mRNA_H-elongata_contig70320.14690.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A0N9LKY3_SACJA (Phosphomannomutase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A0N9LKY3_SACJA) HSP 1 Score: 306 bits (785), Expect = 2.650e-98 Identity = 150/203 (73.89%), Postives = 178/203 (87.68%), Query Frame = 1
Query: 1 STTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAKQGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKA 609
+T+ +FIEARGGKHLRFKKGYKNVIDKAI+LN+EG+DCQLAIETSGHAAFK+N MLDDGAYLALKVLVE+AK G+GFDLG +IQDLAEP+ESTEFRLRVS++VD ATM+ +TL AT+AAV +S W++E NFEGLRV VDEG+G+AGWL+NRMSLHEPIVIF VESEV+GGVA +A LL HVL P + ELD+S +EK+
Sbjct: 412 TTSNGLARFIEARGGKHLRFKKGYKNVIDKAIELNDEGIDCQLAIETSGHAAFKQNQMLDDGAYLALKVLVEMAKGGQGFDLGETIQDLAEPLESTEFRLRVSNTVDPATMYTKTLEATKAAVAHVSQWKSEDTNFEGLRVAVDEGDGRAGWLMNRMSLHEPIVIFNVESEVEGGVAAIAAGLLKHVLEPLRGELDVSSVEKS 614
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A835Z477_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z477_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.630e-70 Identity = 119/211 (56.40%), Postives = 150/211 (71.09%), Query Frame = 1
Query: 1 STTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALK---------VLVEIAKQGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEK 606
+T+ +FI GG+HLR+KKGYKNVIDKA LN GVDCQLAIETSGH A KEN MLDDGAY+A+K +LVE+A+QG+G +L ++ L EP++ EFRLRV +TAT++++ L A AA ++ WE E NFEGLRV VDEG G+ GW + RMSLH+PIVIF VESEV+ GVA +A+ LL VL F++ LDLSPL K
Sbjct: 238 TTSNGLNRFILQSGGQHLRYKKGYKNVIDKAQDLNAAGVDCQLAIETSGHGALKENHMLDDGAYMAMKARTFTLYVGILVELARQGRGKNLSDLMEGLQEPLDEVEFRLRVPAGFETATVYQQALDAFTAAAAKVPAWEVEVPNFEGLRVNVDEGGGRRGWAMARMSLHDPIVIFNVESEVESGVAAIAKQLLSEVLAGFEDRLDLSPLHK 448
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A7S2Y3H0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3H0_9STRA) HSP 1 Score: 186 bits (473), Expect = 3.170e-56 Identity = 93/174 (53.45%), Postives = 119/174 (68.39%), Query Frame = 1
Query: 1 STTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAKQGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDG 522
+T+ +++IE GGKH R+ +GYKNVIDK I LNE+GVDC +A+ETSGH AF+EN LDDGAYLA+K+LVE+A+ GKG L + + DL EP E++E RL V T + E + +A WE EK N+EG RV VDEG GK GW R SLH+PIVI +ESEV+G
Sbjct: 47 TTSNGLKRYIENLGGKHCRYMRGYKNVIDKGILLNEQGVDCAVAMETSGHCAFRENRFLDDGAYLAVKLLVEMARLGKGTPLTSLLADLEEPAEASELRLEVRPDYATNEVMEEMVDLVKAITKGNDQWEAEKENYEGHRVCVDEGNGKFGWFSVRQSLHDPIVIINIESEVEG 220
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: M1VAC4_CYAM1 (Phosphoglucomutase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VAC4_CYAM1) HSP 1 Score: 188 bits (478), Expect = 5.210e-53 Identity = 99/207 (47.83%), Postives = 127/207 (61.35%), Query Frame = 1
Query: 4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKV---LVEIAKQGKGFDLGASIQDLAEPMESTEFRLRV--SDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKA 609
T+ +FI RGG H R++KGYKN+IDK I+LN+ GVDC LAIETSGH A +EN MLDDGAYLA+K+ L+ + +QG + + + LAEP+E EFRL + + +T M + +W EK N+EG RV VDEG G+AGWLL R SLH+P++ VESE GGV +A L F LDLSPLEK
Sbjct: 404 TSNGLAEFIRKRGGHHFRYRKGYKNIIDKGIELNQSGVDCPLAIETSGHGAMRENYMLDDGAYLAVKIVSELINLQRQGDHRGIDSLLDGLAEPLEEKEFRLNLLTENYKETGKMIVEAFHDFVTSAEAPPNWRLEKENYEGWRVAVDEGNGRAGWLLLRQSLHDPLLPLNVESETQGGVKRIARILYDWAAPRFASVLDLSPLEKV 610
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A2V3IKF4_9FLOR (Phosphomannomutase/phosphoglucomutase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKF4_9FLOR) HSP 1 Score: 186 bits (472), Expect = 2.060e-52 Identity = 96/208 (46.15%), Postives = 132/208 (63.46%), Query Frame = 1
Query: 4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAK---QGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKATNK 618
T+ +FIE GGKH R++KGYKNVIDK I+LN+ G+ +LAIETSGH A +EN MLDDGAYLA+K+L+E+ + G +G + L EP+E EFRL+ D D + + A ++ W+ E+ N+EG RV V+EG+GKAGWLL R SLH+P++ +ESEV GGVA +A L+ L P +D S L++ K
Sbjct: 365 TSNGLARFIEQLGGKHFRYRKGYKNVIDKGIELNQAGIQTELAIETSGHGAMRENYMLDDGAYLAVKILIEMVRLRLDGDSRGIGGLLDGLDEPLEEKEFRLKFLDQADYSNYGANVVEAFAKFASGVTGWKVEETNYEGYRVSVEEGDGKAGWLLLRKSLHDPLLPLNIESEVAGGVAAIARVLVDDFL-PNHSNVDPSTLQQYIQK 571
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A7J7IGN4_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGN4_9RHOD) HSP 1 Score: 181 bits (459), Expect = 2.870e-50 Identity = 96/207 (46.38%), Postives = 128/207 (61.84%), Query Frame = 1
Query: 4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKV---LVEIAKQGKGFDLGASIQDLAEPMESTEFRLRV--SDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKA 609
T+ +FI + GG+H R++KGYKN+IDKA +LNE G+DC LAIETSGH A +EN MLDDGAYLA+K+ L+ + QG + + I+ L+EP+E EFRL + + +T M G W E+ N+EG RV V+E +G+AGWLL R SLH+P++ VESE GGVA + L F + LDLSPLEK
Sbjct: 403 TSNGLAEFIRSHGGRHFRYRKGYKNIIDKACELNESGIDCPLAIETSGHGAMRENYMLDDGAYLAVKIVSELINLRSQGDNNGIVSLIEGLSEPLEEREFRLNLLTENYKETGKMIVDAFHDFVVGSGAPKGWTLERENYEGWRVAVEELDGRAGWLLLRQSLHDPLLPLNVESETLGGVAHICRILYGWAKPRFADVLDLSPLEKV 609
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: R7QAC4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAC4_CHOCR) HSP 1 Score: 179 bits (455), Expect = 3.080e-49 Identity = 94/210 (44.76%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAKQGKGFDL---GASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKATNKRQ 624
T+ ++FIE GG H R+KKGYKNVIDK I+LN++GV +LAIETSGH A KEN MLDDGAYLA+K+++E+ + D+ G + L P+E EFRL+ D + R + A + W E+ N+EG RV VDEG+ KAGWLL R SLH+P++ +ESE +GGVA +A L++ F +D S L ++ +K +
Sbjct: 489 TSNGLKRFIENEGGVHFRYKKGYKNVIDKGIELNDQGVQTELAIETSGHGAMKENYMLDDGAYLAVKIIIEMVRLRLAGDMRGIGGLLDGLDAPLEEHEFRLKFIDQENFGEYGGRVVEAFSEFASSVDGWTVEETNYEGFRVSVDEGDDKAGWLLLRQSLHDPLLPLNIESEREGGVAAIARVLVNDFFPSFPN-VDASILAQSASKAE 697
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A2V0PQF0_9CHLO (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PQF0_9CHLO) HSP 1 Score: 176 bits (445), Expect = 2.110e-48 Identity = 95/210 (45.24%), Postives = 128/210 (60.95%), Query Frame = 1
Query: 4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAK--------QGKGFDLGASIQDLAEPMESTEFRLRVSDSVDT---ATMFERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPL 600
T+ FIE GG+H RFK+GY+NVI+K I+LNE GVDC+L +ETSGH A +EN LDDGAY+A+K ++E+ + G DL A +++L EP E+ E+R+++ D+ A + E A G S W + VN EG RV VDEG G GW L R SLH+P+++ VES+V GGVA + LL L K+ LDLS L
Sbjct: 377 TSNGLTSFIEGLGGQHCRFKRGYRNVINKGIELNEAGVDCELMMETSGHGALRENRYLDDGAYMAVKAVIELVRLRMSGCDITNGGCDLTALLRELREPAEAGEYRIKIKDADFKPVGAAVLEGFKAWLDKGAGGESAWSLDPVNHEGWRVSVDEGAGARGWALLRASLHDPLLVLNVESDVPGGVAKIRGHLLESFLSRHKDALDLSAL 586
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A1H9T801_BUTFI (Phosphomannomutase n=6 Tax=Butyrivibrio TaxID=830 RepID=A0A1H9T801_BUTFI) HSP 1 Score: 173 bits (439), Expect = 5.020e-48 Identity = 99/202 (49.01%), Postives = 129/202 (63.86%), Query Frame = 1
Query: 25 FIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVEIAKQGKGFDLGASIQDLAEPMESTEFRLRV-SDSVDTATMF---ERTLAATQAAVGRLSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKEELDLSPLEKATNK 618
FIEA GGKH RFK+GY+NVID++I+LN EG+D QLAIETSGH AFKEN LDDGAYL +K+L+E+ GKG L I+DL+EP ES E R V +D ++ + +R L + A G++ W + N+EG+RV D+ G GWLL R SLHEPI+ +ES GG MA L + G ++ LD SPL+ K
Sbjct: 319 FIEAHGGKHKRFKRGYRNVIDESIRLNNEGIDSQLAIETSGHGAFKENYFLDDGAYLMVKLLIEM---GKGKKLEEMIKDLSEPCESDEIRFPVYADKIEGGDLQLNGDRILKMLEEAAGKVEGWSLPESNYEGVRVNTDKDHGD-GWLLLRKSLHEPIMPLNIESNTKGGNLIMATKLKEILAG--EDTLDQSPLDAFIGK 514
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Match: A0A7S2ZXM3_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZXM3_9RHOD) HSP 1 Score: 174 bits (442), Expect = 6.770e-48 Identity = 100/209 (47.85%), Postives = 130/209 (62.20%), Query Frame = 1
Query: 4 TTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHAAFKENMMLDDGAYLALKVLVE---IAKQGKGFDLGASIQDLAEPMESTEFRLRVSDSVDTATMFERTLAATQAAVGR-LSHWETEKVNFEGLRVVVDEGEGKAGWLLNRMSLHEPIVIFTVESEVDGGVATMAETLLHHVLGPFKE---ELDLSPLEKA 609
T+ FIE++GG H RFK+GYKNVID+ I+LN +G D QL+IETSGH A KEN MLDDGAYLA+K+++E I ++ K + + L EP E+ E+R++ + + L A A G+ +S WE EKVN+EG R V E GKAGW L R SLH+P++ VESEV+GGV + TL PF E ELDLS L A
Sbjct: 395 TSNGLSAFIESKGGVHFRFKRGYKNVIDQGIELNIKGQDSQLSIETSGHGAMKENYMLDDGAYLAVKIIIELVRIKRRNKEQGVEVLYEGLGEPKEAVEYRIKFKSADFDFKSYGSKLLADLAEFGKGVSEWELEKVNYEGFRFSVAEEGGKAGWFLLRQSLHDPLLPLNVESEVEGGVQAIVSTLK-----PFLERYSELDLSVLPDA 598 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70320.14690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70320.14690.1 >prot_H-elongata_contig70320.14690.1 ID=prot_H-elongata_contig70320.14690.1|Name=mRNA_H-elongata_contig70320.14690.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=209bp STTRARQQFIEARGGKHLRFKKGYKNVIDKAIQLNEEGVDCQLAIETSGHback to top mRNA from alignment at H-elongata_contig70320:882..3166- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70320.14690.1 ID=mRNA_H-elongata_contig70320.14690.1|Name=mRNA_H-elongata_contig70320.14690.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2285bp|location=Sequence derived from alignment at H-elongata_contig70320:882..3166- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70320:882..3166- >mRNA_H-elongata_contig70320.14690.1 ID=mRNA_H-elongata_contig70320.14690.1|Name=mRNA_H-elongata_contig70320.14690.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1254bp|location=Sequence derived from alignment at H-elongata_contig70320:882..3166- (Himanthalia elongata Himel1 dioecious)back to top |