mRNA_H-elongata_contig71032.14766.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: D7FJB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJB4_ECTSI) HSP 1 Score: 302 bits (773), Expect = 2.830e-94 Identity = 162/329 (49.24%), Postives = 205/329 (62.31%), Query Frame = 2
Query: 11 ADKGYITSLETRRVETRVDEETCTFVELAAEGL---LDNSPTLHAYHPTM-----LYGACKFC-SDALPCYRFSTTTCRPELCVCNHGAVHHTALDLKSV------MEEANGEERFD-RSSHPRSVHLRATTQHGPPLAKLLRRCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
ADKG I SLET V ++ E +FVELAAE L + T + + L+GAC+ C + + C+RFS+T CRPELCVC HG+ HH +D ++ + E GE R++ A+ + LLRR F+ SIG AG+RD+LGLKRT GS+DG LPPSRR LL A+N+PHL AA+ ++RS R T +C L+VGGRALCKHA+R REGWWG CGGTE EKN+ AE + L +LA ATW+N+H FGGGG+DGVLE+R+ GYGARWS DG VFRGFLEPH +DGH +GWRH
Sbjct: 92 ADKGSIASLETGHVAEAIEHEAYSFVELAAELFAAGLTGAGTRTGFGCSAAPLAPLFGACEMCETTVVKCHRFSSTPCRPELCVCTHGSSHHACIDPRATPISLPALTERPGENVVGARATCDSRTTQSASARWNLAAVDLLRRGEKFISSIGQAGIRDLLGLKRTVGSIDGCLPPSRRVLLKAINKPHLLVVSEGCAGTRSSGSCLAADGSQKRSEGRAILPRATTVCILTVGGRALCKHAVRAREGWWGECGGTEAEKNDHAEEVTLRLLAGATWVNLHVFGGGGKDGVLEIREESGYGARWSADGAVFRGFLEPHMKDGHEKGWRH 420
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A3M6V321_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6V321_POCDA) HSP 1 Score: 126 bits (316), Expect = 2.690e-29 Identity = 73/178 (41.01%), Postives = 92/178 (51.69%), Query Frame = 2
Query: 416 IGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
+G G+ D+L ++ T GS+D PP + L+ + NE H KP L+VG RAL KH R WWGAC G+E KNE A +V+ IL A+WINIH + V+EVR +GYGARWS DG VFRGFLEP EDGH+ GW+H
Sbjct: 129 LGVRGLLDLLNIRHTQGSVD-IFPPPVKVLIESFNEKH--KPNAN----------------------------------LTVGARALSKHCHRDSSEWWGACAGSEQVKNEHAITVVMRILEDASWINIHLLPH--ELKVIEVRCTEGYGARWSHDGKVFRGFLEPQMEDGHAAGWKH 267
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: UPI000C04626F (uncharacterized protein LOC111339424 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04626F) HSP 1 Score: 124 bits (311), Expect = 1.330e-28 Identity = 70/178 (39.33%), Postives = 89/178 (50.00%), Query Frame = 2
Query: 416 IGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
+G G+ D+L ++RT GS+D P L+ + N+ H L+VG RAL KH R WWG C G+E KNE A +V+ IL A+WINIH G + V+EVR +GYGARWS DG VFRGFLEP EDGH+ GW+H
Sbjct: 129 LGVRGLLDLLNIRRTQGSVD-IFPSPVEVLIESFNKKHRPN------------------------------------ANLTVGARALSKHCHRDSSEWWGVCAGSEQVKNEHANTVVMRILEDASWINIHCLPHGLK--VIEVRCIEGYGARWSYDGKVFRGFLEPQMEDGHAVGWKH 267
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A7S1C8E3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8E3_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.420e-28 Identity = 68/177 (38.42%), Postives = 88/177 (49.72%), Query Frame = 2
Query: 419 GPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
G V +LG++RT S+ LPPSR L + H + T R+ PS+ L+VG RAL KH R GWWGA G+E KN ++ +L ATW+N+H ++EVR A GYGARW+ DG FRGFLEPH DGH+ GW+H
Sbjct: 9 GVRAVMHLLGMRRTFKSVT-LLPPSRAVLCASFEALHSQHAVPATS----------------RAKPSQ----------LTVGARALAKHCHRASSGWWGAAAGSEAAKNAWGREVLARVLDGATWLNVHLLPHAAA--IVEVRTADGYGARWTADGAAFRGFLEPHAADGHATGWKH 156
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A3S4PZE1_9MAGN (ASCH domain-containing protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4PZE1_9MAGN) HSP 1 Score: 125 bits (314), Expect = 6.060e-28 Identity = 71/174 (40.80%), Postives = 91/174 (52.30%), Query Frame = 2
Query: 428 GVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
GV +LGL TAG++ LPP R LL++ PH KP V+ + L+ G RAL KH R GWWG+ GG++ KN A ++ HI+ W+NIH D VLE+R A+GYGARWS DG F GFLEP+ EDGHS+GW+H
Sbjct: 253 GVGSLLGLMHTAGTVPDALPPPRSALLSSFIVPH--KPNVKGST-------------------------------LTSGARALSKHVSRTSNGWWGSFGGSDSNKNVLALKVISHIITHCCWMNIHIVQP--HDCVLEIRVAEGYGARWSGDGSKFIGFLEPYMEDGHSKGWKH 391
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A2K1ZTS9_POPTR (ASCH domain-containing protein n=8 Tax=Populus TaxID=3689 RepID=A0A2K1ZTS9_POPTR) HSP 1 Score: 124 bits (310), Expect = 2.050e-27 Identity = 72/181 (39.78%), Postives = 92/181 (50.83%), Query Frame = 2
Query: 407 LISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
L + GVR +LGL T G++ LPP R TLL++ P NI+ + L+ G RAL KHA R R+ +WG GG++ KN A N++ I+A+ W NIH G V E+R A GYGARWS DG F GFLEP+ EDGHSRGW+H
Sbjct: 244 LFGLSYGGVRSLLGLADTGGTVSNALPPPRSTLLSSF------------------------------IFPYNPNIKGSA---LTHGARALAKHAERSRDRYWGILGGSDSTKNRLAMNVISRIIASCCWSNIHVVPQHGA--VFEIRVADGYGARWSKDGTKFIGFLEPYIEDGHSRGWKH 389
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A1Y1HVJ8_KLENI (RNA-binding ASCH domain protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HVJ8_KLENI) HSP 1 Score: 123 bits (308), Expect = 5.190e-27 Identity = 80/218 (36.70%), Postives = 105/218 (48.17%), Query Frame = 2
Query: 305 ERFDRSSHPRSVHLRATTQHGPPLAKLLRRCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTA---LNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
E +R++ ++H+ + P+ +++ L +GP + +L ++RTAGS+D L PSR T+L A LN+P +N +L+VG RAL KHA R WWG G+E KNE A +VL IL A W N H V E R A+GYGARWS DG FRGFLEP E GH RGWRH
Sbjct: 237 EEQERAAGVVAIHVEPCPEDTQPVHRIMT----LLQELGPRPLFLLLRMRRTAGSIDDLLAPSRATMLAAFDALNDP--------------------------------KN-------RLTVGARALTKHAHRCSHNWWGVPTGSEQAKNEHARAVVLRILDGAVWQNAHLLPH--DVAVFEARVAEGYGARWSADGTQFRGFLEPQMEGGHQRGWRH 409
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: V3Z9A2_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3Z9A2_LOTGI) HSP 1 Score: 121 bits (304), Expect = 5.220e-27 Identity = 78/189 (41.27%), Postives = 94/189 (49.74%), Query Frame = 2
Query: 392 RCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREG--WWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDG-VLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
R L+ +G G+ D+LG+++T G+ + PPSR+ LL + E H K +L VG RAL KH R EG WWG C GTE KN A +V IL ATWINIH QD V+EVRQ +GYGARW+ DG FRGFLEP DGH GWRH
Sbjct: 188 RIREILMLLGKRGIMDLLGIRKTVGTKE-MFPPSRQALLESFQEKHSAK------------------------------------SQLGVGARALAKHYHRD-EGMSWWGQCTGTEAAKNADALRIVNKILDGATWINIHWLP---QDVFVIEVRQEEGYGARWNADGSGFRGFLEPQMVDGHEIGWRH 335
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A9T753_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T753_PHYPA) HSP 1 Score: 119 bits (299), Expect = 6.870e-27 Identity = 75/207 (36.23%), Postives = 99/207 (47.83%), Query Frame = 2
Query: 338 VHLRATTQHGPPLAKLLRRCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTL---LTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
+H+ Q P A LL ++ ++G GVR +LG++ T G++ LPP + L +AL P + C++SVG RAL KHA R +GWWG+ GTE KN+ AE + ++ A WINIH VLE+R A GYGARW DG FRGFLEP E+GH WRH
Sbjct: 111 IHVVRPAQRDP--ADLLSDILN---TLGIDGVRVLLGMRTTNGTLKEALPPPKSLLADSFSALQNPDIAG------------------------------------CRISVGARALAKHAPRSLDGWWGSISGTEAAKNKLAETTMHRLMKHAVWINIHL----APIPVLEIRVADGYGARWLADGSKFRGFLEPPMEEGHMVNWRH 272
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A2T7PZ21_POMCA (Uncharacterized protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PZ21_POMCA) HSP 1 Score: 117 bits (292), Expect = 5.540e-26 Identity = 75/187 (40.11%), Postives = 89/187 (47.59%), Query Frame = 2
Query: 392 RCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGRE-GWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 949
R L+ + G+ D+LGL++T GS + + PPSR L+ + E H K +E W VG RAL KH R WWG C G+E EKN A + V IL ATWINIH +LEVRQ GYGARW DG FRGFLEP E GH GWRH
Sbjct: 119 RVREILMLLCKRGILDLLGLRKTVGSKE-KFPPSRMRLMESFKEKHSVK-----------SELW-------------------------VGARALSKHYHRDHSTSWWGNCTGSEEEKNVYALDKVTKILNNATWINIHWLPHDVY--ILEVRQENGYGARWVADGSSFRGFLEPQMEGGHDVGWRH 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig71032.14766.1 >prot_H-elongata_contig71032.14766.1 ID=prot_H-elongata_contig71032.14766.1|Name=mRNA_H-elongata_contig71032.14766.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=268bp MLYGACKFCSDALPCYRFSTTTCRPELCVCNHGAVHHTALDLKSVMEEANback to top mRNA from alignment at H-elongata_contig71032:528..2090+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig71032.14766.1 ID=mRNA_H-elongata_contig71032.14766.1|Name=mRNA_H-elongata_contig71032.14766.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1563bp|location=Sequence derived from alignment at H-elongata_contig71032:528..2090+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig71032:528..2090+ >mRNA_H-elongata_contig71032.14766.1 ID=mRNA_H-elongata_contig71032.14766.1|Name=mRNA_H-elongata_contig71032.14766.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1608bp|location=Sequence derived from alignment at H-elongata_contig71032:528..2090+ (Himanthalia elongata Himel1 dioecious)back to top |