mRNA_H-elongata_contig70285.14686.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: A0A6H5KX57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX57_9PHAE) HSP 1 Score: 486 bits (1250), Expect = 2.730e-160 Identity = 308/627 (49.12%), Postives = 383/627 (61.08%), Query Frame = 1
Query: 22 KVHHVLKDHPYRKLALSLRRSSISARQ-SSVSLPTTALLRVVGLTASYTYAVGEAKVKASLRSMCSELLVTNLSTASPEELTGSGYHAMGASAEVKLVP---SDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPS------------FASPLRQNGKIAARGWGAYAHRLAVGS----------------NICGKNNGKIVSITGQDHKRRALSQCG--------KYASGKQVGHVTPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVPDTFPRYEHLKKVLKEKYASH---EGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKPLEDRTISPGEDALLVAQRSRERSARKVLLPAAGKVNAKVTPTLALSAINLFAKKTKVVLEENWEEVAGGFWACTLTYESPLRKLIGVGKAPGKKAAKVEAADALVGKLLNVL 1773
+VHHVLKDHPYRKLALSLRRSS++ +S + +++ RVVGLTASY+YAVG+AK++ASL +C EL +T TA+ +EL GY AMGA+AEV L P S + + P GVVP ++KPH + TFFRRE G TAF++ MACVR ME+A + F+SP+ +GK+A R WGAYAH+LA+ + G+ G TG +R ++CG + +S + H+ LLAELEHWYEAVKT+VVSWEE ED+A IL+M GC A+S P+D + +++FW VP TF RY+ LK VL +KY H + FRGIVFV QRVTTHVLAHVIA DP +A F ACLYASS+PATASLSV++AQ+QASIE+FR GS+NLL+AT VAEEG+DIP ANCV+R+DAM H VS+VQGRGRAR+E SSFVVLS+R DRTTADLEAVE +Q RLV F+P ALSA+N FA+KTK LE+ W + AGG W CTL+YESPLR+L G APGKKAAK AA KLL VL
Sbjct: 137 EVHHVLKDHPYRKLALSLRRSSLTPPPPASPATGSSSHPRVVGLTASYSYAVGDAKIEASLTRLCHELRITATETATRQELEAGGYQAMGAAAEVLLDPRPDSAGTTDDTAPAGVVPEADQKPHEMGTTFFRREAKGTSTAFTRLLMACVRSMEEATAXXXXXXXXXXXSQPHQTLLFSSPMPPSGKLAPREWGAYAHKLALKAAXXXXXXXXXXAKMPETAAGRGMGGGGDFTGNSVAKRC-TRCGIDANAGQPRRSSSRPTLHL--LLAELEHWYEAVKTMVVSWEEREDDAATILDMFGCTGSPSHRAASEAVWPSD-----VRQKISAFWEAVPRTFRRYDKLKNVLLDKYDHHGXXXXXXXXXXXKKCFRGIVFVVQRVTTHVLAHVIAADPRLAPRFSAACLYASSSPATASLSVTKAQAQASIEAFRSGSVNLLLATVVAEEGIDIPKANCVVRYDAMMHGVSMVQGRGRAREEDSSFVVLSERPDRTTADLEAVERQQQRLVWGFRPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSALNFFAQKTKAALEDGWSKGAGGQWVCTLSYESPLRELRATGTAPGKKAAKKLAA----AKLLAVL 751
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: A0A7S4V2U7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V2U7_9DINO) HSP 1 Score: 395 bits (1015), Expect = 7.110e-127 Identity = 268/592 (45.27%), Postives = 348/592 (58.78%), Query Frame = 1
Query: 1 FALSTTHKVHHVLKDHPYRKLALSLRRSSISARQSSVSLPTTALLRVVGLTASYTYAVGEAKVKASLRSMCSELLVTNLSTASPEELTGSGYHAMGASAEVKLVPSDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPSFASPLRQNGKIAARGWGAYAHRLAVGSNICGKNNGKIVSITGQDHKRRALSQCGKYASGKQVGHVTPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVPDTFPRYEHLKKVL---KEKYASHEGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKPLEDRTISPGEDALLVAQRSRERSARKVLLPAAGKVNAKVTPTLALSAINLFAKKTKVVLEENWEEVAGGFWACTLTYESPLRKLIGV-GKAPG-KKAAKVEAADALVGKL 1761
F L +VHHVLKDHPYRKLA L Q + S P RV+GLTAS TYAVGE +V+A++R +C++L + ++++A+ EEL SGYHA+ A AEV+ P D+ P +VP GVVP RKPH++ +TFF R RN T +Q+ A V ME VS + P F +PL + + WG YA+R +K R+ PL A LEHWYEA+K LVVSWEEA D A LEM G K Q+ + S AR A + FW +P++FPR+E+LK VL E +++ GG FRGIVF +QRV TH+L HVI RD ++S FRTAC+YA+S+PATASL+V+ QS+ ++ F G++NLLIAT+VAEEGMD+P NC I FD M ++VS VQ RGRARQ S+FVVLS+R DR + L VE +QL +VR F P E P + VAQRSRER+AR+VL A P+ A++A+NLF KKTK + E W + G W CTL+Y S LR + G+A +KAAK EAA ALV L
Sbjct: 109 FRLVVFDEVHHVLKDHPYRKLAQHL-------AQVNGSAP-----RVLGLTASLTYAVGEKQVEAAIRRLCTDLRIASMASATDEELRSSGYHALKAKAEVE--PVDI--PGAVPAGVVPAAWRKPHMMHETFFERLRNNTSTLAAQRLYAAVSAMEAQVSSAD--PEFRTPLHNR---SLKAWGEYANR----------------------NKDRS-----------------PLYAALEHWYEALKILVVSWEEAADAAATFLEMCGEKAAQQHLLWSQAARQ----------AQSMFWNGLPESFPRFENLKDVLLYRHESFSAATGG---------FRGIVFAQQRVMTHILEHVIRRDEELSSCFRTACIYATSSPATASLAVTAHQSKRRLDQFASGAVNLLIATSVAEEGMDVPAMNCAICFDPMLNSVSFVQRRGRARQANSAFVVLSEREDRNASKLAEVEQQQLAIVRGFNP-EKCAADPAVET--VAQRSRERNAREVLARVAA-------PSEAVAALNLFCKKTKAEVREEWGQ-QGKLWTCTLSYSSALRSVSAACGQAVADRKAAKREAAAALVETL 610
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: A0A6H5L4Y7_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y7_9PHAE) HSP 1 Score: 389 bits (998), Expect = 1.540e-125 Identity = 242/471 (51.38%), Postives = 297/471 (63.06%), Query Frame = 1
Query: 25 VHHVLKDHPYRKLALSLRRSSISARQSSVSLPTTALLRVVGLTASYTYAVGEAKVKASLRSMCSELLVTNLSTASPEELTGSGYHAMGASAEVKLVPSDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPSFASPLRQNGKIAARGWGAYAHRLAVGSNICGKNNGKIVSITGQDHKRRALSQCGKYASGKQVGHVTPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1437
VHH+LK HPYRKLA SLR + S + RV+GLTASY+Y G + KA LR++ SEL +TN+ T S +EL G HA A AEV L PS + P GV+P +R F RER E T F+ + MACVR MEKA++ E+P+FASPL +G++ A WGAYAH LA G G G ++ +Q + V P+LAELEHWYEAVK LVVSWEE EDEA IL+M GC + P D + ++ FW VP TFPR+EHLK VL +KY H G S SE FRGIVFVRQRVTTHVLAHVIA DP+MA F ACL ASS+PATASLS+S+ +Q +E+FR GS+NLL++T VAEEG+D+ ANCV+R+D++DH VS+VQGRGRAR E SSFVVL +R DRTTADLEAVE QL +RN +P
Sbjct: 8 VHHLLKGHPYRKLAQSLRHWQSRSTPSVLGTQ-----RVLGLTASYSYEFGNPRAKARLRALSSELCLTNIETVSHQELRAGGCHA--AMAEVLLPPSTV-----TPSGVLPEADRTQQPAT-MFLLRERRNEGTDFAGRIMACVRGMEKAITAVSEHPTFASPLVLDGQMKACEWGAYAHSLAYN----GAGGG------GATNRGCPTNQYSRQPQPPSVHR--PMLAELEHWYEAVKVLVVSWEEREDEAATILDMFGCTGSPSHRVAPEVVWPGD-----VRQKISVFWEAVPGTFPRFEHLKNVLLDKYDHHGGNGSGGSEGEAFRGIVFVRQRVTTHVLAHVIAADPSMAP-FSAACLCASSSPATASLSLSERATQEILEAFRSGSVNLLLSTAVAEEGIDVADANCVVRYDSIDHVVSMVQGRGRARGEKSSFVVLCERADRTTADLEAVEQRQLWQLRNIEP 447
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: A0A1Q9EU77_SYMMI (Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EU77_SYMMI) HSP 1 Score: 376 bits (966), Expect = 1.520e-119 Identity = 262/600 (43.67%), Postives = 340/600 (56.67%), Query Frame = 1
Query: 1 FALSTTHKVHHVLKDHPYRKLALSLRRSSISARQSSVSLPTTALLRVVGLTASYTYAVGEAKVKASLRSMCSELLVTNLSTASPEELTGSGYHAMGASAEVKLVPSDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPSFASPLRQNGKIAARGWGAYAHRLAVGSNICGKNNGKIVSITGQDHKRRALSQCGKYASGKQVGHVTPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQL-RLVRNFKPLEDRTISPGEDALLVAQRSRERSARKVLLPAAGKVNAKVTPTLALSAINLFAKKTKVVLEENWEEVAGGFWACTLTYESPLRKLIGVGK-------APGKKAAKVEAADALVGKLLNVLP 1776
F L +VHHVLKDHPYR+LALSL + + + ++GL+AS TYAVGE KV+ + +C EL + +++TA EEL GYH+ A ++P+ L P VP+GV+P RKPHL+ TFF R + G T F+++ + V+ +E V+ F SPL+ A R WG YAH+ + C K LA LEHWYEA++ LV SWEEAED AV L+M G + +AG P EA L FW + + FPR+EHLK L ++A+ S FRGI+FV+QR+ THVL HVI D + S F+ AC+YA+S+PATAS SVS A S+A + F +GS+NLLIAT VAEEGMD+P ANCVIRFD M ++VS VQGRGRARQE SSFVVLS+R DR T+ L AVE++QL ++VR+F P T + E A AQRSRER+AR+VLL + T AL+A+NL+ KKTKV L+E G + C+L YES LR + G A GKK AK AA AL+ KL P
Sbjct: 109 FKLVVFDEVHHVLKDHPYRRLALSLSKLQLGPQ-------------ILGLSASLTYAVGEGKVQKDVTRICRELQIRHMATAGGEELATGGYHSKAAEP---VLPAKL--PSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVQCLETTVAAVDS--GFKSPLQNP---APRTWGDYAHKR--------------------------IPTCSK-------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVGERE------PTAGLWPP-----VAEATLAQFWHEAGEYFPRFEHLKDALLYEHATLSRTHGS------FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASYSVSAADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMINSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEKIVRSFNPERVATDTRNETA---AQRSRERNAREVLLTSDN------ASTNALAALNLYCKKTKVELQEE-HSTDGKDFTCSLKYESVLRSVEATGSYGLKCRAAEGKKQAKRAAAAALLEKLSQQEP 619
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: D7FR00_ECTSI (ATP-dependent RNA helicase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR00_ECTSI) HSP 1 Score: 381 bits (978), Expect = 3.410e-117 Identity = 233/472 (49.36%), Postives = 292/472 (61.86%), Query Frame = 1
Query: 34 VLKDHPYRKLALSLRRSSISARQSSVSLPTTALLRVVGLTASYTYAVGEAKVKASLRSMCSELLVTNLSTASPEELTGSGYHAMGASAEVKLVPSDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPSFASPLRQNGKIAARGWGAYAHRLA---VGSNICGKNNGKIVSITGQDHKRRALSQCGKYASGKQVGHV-TPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKP 1437
+LK HPYR+LA SL + + S++ RV+GLTASY+Y G AK + LR + SEL +TN+ TAS +EL G H + EV L PS + P GV+ NR TF RER E T FS++ M CVR MEKA++ E+P+FASPL +G++ R WGAYAH LA G + +Y+ Q V P+LAELEHWYEAV+ LVVSWEE EDEA +IL+M GC A P D + +++FW VP FPR+EHLKKVL +KY H G S S+ F GIVFVRQR+TTHVLAHVIA DP MA F ACLYASS+P TASLS+S+ ++ ++E+FR GS+NLL++T VAEEG+D+P ANCV+R+D MDHAVS+VQGRGRAR SSFVVL +R DRTTADLEAVE QL +RN +P
Sbjct: 1 MLKKHPYRELAQSLCYWRLQSPPSALGTQ-----RVLGLTASYSYEFGNAKAEDRLRQLLSELCITNIETASGQELEAGGCHDVVT--EVLLPPST-----ATPSGVLLEANRTQQQAT-TFLLRERRHEGTDFSRRIMICVRSMEKAITAVSEHPAFASPLVLDGQMKTREWGAYAHSLAHNGAGXXXXXXXXXXXXXXXXXXGATNRGCRTNRYSRQPQPPSVHRPMLAELEHWYEAVRALVVSWEEREDEAAIILDMFGCTGSPSHRAPPEAVWPGD-----VRQKISAFWEAVPRMFPRFEHLKKVLLDKYDHHGGDGSGSSDGEAFLGIVFVRQRMTTHVLAHVIAADPRMAPRFSAACLYASSSPTTASLSLSERDTEENLEAFRSGSVNLLLSTCVAEEGIDVPDANCVVRYDPMDHAVSMVQGRGRARGAESSFVVLCERADRTTADLEAVEQRQLWHLRNMEP 454
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: A0A812TEW1_9DINO (DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TEW1_9DINO) HSP 1 Score: 376 bits (965), Expect = 6.040e-115 Identity = 261/595 (43.87%), Postives = 339/595 (56.97%), Query Frame = 1
Query: 1 FALSTTHKVHHVLKDHPYRKLALSLRRSSISARQSSVSLPTTALLRVVGLTASYTYAVGEAKVKASLRSMCSELLVTNLSTASPEELTGSGYHAMGASAEVKLVPSDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPSFASPLRQNGKIAARGWGAYAHRLAVGSNICGKNNGKIVSITGQDHKRRALSQCGKYASGKQVGHVTPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQL-RLVRNFKPLEDRTISPGEDALLVAQRSRERSARKVLLPAAGKVNAKVTPTLALSAINLFAKKTKVVLEENWEEVAGGFWACTLTYESPLRKLIGVGK-------APGKKAAKVEAADALVGKL 1761
F L +VHHVLKDHPYR+LALSL + + + ++GL+AS TYAVGE KV+ + +C EL + +++TA EEL GYH+ A ++P+ L P VP+GV+P RKPHL+ TFF R + G T F+++ + V+ +E V+ F SPL+ A R WG YAH+ + C K LA LEHWYEA++ LV SWEEAED AV L+M G + +AG P EA L FW + + FPR+EHLK L ++A+ S FRGI+FV+QR+ THVL HVI D + S F+ AC+YA+S+PATAS SVS A S+A + F +GS+NLLIAT VAEEGMD+P ANCVIRFD M ++VS VQGRGRARQE SSFVVLS+R DR T+ L AVE++QL ++VR+F P T + E A AQRSRER+AR+VLL + T AL+A+NL+ KKTKV L+E G + C+L YES LR + G A GKK AK AA AL+ KL
Sbjct: 109 FKLVVFDEVHHVLKDHPYRRLALSLSKLQLGPQ-------------ILGLSASLTYAVGEGKVQKDVTRICRELQIRHMATAGGEELATGGYHSKAAEP---VLPAKL--PSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVQCLETTVAAVDS--GFKSPLQNP---APRTWGDYAHKR--------------------------IPTCSK-------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVGERE------PTAGLWPP-----VAEATLAQFWHEAGEYFPRFEHLKDALLYEHATLSRTHGS------FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASYSVSAADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMINSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEKIVRSFNPERVATDTRNETA---AQRSRERNAREVLLTSDN------ASTNALAALNLYCKKTKVELQEE-HSTDGKDFTCSLKYESVLRSVEATGSYGLKCRAAEGKKQAKRAAAAALLEKL 614
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: A0A812RBN0_9DINO (DCL2A protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RBN0_9DINO) HSP 1 Score: 357 bits (916), Expect = 5.800e-112 Identity = 255/594 (42.93%), Postives = 327/594 (55.05%), Query Frame = 1
Query: 1 FALSTTHKVHHVLKDHPYRKLALSLRRSSISARQSSVSLPTTALLRVVGLTASYTYAVGEAKVKASLRSMCSELLVTNLSTASPEELTGSGYHAMGASAEVKLVPSDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPSFASPLRQNGKIAARGWGAYAHRLAVGSNICGKNNGKIVSITGQDHKRRALSQCGKYASGKQVGHVTPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKPLEDRTISPGEDALLVAQRSRERSARKVLLPAAGKVNAKVTPTLALSAINLFAKKTKVVLEENWEEVAGGFWACTLTYESPLRKLIGVGK-------APGKKAAKVEAADALVGKL 1761
F L +VHHVLK+HPYR+LALSL R Q V+GL+AS TYAVGE +V+ L + EL + +++TA+ EL GYH+ A + P+ L P SVP+GV+P+ RKPHL+ FF R + G T F+Q+ ++ VR ME AV+ E F SPL+ A R WG YAHR + Q K+AS LEHWYEA++ LV SWEEAED A L M G G + +EAA FW D+FPR EHLK L +Y E+ + +FR I+FV+QR+ TH+L H + D +A+ AC+YA+++PAT S VS A S+A + SF +G INLLIAT VAEEGMD+P ANCVIRFD M ++VSLVQGRGRARQ SSFVVL +R DR T+ L AVE++QL ++RNFKP D +D+ AQRSRER+AR+VLL A G N A +NL+ KKTKV L+E + G C L YES LR + G A G+K AK AA AL+ L
Sbjct: 125 FKLVVFDEVHHVLKEHPYRQLALSLSRLPAGPPQ------------VLGLSASLTYAVGEQRVEQELARISRELRIQHMATATAWELEAGGYHSKAGQATL---PTWNL-PCSVPEGVLPIGERKPHLMAKKFFDRLQEGASTPFTQRLLSVVRAMESAVA--SEDSGFKSPLQNP---APRMWGDYAHRR--------------------------VGQSAKFAS-------------LEHWYEALRMLVTSWEEAEDAATTYLRMVG-----------EGQSKPFTWPSEVEAASAQFWHNSADSFPRLEHLKDALLYEY------ETLSTTHGSFRCILFVQQRIMTHILEHFVRTDEALANRLNPACIYATASPATPSFRVSAADSKARLASFAKGGINLLIATVVAEEGMDVPAANCVIRFDPMINSVSLVQGRGRARQPDSSFVVLCERQDRPTSTLAAVEAQQLEIIRNFKP--DHVADATQDS--AAQRSRERNAREVLL-APGASN-------ATEVLNLYCKKTKVQLQEEFVPT-GPEIECRLKYESILRSVQAAGSSGPFSRAAEGRKQAKRMAAAALLAAL 628
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: A0A812IWI1_SYMPI (CFAP61 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IWI1_SYMPI) HSP 1 Score: 359 bits (922), Expect = 2.820e-105 Identity = 263/609 (43.19%), Postives = 332/609 (54.52%), Query Frame = 1
Query: 1 FALSTTHKVHHVLKDHPYRKLALSLRRSSISARQSSVSLPTTALLRVVGLTASYTYAVGEAKVKASLRSMCSELLVTNLSTASPEELTGSGYHAMGASAEVKLVPSDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPSFASPLRQNGKIAARGWGAYAHRLAVGSNICGKNNGKIVSITGQDHKRRALSQCGKYASGKQVGHVTPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVPDTFPRYEHLKKVLK---EKYASHEGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQL------------RLVRNFKPLEDRTISPGEDALLVAQRSRERSARKVLLPAAGKVNAKVTPTLALSAINLFAKKTKVVLEENWEEVAGGFWACTLTYESPLRKLIGVGK-------APGKKAAKVEAADALVGKL 1761
F L +VHHVLKDHPYRKLALSL + + Q V+GL+AS TYA+GE KV++ L +C EL + +++TAS EL GYH+ A A ++P L P P+GV+PV RKPHL+ F+ R + G+ T F++Q ++ VR ME AV+ SF SPL+ A R WG YA++ + Q + S LEHWYEA++ LV SWEEAED A L M G RL + GA P + +E A FW K PD+FPR+EHLK L EK + G +FRGIVFV+QR+ TH+L H+I D +AS AC+YA+++PAT S VS A S+A + F G INLLIAT VAEEGMD+P ANCVIRFD M +AVS VQGRGRARQ SSFVVLS+R DR T+ L AVE++QL R+V+NF P + T S D L AQ+SRER+AR+VL N A+ +NL+ KKTKV L E V F C L YES LR + G A GKK AK AA AL+ L
Sbjct: 2099 FKLVVFDEVHHVLKDHPYRKLALSLSKLTDGRPQ------------VLGLSASLTYAIGERKVESDLTRICRELNIQHMATASENELEACGYHSRPAEA---VLPVSL--PNVTPEGVLPVERRKPHLMASKFWERAQQGKSTQFTKQLLSVVRLMEAAVAEVDA--SFESPLQHP---APRTWGEYANKR--------------------------IPQSANFMS-------------LEHWYEALRMLVTSWEEAEDAATTYLRMVGQTRL------TVGAWPLE-----VETACVRFWEKRPDSFPRFEHLKDALLYELEKLSKLHG---------SFRGIVFVQQRIMTHILEHLIQNDGDLASKLTPACIYATTSPATPSFRVSAADSKARLAEFANGRINLLIATVVAEEGMDVPAANCVIRFDPMINAVSFVQGRGRARQADSSFVVLSERQDRPTSTLAAVEAQQLQKLRPTFESSFGRIVQNFNP-DCATRSASTD--LAAQQSRERNAREVLQ------NVARAGANAVGLLNLYCKKTKVELHEELNLVGSEF-TCVLKYESILRSVQATGSSGPFSRAADGKKQAKRNAAAALLETL 2616
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: A0A813AFJ5_9DINO (DCL2A protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813AFJ5_9DINO) HSP 1 Score: 323 bits (829), Expect = 2.170e-101 Identity = 228/521 (43.76%), Postives = 292/521 (56.05%), Query Frame = 1
Query: 235 LSTASPEELTGSGYHAMGASAEVKLVPSDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPSFASPLRQNGKIAARGWGAYAHRLAVGSNICGKNNGKIVSITGQDHKRRALSQCGKYASGKQVGHVTPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVPDTFPRYEHLKKVLKEKYASHEGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNFKPLEDRTISPGEDALLVAQRSRERSARKVLLPAAGKVNAKVTPTLALSAINLFAKKTKVVLEENWEEVAGGFWACTLTYESPLRKLIGVGK-------APGKKAAKVEAADALVGKLLNVLP 1776
++TA EEL GYH+ A ++P+ L P VP+GV+P RKPHL+ TFF R + G T F+++ + VR +E AV+ SF SPL+ A R WG YAH+ + C K LA LEHWYEA++ LV SWEEAED AV L+M G + +AG P EA L FW + + FPR+EHLK L ++A+ S FRGI+FV+QR+ THVL HVI D + S F+ AC+YA+S+PATAS +A S+A + F +GS+NLLIAT VAEEGMD+P ANCVIRFD M +VS VQGRGRARQE SSFVVLS+R DR T+ L AVE++QL +VR+F P T + E A AQRSRER+AR+V+L + T AL+A+NL+ KKTKV L+E G + C+L YES LR + G A GKK AK AA AL+ KL P
Sbjct: 1 MATAGGEELATGGYHSKAAEP---VLPAKL--PSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVRCLETAVAAVDS--SFKSPLQNP---APRTWGDYAHKR--------------------------IPTCSK-------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVGERE------PAAGLWPP-----VAEATLAQFWHEAVECFPRFEHLKDTLLYEHATLSRTHGS------FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASY---RADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMISSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEIVRSFNPERVATDTRNETA---AQRSRERNAREVMLTSDN------ASTNALAALNLYCKKTKVELQEE-HSTDGKDFTCSLKYESVLRSVEATGSYGLKCRAAEGKKQAKRAAAAALLEKLSQQEP 442
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Match: A0A7S1FQB5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQB5_9STRA) HSP 1 Score: 278 bits (712), Expect = 2.340e-80 Identity = 211/596 (35.40%), Postives = 308/596 (51.68%), Query Frame = 1
Query: 22 KVHHVLKDHPYRKLALSLRRSSISARQSSVSLPTTALLRVVGLTASYTYAVGEAKVKASLRSMCSELLVTNLSTASPEELTGSGYHAMGASAEVKLVPSDLLSPLSVPKGVVPVINRKPHLIRDTFFRRERNGECTAFSQQFMACVREMEKAVSFSGEYPS-FASPLRQNGKIAARGWGAYAHRLAVGSNICGKNNGKIVSITGQDHKRRALSQCGKYASGKQVGHVTPLLAELEHWYEAVKTLVVSWEEAEDEAVMILEMGGCKRLQRMVASSAGARPTDKANATLEAALTSFWMKVP--DTFPRYEHLKKVLKEKYASHEGGESSESEQHTFRGIVFVRQRVTTHVLAHVIARDPTMASLFRTACLYASSAPATASLSVSQAQSQASIESFREGSINLLIATNVAEEGMDIPTANCVIRFDAMDHAVSLVQGRGRARQEGSSFVVLSQRTDRTTADLEAVESEQLRLVRNF------KPLEDRTISPGEDALLVAQRSRERSARKVLLPAAGKVNAKVTPTLALSAINLFAKKTKVVLEENWEEV-AGGFWACTLTYESPLRKLI-GVGKAPGKKAAKVEAADALVGKLLNVLP 1776
+VHHVLK+HPYRK+ALS+ ++ S T ++VGLTAS +Y+V +A +K +R++ +E+ + L TA+PEEL GYH+ A+ E+ L L P +RKPHL+ +TF+RR CT +++ + ++ E A+ E PS F SPL + ++ WG H++A Q R G++ ELE WYE+++ L++SWEE + +V+ L+M N F+ K D + R LKKVL +K + S S F GIVFV+QRVT H++ + RD T+++ ++A LYA S+PAT SLS+++ + + + FR+G +NLL++T VAEEG+D+P+ANCVIRFD + +AVS VQGRGRARQE SSFVVL +R DR TA L+ VE +QLR+ +F P E + GE + AQ++RE SA +L + A + + KTK L W+E + C TYES + G+GK KK AK AA L+ KL +P
Sbjct: 151 EVHHVLKEHPYRKIALSVASANAKRAPSEPRSRT----QMVGLTASLSYSVSDAAIKRCIRTLMTEMQMDALCTATPEELLAGGYHSHAAAPEIALDDVHL--------EACPPADRKPHLMLETFWRRVEGKGCTEYAEDLLRAIKRREGALR--RERPSDFRSPLAEP-ELKMADWGVRMHKMA------------------QRFDREDPGVAGRFR-------------ELEQWYESLRILIISWEENREGSVLFLKM--------------------MLNDDERKESAEFFHKHDREDIYVRLTQLKKVLLDKTSV------SNSSNADFCGIVFVQQRVTAHIIDFYLKRDRTLSARIKSAFLYAVSSPATPSLSLNKGTANSVLHDFRKGKLNLLVSTVVAEEGLDVPSANCVIRFDPVLNAVSHVQGRGRARQELSSFVVLQERKDRPTAMLQKVEEKQLRIASSFHTFSELSPEERVKVKTGE---IEAQKNRETSAMSLL--------GRKGEEEAYQDVLQYCAKTKAELGVTWDETDETDKFLCHCTYESETGSSVEGIGKGKQKKIAKKRAAWDLINKLKASVP 663 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70285.14686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70285.14686.1 >prot_H-elongata_contig70285.14686.1 ID=prot_H-elongata_contig70285.14686.1|Name=mRNA_H-elongata_contig70285.14686.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=595bp FALSTTHKVHHVLKDHPYRKLALSLRRSSISARQSSVSLPTTALLRVVGLback to top mRNA from alignment at H-elongata_contig70285:1288..3072- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70285.14686.1 ID=mRNA_H-elongata_contig70285.14686.1|Name=mRNA_H-elongata_contig70285.14686.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1785bp|location=Sequence derived from alignment at H-elongata_contig70285:1288..3072- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70285:1288..3072- >mRNA_H-elongata_contig70285.14686.1 ID=mRNA_H-elongata_contig70285.14686.1|Name=mRNA_H-elongata_contig70285.14686.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3570bp|location=Sequence derived from alignment at H-elongata_contig70285:1288..3072- (Himanthalia elongata Himel1 dioecious)back to top |