prot_H-elongata_contig71416.14801.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71416.14801.1
Unique Nameprot_H-elongata_contig71416.14801.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length159
Homology
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BLAST of mRNA_H-elongata_contig71416.14801.1 vs. uniprot
Match: D8LGS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGS7_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 1.080e-54
Identity = 98/159 (61.64%), Postives = 123/159 (77.36%), Query Frame = 0 
Query:    1 QVVQKWKQLGRTLCRLLRMSDYWYFFANDHTLSNKERAERRLSVLREQILHMRTGGGGGFARMRSLVRAFTERYPRSIWLNFQQLMRQPKSQRCRRDMSVCAILLSDIDNPFFRHTTADWPFPRLVDLVTDAYLMERPPLSVLYKEGDIAPRLIGRPTS 159
            Q V+KWK LG+ LCRLLRMSDYWY FA D  LS +ERA RR+SVL +QIL MR   G G   M++LV A  ERYPRS+W  F+QLMRQP+++R RRDM+VCA+LL +IDN FF++TTA WPF RLVDL +D+ L+++P LSVLY+EG+ APR I   T+
Sbjct:  482 QAVRKWKNLGKALCRLLRMSDYWYGFAFDGALSGEERAARRISVL-QQILEMR---GVGRTAMKTLVLAIAERYPRSVWSRFRQLMRQPRAERKRRDMAVCAVLLGEIDNQFFKYTTAGWPFSRLVDLASDSRLVQKPALSVLYEEGETAPRTIDSETT 636
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BLAST of mRNA_H-elongata_contig71416.14801.1 vs. uniprot
Match: A0A6H5KB88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB88_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.950e-27
Identity = 59/118 (50.00%), Postives = 79/118 (66.95%), Query Frame = 0 
Query:   63 MRSLVRAFTERYPRSIWLNFQQLMRQPKSQRCRRDMSVCAILLS---------------------DIDNPFFRHTTADWPFPRLVDLVTDAYLMERPPLSVLYKEGDIAPRLIGRPTS 159
            M++LV A  ERYPRS+W  F+QLMRQP+ +R RRDM+VCA+LL+                     +IDN FF++TTA WPF RLVDL +D+ L+++P LSVLY+EG+ APR I   T+
Sbjct:    1 MKTLVLAIAERYPRSVWSRFRQLMRQPRDERKRRDMAVCAVLLAVRFLTRNTMITRGSYRLCTEEEIDNQFFKYTTAGWPFSRLVDLASDSRLVQKPALSVLYEEGETAPRTIDSETT 118
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71416.14801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGS7_ECTSI1.080e-5461.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB88_9PHAE2.950e-2750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71416contigH-elongata_contig71416:1108..2444 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71416.14801.1mRNA_H-elongata_contig71416.14801.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71416 1108..2444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71416.14801.1 ID=prot_H-elongata_contig71416.14801.1|Name=mRNA_H-elongata_contig71416.14801.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp
QVVQKWKQLGRTLCRLLRMSDYWYFFANDHTLSNKERAERRLSVLREQIL
HMRTGGGGGFARMRSLVRAFTERYPRSIWLNFQQLMRQPKSQRCRRDMSV
CAILLSDIDNPFFRHTTADWPFPRLVDLVTDAYLMERPPLSVLYKEGDIA
PRLIGRPTS
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