mRNA_H-elongata_contig71513.14814.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: D7FNM7_ECTSI (ABC1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM7_ECTSI) HSP 1 Score: 235 bits (600), Expect = 4.280e-75 Identity = 120/140 (85.71%), Postives = 126/140 (90.00%), Query Frame = 1
Query: 112 DPHGGNLLKTADNKLAYLDFGLVSIIPPRVMDALICATVQVMNRDYVSLAKGFPALALMDESDLARDFTPFAEALEGALDPIVTDFRRQMGMDEMLG-NKAPSGSERVAFAQIIDRVFLLARSFNFRVPPYFISNVRALG 528
DPHGGNLLKTAD +LAYLDFGLVS+IPP VMDALICATV VMNRDYV+LAKGFPALALM ESDL DF PFA ALE ALDPIV DFRRQMG+D G N+APSGSERVAFAQ+IDRVFLLARSFNFRVPPYFISNVRALG
Sbjct: 8 DPHGGNLLKTADKRLAYLDFGLVSVIPPGVMDALICATVYVMNRDYVALAKGFPALALMSESDLLEDFEPFAAALEAALDPIVADFRRQMGLDGGFGSNEAPSGSERVAFAQLIDRVFLLARSFNFRVPPYFISNVRALG 147
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: A0A6H5L3Y4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y4_9PHAE) HSP 1 Score: 234 bits (597), Expect = 7.720e-69 Identity = 120/140 (85.71%), Postives = 125/140 (89.29%), Query Frame = 1
Query: 112 DPHGGNLLKTADNKLAYLDFGLVSIIPPRVMDALICATVQVMNRDYVSLAKGFPALALMDESDLARDFTPFAEALEGALDPIVTDFRRQMGMDEMLG-NKAPSGSERVAFAQIIDRVFLLARSFNFRVPPYFISNVRALG 528
DPHGGNLLKTAD +LAYLDFGLVS+IPP VMDALICATV VMNRDYV+LAKGFPALALM ESDL DF PFA ALE ALDPIV DFRRQMG+D G N APSGSERVAFAQ+IDRVFLLARSFNFRVPPYFISNVRALG
Sbjct: 554 DPHGGNLLKTADKRLAYLDFGLVSVIPPGVMDALICATVYVMNRDYVALAKGFPALALMSESDLLEDFEPFAAALEAALDPIVADFRRQMGLDGGFGSNGAPSGSERVAFAQLIDRVFLLARSFNFRVPPYFISNVRALG 693
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: A0A835YQ71_9STRA (ABC1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ71_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.450e-57 Identity = 104/175 (59.43%), Postives = 124/175 (70.86%), Query Frame = 1
Query: 4 QLVDAQAQVSPADLPILRVGIDCTLTQLLDKGFLHADPHGGNLLKTADNKLAYLDFGLVSIIPPRVMDALICATVQVMNRDYVSLAKGFPALALMDESDLARDFTPFAEALEGALDPIVTDFRRQMGMDEMLGNKAPSGSERVAFAQIIDRVFLLARSFNFRVPPYFISNVRALG 528
++V+ +A+VSP DL +L+VGI CTL QLLDKGFLHADPHGGNLLKT KLAYLDFGLVS IP VMD +ICATV +MNR Y +LA FP LALM D RD FA ALE DPI+ D R ++ + G A + FA I+DR+F LA+ FNF VPPYF+SN+RALG
Sbjct: 293 KVVNERAKVSPNDLALLQVGIQCTLMQLLDKGFLHADPHGGNLLKTPSGKLAYLDFGLVSDIPASVMDTIICATVHLMNRAYPALAGDFPGLALMSADDAQRDLPAFAAALEEVFDPIMLDLRAKLDAAQDGGGGA---FPPIPFASIVDRLFSLAQEFNFVVPPYFLSNLRALG 464
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: A0A6T6CQ29_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CQ29_9RHOD) HSP 1 Score: 135 bits (339), Expect = 1.400e-33 Identity = 75/175 (42.86%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 1 QQLVDAQAQVSPADLPILRVGIDCTLTQLLDKGFLHADPHGGNLLKTADNKLAYLDFGLVSIIPPRVMDALICATVQVMNRDYVSLAKGFPALALMDESDLARDFTPFAEALEGALDPIVTDFRRQMGMDEMLGNKAPSGSERVAFAQIIDRVFLLARSFNFRVPPYFISNVRAL 525
++L D A + D+ ++ +GI C+LTQLL+KGFLHADPH GNLL+T D +LAY+DFG VS++P VM ++ A + ++NR+Y LA+ F LALM DL F F AL+ LDP E+L K S E +A + + LA F +PPYF++N+RAL
Sbjct: 263 EKLFDENAGIRKDDIELVELGIACSLTQLLEKGFLHADPHAGNLLRTNDGRLAYIDFGAVSVVPESVMQCILRAILHLVNREYQLLAEDFTGLALMRTDDLEVVFPDFVVALQETLDP------------EVLKKKYNSSFEGIA-----ETLVSLASRFPLVLPPYFLNNIRAL 420
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: A9BL31_HEMAN (Kin(ABC1) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BL31_HEMAN) HSP 1 Score: 131 bits (330), Expect = 2.930e-32 Identity = 68/174 (39.08%), Postives = 104/174 (59.77%), Query Frame = 1
Query: 4 QLVDAQAQVSPADLPILRVGIDCTLTQLLDKGFLHADPHGGNLLKTADNKLAYLDFGLVSIIPPRVMDALICATVQVMNRDYVSLAKGFPALALMDESDLARDFTPFAEALEGALDPIVTDFRRQMGMDEMLGNKAPSGSERVAFAQIIDRVFLLARSFNFRVPPYFISNVRAL 525
+LV A+ D+ ++ +G+ C+L QLL+ GFLH DPHGGNL+KT D KLAYLDFGLVS IP + +LI A + ++NR+Y SLAK F +AL+ DL ++ + + A D +++F ++ F I +++F L +F F +PPYF++N+RA+
Sbjct: 496 RLVKNSAKAMQEDVSLIEIGVRCSLVQLLETGFLHCDPHGGNLIKTKDGKLAYLDFGLVSEIPETIRYSLISAILNLINREYESLAKDFNGMALIRSDDLDKEISKISYAFFETFDKSLSNF------------------DKFTFQDISEKIFRLTVNFPFILPPYFLNNLRAI 651
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: A0A7S2ZE39_9RHOD (Hypothetical protein n=8 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZE39_9RHOD) HSP 1 Score: 129 bits (324), Expect = 1.910e-31 Identity = 65/175 (37.14%), Postives = 103/175 (58.86%), Query Frame = 1
Query: 1 QQLVDAQAQVSPADLPILRVGIDCTLTQLLDKGFLHADPHGGNLLKTADNKLAYLDFGLVSIIPPRVMDALICATVQVMNRDYVSLAKGFPALALMDESDLARDFTPFAEALEGALDPIVTDFRRQMGMDEMLGNKAPSGSERVAFAQIIDRVFLLARSFNFRVPPYFISNVRAL 525
Q+L+ A V D+P++ GI C LTQ+LD GFLHADPH GNL++T D +LAYLDFGL+S IP V D+ + + ++NR+Y LA+ F +++++ ++ + F++AL +P+V+ G++ F I +++ LA F +P YF+SN+RAL
Sbjct: 428 QRLITDSASVKLQDVPLVEAGIRCCLTQMLDVGFLHADPHAGNLIRTRDGQLAYLDFGLMSTIPDNVRDSFLITILHLINREYELLAEDFASMSIIQAYEMDLELAEFSKALMDEFEPLVS-----------------GGTQNFTFIGITEKLLSLANQFPLVLPSYFVSNMRAL 585
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: A0A7S0QVV8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QVV8_9CHLO) HSP 1 Score: 123 bits (309), Expect = 1.780e-29 Identity = 73/173 (42.20%), Postives = 107/173 (61.85%), Query Frame = 1
Query: 22 AQVSPADLPILRVGIDCTLTQLLDKGFLHADPHGGNLLKTADNKLAYLDFGLVSIIPPRVMDALICAT-VQVMNRDYVSLAKGFPALALMDESDLARD---FTPFAEALEGALDPIVTDFRRQMGMDEMLGNKAPSGSERVAFAQIIDRVFLLARSFNFRVPPYFISNVRALG 528
+QV P D P++ +GI CTL+QLL+ G +HADPHGGNLLK D +L Y+DFGLVSI+P +V D L+CA + V+ RDY ++A F L LM +++ D FA ALE A ++ DF + S ++ F ++I+ + +A F F++PPYF++N RA+G
Sbjct: 445 SQVKPEDFPLVELGIRCTLSQLLETGVMHADPHGGNLLKV-DGQLGYIDFGLVSIVPQQVRDGLVCAVALLVVERDYQAVANLFGELMLMP-AEVVEDPVVMADFANALERAGGELL-DFSQ-------------SEVPQLRFDRLIEALVSIAPRFRFQLPPYFLNNARAIG 601
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: J7G6I5_9CRYP (ABC1 family protein n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G6I5_9CRYP) HSP 1 Score: 122 bits (305), Expect = 6.730e-29 Identity = 63/175 (36.00%), Postives = 101/175 (57.71%), Query Frame = 1
Query: 1 QQLVDAQAQVSPADLPILRVGIDCTLTQLLDKGFLHADPHGGNLLKTADNKLAYLDFGLVSIIPPRVMDALICATVQVMNRDYVSLAKGFPALALMDESDLARDFTPFAEALEGALDPIVTDFRRQMGMDEMLGNKAPSGSERVAFAQIIDRVFLLARSFNFRVPPYFISNVRAL 525
++LV + D+ ++ +G+ C+L QLL+ GFLH DPHGGNL+KT + +LAYLDFGLVS IP V + I A + ++NR+Y SLA+ F +AL+ DL ++ + + A D +++F ++ F I +++ L F F +PPYF++N+RA+
Sbjct: 501 ERLVKHSVKSMQEDVSLIEIGVRCSLVQLLETGFLHCDPHGGNLVKTKNGRLAYLDFGLVSEIPETVRFSFISAILNLINREYESLARDFNGMALIRNDDLDKEISKISFAFFEIFDKSLSNF------------------DKFTFQDITEKILRLTAKFPFILPPYFLNNLRAI 657
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: K8EPY6_9CHLO (ABC1 domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EPY6_9CHLO) HSP 1 Score: 117 bits (294), Expect = 1.820e-27 Identity = 73/177 (41.24%), Postives = 104/177 (58.76%), Query Frame = 1
Query: 25 QVSPADLPILRVGIDCTLTQLLDKGFLHADPHGGNLLKTADNK-LAYLDFGLVSIIPPRVMDALICA-TVQVMNRDYVSLAKGFPALALMDESDL--ARDFTPFAEALEGALDPIVTDFRRQMGMDEMLGNKAP-SGSERVA----FAQIIDRVFLLARSFNFRVPPYFISNVRALG 528
+V P DLP++R+GI CTL+QL++ G +HADPHGGNL+K DN+ LAYLDFGLVS +P +V D L+ A ++ V +DY +A F L L+ S + A +ALE A + + K P SGS ++ F +++ + L F F++PPYFI+N RALG
Sbjct: 372 EVDPKDLPLVRLGIACTLSQLIETGVMHADPHGGNLIKLPDNRGLAYLDFGLVSTVPEQVRDGLVAAVSLMVFKKDYRKVANLFGELMLVPPSVMNDAVKMKDLEDALEDAANKTL---------------KFPESGSGKIVPEIRFDELLFALLALVPRFEFQLPPYFINNARALG 533
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Match: A0A2V3IYP6_9FLOR (Protein kinase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYP6_9FLOR) HSP 1 Score: 117 bits (294), Expect = 2.050e-27 Identity = 68/176 (38.64%), Postives = 100/176 (56.82%), Query Frame = 1
Query: 4 QLVDAQAQVSPADLPILRVGIDCTLTQLLDKGFLHADPHGGNLLKTADNKLAYLDFGLVSIIPPRVMDALICATVQVMNRDYVSLAKGFPALALMDESDLARDFTPFAEALEGALDPIVTDFRR-QMGMDEMLGNKAPSGSERVAFAQIIDRVFLLARSFNFRVPPYFISNVRALG 528
+L+D +A+V D+ ++ GI L QLLDKG+LHAD H GN+LKT LAY+DFGLVS +P V ++L+CA + +++ +Y LA+ F LA+M D+ + +EAL AL+P DF + G E L R I+ ++ L F F YF++N+R LG
Sbjct: 456 KLIDDEAKVKAEDIGLVETGIRFALMQLLDKGYLHADMHNGNMLKTKSGYLAYIDFGLVSEVPLSVRESLVCALMHLIHGEYEYLAETFVGLAVMRSDDVEIELPLLSEALRDALEPENIDFSNDEDGEMERL--------RRFTLVGIVGKLLTLGNRFPFVFNDYFLNNLRCLG 623 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71513.14814.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71513.14814.1 >prot_H-elongata_contig71513.14814.1 ID=prot_H-elongata_contig71513.14814.1|Name=mRNA_H-elongata_contig71513.14814.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp QQLVDAQAQVSPADLPILRVGIDCTLTQLLDKGFLHADPHGGNLLKTADNback to top mRNA from alignment at H-elongata_contig71513:599..2914- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71513.14814.1 ID=mRNA_H-elongata_contig71513.14814.1|Name=mRNA_H-elongata_contig71513.14814.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2316bp|location=Sequence derived from alignment at H-elongata_contig71513:599..2914- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71513:599..2914- >mRNA_H-elongata_contig71513.14814.1 ID=mRNA_H-elongata_contig71513.14814.1|Name=mRNA_H-elongata_contig71513.14814.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1056bp|location=Sequence derived from alignment at H-elongata_contig71513:599..2914- (Himanthalia elongata Himel1 dioecious)back to top |