mRNA_H-elongata_contig70319.14689.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: D8LMN1_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN1_ECTSI) HSP 1 Score: 159 bits (401), Expect = 2.280e-43 Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 1
Query: 1 KVMHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
+VMHKLVHPHIVGYLGAELQDS+RKLCIFQEWVPAGSLHSLL QFG+LSDAMTRKYT QV+ GL YLHANRVIHRDVKSKNILV
Sbjct: 352 QVMHKLVHPHIVGYLGAELQDSKRKLCIFQEWVPAGSLHSLLGQFGALSDAMTRKYTRQVLEGLVYLHANRVIHRDVKSKNILV 435
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA) HSP 1 Score: 109 bits (272), Expect = 8.020e-27 Identity = 48/83 (57.83%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 4 VMHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
+M + HP+IV YLGAE+++ +LCIFQEWVP GS+ SLL +FG S+ MTR+YT Q + GLTYLH ++V+HRD+K NILV
Sbjct: 140 LMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILV 222
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.600e-25 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 4 VMHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
+M HP+IV YLGAE+++ +LCIFQEWVP GS+ SLL +FG S+ MTR YT Q + GL YLH++ V+HRD+ NILV
Sbjct: 56 LMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILV 138
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: A0A7S1XYM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYM9_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.520e-23 Identity = 48/84 (57.14%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 KVMHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
++M L HP+IV YLG + K+ IFQEWVP GS+ SLL +FG S+ M + YT QV+NGLTYLHAN +IHRD+K NILV
Sbjct: 234 ELMKMLDHPNIVAYLGTAVDAMAGKVYIFQEWVPGGSISSLLKRFGPFSERMCQSYTRQVLNGLTYLHANSIIHRDIKGANILV 317
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: A0A7S3UV54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV54_HETAK) HSP 1 Score: 102 bits (253), Expect = 1.590e-23 Identity = 45/83 (54.22%), Postives = 60/83 (72.29%), Query Frame = 1
Query: 4 VMHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
+M L HP+IV Y GAE+ + + LCIFQ+WVP GS+ SLL +FG + + RKYT Q++ GL YLH N++IHRD+K NILV
Sbjct: 141 LMRSLRHPNIVSYFGAEVSEEECSLCIFQQWVPGGSVASLLKKFGPFREHVVRKYTKQLLKGLRYLHNNKIIHRDIKGANILV 223
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: F0YDL8_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDL8_AURAN) HSP 1 Score: 93.6 bits (231), Expect = 6.820e-22 Identity = 44/85 (51.76%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 1 KVMHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGS-LSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
+VM L H +IV YLGAE++++ RKL IFQEWVP GSL +++ FG L D + R+Y + GL YLH +RV+HRDVK +N+L+
Sbjct: 56 EVMSSLRHENIVEYLGAEIEEADRKLHIFQEWVPGGSLSAVVRTFGGRLDDDVNRRYLEHCLRGLVYLHEHRVVHRDVKGENVLI 140
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: A0A7S1FWX6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FWX6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.690e-21 Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 4 VMHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
+M + HP+IV YLGAE+ D + L IFQEWVP GS+ LL +FG + R Y QV+ GL YLHAN +IHRD+K NILV
Sbjct: 193 LMREFDHPNIVRYLGAEVDDEEGTLYIFQEWVPGGSVADLLKKFGGFGYGVVRNYLEQVLKGLAYLHANNIIHRDIKGGNILV 275
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: D7G097_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G097_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 2.680e-21 Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 KVMHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
++M +L HP+IV YLGAE+ D ++ + IFQEWVP GS+ +LL FG SD YT Q++ GL YLH+ RVIHRD+K NIL+
Sbjct: 106 ELMRQLTHPNIVCYLGAEVNDKEKTISIFQEWVP-GSVTTLLVNFGPFSDRRIADYTKQILQGLVYLHSERVIHRDIKGGNILI 188
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: A0A250WQ98_9CHLO (Protein kinase domain-containing protein (Fragment) n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WQ98_9CHLO) HSP 1 Score: 90.1 bits (222), Expect = 3.690e-21 Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 13 KLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGSLSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
KL H H+VGY+ ++L + L IF E+VP GS+ S+L++FG S+ + R YT Q++ GL YLH R++HRDVK N+LV
Sbjct: 48 KLSHKHVVGYIDSQLDEKTSTLYIFLEYVPGGSICSMLERFGKFSEELVRNYTRQLLLGLEYLHGKRIVHRDVKGGNVLV 127
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Match: F0XVW6_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVW6_AURAN) HSP 1 Score: 92.4 bits (228), Expect = 4.200e-21 Identity = 42/85 (49.41%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 1 KVMHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFG-SLSDAMTRKYTGQVVNGLTYLHANRVIHRDVKSKNILV 252
++M KL H +IV YLGAEL + L I+QEWVP GS+ SLL +FG + +D++T++Y + + GL YLH +R++HRD+K N+LV
Sbjct: 95 QLMAKLSHANIVEYLGAELDEGAGLLSIYQEWVPGGSIDSLLAKFGGTFADSITKRYAEETLKGLAYLHEHRIVHRDIKGGNVLV 179 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70319.14689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70319.14689.1 >prot_H-elongata_contig70319.14689.1 ID=prot_H-elongata_contig70319.14689.1|Name=mRNA_H-elongata_contig70319.14689.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=82bp MHKLVHPHIVGYLGAELQDSQRKLCIFQEWVPAGSLHSLLDQFGSLSDAMback to top mRNA from alignment at H-elongata_contig70319:793..1044- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70319.14689.1 ID=mRNA_H-elongata_contig70319.14689.1|Name=mRNA_H-elongata_contig70319.14689.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=252bp|location=Sequence derived from alignment at H-elongata_contig70319:793..1044- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70319:793..1044- >mRNA_H-elongata_contig70319.14689.1 ID=mRNA_H-elongata_contig70319.14689.1|Name=mRNA_H-elongata_contig70319.14689.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=492bp|location=Sequence derived from alignment at H-elongata_contig70319:793..1044- (Himanthalia elongata Himel1 dioecious)back to top |