE
GVGQLQPFVHQRVCHQSQPFPQEATHASQPASQEDVDQSQPSFEGAANQL
QPSAQGDARTNASLPLHAARNPQTTPAHPYFPRNTPISAEGTAGNSISKV
ETTSVMLCLGRKDDNEVLPRASAKEKGGVRRDGADRDGTGEASAKRVLFS
SDRFRDMEAQRQRKEQLLELEQEQQPQELQLQRGDAHPSDVNTDGESDCD
DDDDSNDEEDGGRQSSGGSGDGSGGSGGISGLGGGASRWVAGWIRRRFPG
GGDRAPRDPLRSGDIGFRSTACLSRSPPLAPLKTQTLEGVFLPVWLGLGR
EVDLGRRPPDASSGRRSLRRTLQERKQKPLLSSAVVRVRSFKFNYGPAVL
DRPLLASRRVNKHKSPAAAGVAVASDKGLFLLAMTEPGVLRPKWEASPSW
QRGGGFVIGNYSSAACLGVTTAAAVGALIMLSCRGRGVGFDVGVGRGVDQ
LRRSLLLAPSLSRRV*
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