mRNA_H-elongata_contig70959.14757.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: D7FKK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK5_ECTSI) HSP 1 Score: 107 bits (268), Expect = 1.420e-25 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1
Query: 1 VMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALRQ 159
VMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALRQ
Sbjct: 319 VMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALRQ 371
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: A0A7S1UGU7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGU7_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.440e-18 Identity = 38/51 (74.51%), Postives = 43/51 (84.31%), Query Frame = 1
Query: 1 VMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAAL 153
V+ +VQ +VY YEGSINKFLMDDKGSTL+A +GLPPV H DDP R VLAAL
Sbjct: 75 VLESVQRAVYRYEGSINKFLMDDKGSTLIACFGLPPVSHEDDPLRAVLAAL 125
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: X6MV46_RETFI (Guanylate cyclase domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MV46_RETFI) HSP 1 Score: 79.0 bits (193), Expect = 3.430e-16 Identity = 33/51 (64.71%), Postives = 47/51 (92.16%), Query Frame = 1
Query: 13 VQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALRQEK 165
+Q+ +Y+Y+GS+NKFL+DDKGST++AV+GLPPV H++DP+RGVLAAL +K
Sbjct: 126 LQDVIYKYQGSLNKFLVDDKGSTVMAVFGLPPVAHSNDPSRGVLAALELQK 176
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: A0A5A8CC48_CAFRO (Phosphodiesterase n=7 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CC48_CAFRO) HSP 1 Score: 80.9 bits (198), Expect = 4.220e-16 Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = 1
Query: 1 VMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAAL 153
V+ VQ +VY YEGS+NKFLMDDKGSTL+AV+GLPP+ H DD TR VLAAL
Sbjct: 308 VLRTVQSAVYRYEGSVNKFLMDDKGSTLIAVFGLPPISHHDDSTRAVLAAL 358
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: A0A7S2R6Q5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6Q5_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.730e-16 Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 1
Query: 1 VMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALR 156
V+ VQ++VY+YEGSINKFLMDDKGSTL+A +GL P GH DD RGVLAALR
Sbjct: 254 VLEGVQKAVYQYEGSINKFLMDDKGSTLIACFGLTPNGHEDDAVRGVLAALR 305
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: A0A7S0H2E7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H2E7_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 1.070e-15 Identity = 33/52 (63.46%), Postives = 47/52 (90.38%), Query Frame = 1
Query: 1 VMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALR 156
+M VQ++VY+YEGS+NKFLMDDKGSTL+AV+GLPP+ H +DP RG+L++++
Sbjct: 330 IMQTVQKAVYKYEGSLNKFLMDDKGSTLIAVFGLPPLAHENDPVRGLLSSIQ 381
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: F0XWN7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWN7_AURAN) HSP 1 Score: 79.3 bits (194), Expect = 1.460e-15 Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 10 AVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALR 156
A Q++VYEYEGS+NKFL DDKGSTL+A +GLPP H DDP R VLAALR
Sbjct: 869 AAQKAVYEYEGSVNKFLHDDKGSTLIACWGLPPTTHVDDPVRAVLAALR 917
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: A0A7S2C3L5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3L5_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 5.440e-15 Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 1
Query: 1 VMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAAL 153
V+V VQ++VY+YEGS+NKFLMDDKGSTL+A +GL PV H DD R LA++
Sbjct: 49 VLVGVQKAVYKYEGSVNKFLMDDKGSTLLACFGLSPVSHIDDALRACLASI 99
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: X6NR00_RETFI (Guanylate cyclase domain-containing protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NR00_RETFI) HSP 1 Score: 76.6 bits (187), Expect = 8.300e-15 Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 10 AVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAA--LRQEKVSVFISDYLQLWIRY 210
A+QE VY Y+GS+NKFL+DDKGST++A++GLPPV H +DP R VL A L+ E +F + Y + ++Y
Sbjct: 249 ALQEKVYLYQGSLNKFLVDDKGSTVMAIFGLPPVAHVNDPERAVLTAMELQTELSQLFTAHYKEDMLKY 317
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Match: A0A7R9YAC5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAC5_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 8.820e-15 Identity = 35/51 (68.63%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 1 VMVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAAL 153
V+ + Q +VY YEGSINKFLMDDKGSTL+A +GLPPV H DD R VLAA+
Sbjct: 142 VLTSAQRAVYRYEGSINKFLMDDKGSTLIACFGLPPVSHEDDSLRAVLAAI 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70959.14757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70959.14757.1 >prot_H-elongata_contig70959.14757.1 ID=prot_H-elongata_contig70959.14757.1|Name=mRNA_H-elongata_contig70959.14757.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp MVAVQESVYEYEGSINKFLMDDKGSTLVAVYGLPPVGHADDPTRGVLAALback to top mRNA from alignment at H-elongata_contig70959:2687..2911- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70959.14757.1 ID=mRNA_H-elongata_contig70959.14757.1|Name=mRNA_H-elongata_contig70959.14757.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=225bp|location=Sequence derived from alignment at H-elongata_contig70959:2687..2911- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70959:2687..2911- >mRNA_H-elongata_contig70959.14757.1 ID=mRNA_H-elongata_contig70959.14757.1|Name=mRNA_H-elongata_contig70959.14757.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig70959:2687..2911- (Himanthalia elongata Himel1 dioecious)back to top |