mRNA_H-elongata_contig70278.14684.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig70278.14684.1
Unique NamemRNA_H-elongata_contig70278.14684.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: D8LIX8_ECTSI (Putative Glutathione S-transferase putative Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIX8_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 1.030e-127
Identity = 180/232 (77.59%), Postives = 202/232 (87.07%), Query Frame = 1
Query:    4 TSLAASFNPFDGLGKSVGNMFSGATGSVPDDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSGTNSASFVAAADKVNEALGEGGGPYFLGE 699
            ++LAASFNPF GLGKSV +M +GATGSVP DFEDKAPSWE LE +L+ERQT EE++   LR RGYGPTSALA LRLFDAPEGTEPRVTLYRDHA WCPYCEKVWL LEEKRIPY+V+KVPMRCYGDKP WF ++SPSGA+PVA+IDGRIISESNVIMQVLEATF +NNPLLPA  SP A R + LL LEREIFSAWFRW+TSS   SA+F A+ADKV +AL +GGGPYFLG+
Sbjct:   60 STLAASFNPFAGLGKSVNSMLAGATGSVPADFEDKAPSWERLEAMLEERQTPEEREAVALRERGYGPTSALANLRLFDAPEGTEPRVTLYRDHAGWCPYCEKVWLLLEEKRIPYRVKKVPMRCYGDKPRWFSEVSPSGAVPVAEIDGRIISESNVIMQVLEATFTENNPLLPAPGSPQAGRAESLLGLEREIFSAWFRWITSSNPTSAAFEASADKVEKALKDGGGPYFLGK 291          
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A6U2EXV2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2EXV2_HEMAN)

HSP 1 Score: 256 bits (653), Expect = 4.580e-79
Identity = 126/194 (64.95%), Postives = 147/194 (75.77%), Query Frame = 1
Query:  103 DKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSS----GTNSASFVAAADKVNEALGE 672
            DKAPSW  L+T+L+++QT+EE+D       G   T +LA LR+FDAP+GTEPRVTLYRD AAWCPYCEKVWLQLEEKRIPYKVEKV MRCYGDKP WF ++ PSG IPVA+IDGR+I+ESN IMQ LE TFPD+NPL P A+ P A RV  LLRLEREIFSAWFRWL SS         +F    D+V+  L +
Sbjct:  100 DKAPSWTDLKTMLEKQQTQEERDFRSQLASGRSKTHSLATLRMFDAPDGTEPRVTLYRDVAAWCPYCEKVWLQLEEKRIPYKVEKVNMRCYGDKPDWFMRMQPSGGIPVAKIDGRVITESNDIMQALEDTFPDHNPLTPDASDPQAPRVRGLLRLEREIFSAWFRWLVSSTRAGDAQQKNFEGLMDRVDAELAQ 293          
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A4D9D8Z5_9STRA (GST N-terminal domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8Z5_9STRA)

HSP 1 Score: 252 bits (643), Expect = 8.690e-78
Identity = 133/239 (55.65%), Postives = 159/239 (66.53%), Query Frame = 1
Query:   10 LAASFNPFDGLGKSVGNMFSGAT-GSVP-----DDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLT-SSGTNSAS---FVAAADKVNEALGEGGGPYFLG 696
            L  S      LG     M SG   GS P      DF+D APSW  L+  L +RQT EE+    LR  G GP S+ A +RLFDAP+G EPRVTLYRD AAWCPYCEKVW+ LEEKRIPY+V+KVPMRCYG KP+WF ++S +G +PV ++DG ++ ES+VI+Q LE  FP+  PLLP A+ P A  V PLLRLERE+FS W RWLT S+ TN  S   F     +V  AL E GGPYFLG
Sbjct:   47 LKPSLTRHSSLGGMFTQMLSGMVKGSAPPPAGMSDFKDPAPSWADLKASLSQRQTPEERGLPDLRAAGRGPPSSKAEIRLFDAPDGYEPRVTLYRDTAAWCPYCEKVWMYLEEKRIPYRVKKVPMRCYGQKPAWFSRLSATGLLPVMELDGDVVIESDVIIQTLEDKFPEAVPLLPLASDPDAAAVGPLLRLERELFSGWLRWLTGSTSTNERSKMVFEGVLGRVEAALRERGGPYFLG 285          
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A7S0M898_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M898_9CRYP)

HSP 1 Score: 236 bits (603), Expect = 7.770e-73
Identity = 131/244 (53.69%), Postives = 157/244 (64.34%), Query Frame = 1
Query:   40 LGKSVGNMFSGATGSV-------PDD----FEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWL-TSSGTNSA------SFVAAADK-------VNEALGEGGGPYFLG 696
            LG  +G + S   G +       PDD     ED APSW  L+++L++ QT+EE+        G G  +A+A +RLF AP+GTEPRV LYRD+AAWCPYCEKVW+ LEEK+IPYKVEKV MRCYGDKP WF +ISP G IPVA+IDGR+ISESN IMQ LE  FP    +LPAA  P   RV PLLRLER+IFSAWFRWL T S    A      S +   D+       +  A G G G +FLG
Sbjct:   61 LGGIIGGLTSVLRGGMKSAPNTNPDDPSARSEDTAPSWGELKSMLEDSQTEEERRFRSELAAGRGNANAMASIRLFGAPDGTEPRVLLYRDYAAWCPYCEKVWIMLEEKKIPYKVEKVNMRCYGDKPDWFMRISPGGGIPVAKIDGRVISESNDIMQALEDDFPSYRAMLPAAGDPHGPRVAPLLRLERQIFSAWFRWLVTPSREGDAMQLGFESLLTQVDRELQQARDMAAAAGAGPGGFFLG 304          
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A7S0I190_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I190_9CRYP)

HSP 1 Score: 224 bits (570), Expect = 2.060e-70
Identity = 113/197 (57.36%), Postives = 137/197 (69.54%), Query Frame = 1
Query:  151 QTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSGTNSAS----FVAAADKVNEALGEGG----------GPYFLGE 699
            QT+EE+        G GPT+  A +RLFDAP+GTEPRV LYRD AAWCPYCEKVWL LEEKR+PY+VEKV MRCYGDKP WF ++ PSG IPVA++DGR+I+ESN IMQ LE  FP N P+LPA++ P A RV  LLRLER+IFS+WFRWL S   +  S    F A   +V++ L E            G +FLG+
Sbjct:   13 QTQEERSWSSTVASGRGPTNHQASIRLFDAPDGTEPRVILYRDKAAWCPYCEKVWLHLEEKRVPYRVEKVNMRCYGDKPDWFMRMQPSGGIPVAKVDGRVITESNDIMQALEDVFPQN-PMLPASSDPQAPRVGKLLRLERQIFSSWFRWLVSPSRSGDSQQINFEALLSEVDQQLKEANDIAVANGHQEGRFFLGD 208          
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A6U6AAK3_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6AAK3_GUITH)

HSP 1 Score: 230 bits (587), Expect = 4.000e-69
Identity = 123/241 (51.04%), Postives = 155/241 (64.32%), Query Frame = 1
Query:   31 FDGLGKSVGNMFSGATGSVPDD----FEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSG----TNSASFVAAADKVNEALGEGG----------GPYFLGE 699
            F GL + +     G   S  DD    ++D+APSWE L+  L   QT EE+    +   G GP +  A +RLF+A + TEPRV LYRD AAWCPYCEKVWL LEEKR+PY+VEKV MRCYGDKP WF ++ PSG IPVA+IDG++I+ESN IMQ LE  FP N P+LPA++ P A RV  LLRLER+IFS+WFRWL S      +   +F +   +V+E L E            G +FLG+
Sbjct:   89 FGGLVEGMDKFLRGGGESSSDDPNSPWKDQAPSWEDLQQKLASLQTAEERSWPSVVASGRGPANHQASVRLFEASDDTEPRVILYRDKAAWCPYCEKVWLHLEEKRVPYRVEKVNMRCYGDKPDWFMRMQPSGGIPVAKIDGQVITESNDIMQTLEDVFPQN-PMLPASSDPQAPRVGKLLRLERQIFSSWFRWLVSPSRFGDSQQINFESLLSQVDEELKEANDIAVANGHKEGRFFLGD 328          
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A7S4B4Q9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B4Q9_CHRCT)

HSP 1 Score: 222 bits (566), Expect = 1.520e-68
Identity = 119/233 (51.07%), Postives = 151/233 (64.81%), Query Frame = 1
Query:   16 ASFNPFDGLGKSVGNMFS-GATGSVPDDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGP-TSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSS---GTNSASFVAAADKVNEALGEGGGPYFLGE 699
            A   P  GLG    NM   G+T S     +D+APSW++L  LL ++ + +E+        G  P  SALA +RLF   E    R+TLYRD AAWCPYCEKVWL LEEK++PY VEKV M CYGDKP+WF  + PSG IPVA++DG++I ESN IM  +E  +P+  P+LP   S  AV V PLL LER++FS+WFRWLTS    G    +F+A  D+V+ AL   GGP+FLGE
Sbjct:   18 AMVKPGGGLGGMFQNMVKLGSTASSAAVVQDRAPSWDTLTALLHDQSSADERSFRQQLHDGTLPHASALAKMRLFGKSEADASRITLYRDTAAWCPYCEKVWLLLEEKQVPYMVEKVNMNCYGDKPAWFWAMQPSGGIPVAKVDGKVIRESNDIMMAIEQAYPER-PMLPREDSAKAVAVRPLLTLERQLFSSWFRWLTSGMNDGAQRHNFLALMDEVDAALAAQGGPFFLGE 249          
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A7S4EUZ7_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EUZ7_CHRCT)

HSP 1 Score: 222 bits (566), Expect = 1.070e-66
Identity = 119/233 (51.07%), Postives = 151/233 (64.81%), Query Frame = 1
Query:   16 ASFNPFDGLGKSVGNMFS-GATGSVPDDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGP-TSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSS---GTNSASFVAAADKVNEALGEGGGPYFLGE 699
            A   P  GLG    NM   G+T S     +D+APSW++L  LL ++ + +E+        G  P  SALA +RLF   E    R+TLYRD AAWCPYCEKVWL LEEK++PY VEKV M CYGDKP+WF  + PSG IPVA++DG++I ESN IM  +E  +P+  P+LP   S  AV V PLL LER++FS+WFRWLTS    G    +F+A  D+V+ AL   GGP+FLGE
Sbjct:   18 AMVKPGGGLGGMFQNMVKLGSTASSAAVVQDRAPSWDTLTALLHDQSSADERSFRQQLHDGTLPHASALAKMRLFGKSEADASRITLYRDTAAWCPYCEKVWLLLEEKQVPYMVEKVNMNCYGDKPAWFWAMQPSGGIPVAKVDGKVIRESNDIMMAIEQAYPER-PMLPREDSAKAVAVRPLLTLERQLFSSWFRWLTSGMNDGAQRHNFLALMDEVDAALAAQGGPFFLGE 249          
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A0G4EGA8_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGA8_VITBC)

HSP 1 Score: 222 bits (566), Expect = 1.680e-66
Identity = 116/219 (52.97%), Postives = 148/219 (67.58%), Query Frame = 1
Query:   61 MFSGATGSVPDDFEDKAPSWESLETLLQERQTKEEKDEGVLRGRGYGP-TSALAGLRLFDAP-EGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSGTNS---ASFVAAADKVNEALGE-GGGPYFLGE 699
            +F  +  + P    D+APSW  L ++L    T+EE+    +R +G GP  +  A +RLFD+  E    RVTLYRD AAWCPYCEKVWLQLEEK+IPY+VEKVP+RCYG KP WF  I P G +PV +IDG++I+ESN IMQ +E  FPD+ PLLP   +  +  V PLLRLER++FSAW  WLTSSG +    A FV   D V++AL +   GPYFLG+
Sbjct:   53 LFGKSAPNAPTLQNDRAPSWAELSSML----TQEERAFNAMRDQGRGPYPTPWASIRLFDSTDEKAADRVTLYRDSAAWCPYCEKVWLQLEEKQIPYRVEKVPLRCYGAKPRWFLDICPGGMLPVCKIDGQVITESNDIMQAIEERFPDHKPLLPKPGTEKSSAVGPLLRLERQLFSAWLGWLTSSGPSDRMKAQFVQTMDSVDKALDQFDDGPYFLGD 267          
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Match: A0A8J5XKW8_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKW8_DIALT)

HSP 1 Score: 217 bits (553), Expect = 1.440e-64
Identity = 113/198 (57.07%), Postives = 132/198 (66.67%), Query Frame = 1
Query:  103 DKAPSWESLETLLQERQTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPYCEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRIISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRWLTSSGTNSASFVAAADKVNEALGEGGGPYFLG 696
            D APSW+ L  L  +   +  + E   +  G G  +  + +RLFDAPEGTEPRV L+RD AAWCPYC+KVW  LE KRIPYKV KVPM CYGDKP+ FR+ISPSGAIPVA IDGRII ESN IM  LE  FP   P+LP A S  A R   L+ LER +FSAWF WL S+   S  F AA ++V   L   GGP+FLG
Sbjct:   61 DAAPSWDELRVLSAKAGGERFRAEWDAQAVGRGAANHQSSIRLFDAPEGTEPRVELFRDTAAWCPYCQKVWCLLEAKRIPYKVSKVPMSCYGDKPAAFRRISPSGAIPVAIIDGRIIPESNDIMYALEEIFPQT-PMLPPAGSAEAARARELMALERTLFSAWFGWLRSAQDGSGRFEAAMERVCAELQRSGGPFFLG 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70278.14684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIX8_ECTSI1.030e-12777.59Putative Glutathione S-transferase putative Glutat... [more]
A0A6U2EXV2_HEMAN4.580e-7964.95Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A4D9D8Z5_9STRA8.690e-7855.65GST N-terminal domain-containing protein n=2 Tax=M... [more]
A0A7S0M898_9CRYP7.770e-7353.69Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0I190_9CRYP2.060e-7057.36Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A6U6AAK3_GUITH4.000e-6951.04Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S4B4Q9_CHRCT1.520e-6851.07Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4EUZ7_CHRCT1.070e-6651.07Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A0G4EGA8_VITBC1.680e-6652.97Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A8J5XKW8_DIALT1.440e-6457.07Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70278contigH-elongata_contig70278:657..2764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.4
Seed ortholog evalue3.5e-54
Seed eggNOG ortholog2903.EOD33534
KEGG rclassRC00004,RC00069,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00980,ko00982,ko00983,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00980,map00982,map00983,map01524,map05200,map05204,map05225,map05418
EggNOG free text desc.chloride channel activity
EggNOG OGsKOG1422@1,KOG1422@2759
EC2.5.1.18
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGlutathione S-transferase
Ec32 orthologEc-20_001960.1
Exons6
Model size699
Cds size699
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70278.14684.1prot_H-elongata_contig70278.14684.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig70278 657..2764 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931100.8592708-CDS-H-elongata_contig70278:656..7791622931100.8592708-CDS-H-elongata_contig70278:656..779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 657..779 +
1691679698.3025644-CDS-H-elongata_contig70278:656..7791691679698.3025644-CDS-H-elongata_contig70278:656..779Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 657..779 +
1622931100.8901892-CDS-H-elongata_contig70278:1075..12051622931100.8901892-CDS-H-elongata_contig70278:1075..1205Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 1076..1205 +
1691679698.3121614-CDS-H-elongata_contig70278:1075..12051691679698.3121614-CDS-H-elongata_contig70278:1075..1205Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 1076..1205 +
1622931100.9042928-CDS-H-elongata_contig70278:1447..15511622931100.9042928-CDS-H-elongata_contig70278:1447..1551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 1448..1551 +
1691679698.3197892-CDS-H-elongata_contig70278:1447..15511691679698.3197892-CDS-H-elongata_contig70278:1447..1551Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 1448..1551 +
1622931100.923076-CDS-H-elongata_contig70278:1827..19471622931100.923076-CDS-H-elongata_contig70278:1827..1947Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 1828..1947 +
1691679698.3275487-CDS-H-elongata_contig70278:1827..19471691679698.3275487-CDS-H-elongata_contig70278:1827..1947Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 1828..1947 +
1622931100.9439273-CDS-H-elongata_contig70278:2179..22921622931100.9439273-CDS-H-elongata_contig70278:2179..2292Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 2180..2292 +
1691679698.3376517-CDS-H-elongata_contig70278:2179..22921691679698.3376517-CDS-H-elongata_contig70278:2179..2292Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 2180..2292 +
1622931100.9613726-CDS-H-elongata_contig70278:2655..27641622931100.9613726-CDS-H-elongata_contig70278:2655..2764Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 2656..2764 +
1691679698.345618-CDS-H-elongata_contig70278:2655..27641691679698.345618-CDS-H-elongata_contig70278:2655..2764Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig70278 2656..2764 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig70278.14684.1

>prot_H-elongata_contig70278.14684.1 ID=prot_H-elongata_contig70278.14684.1|Name=mRNA_H-elongata_contig70278.14684.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=233bp
KTSLAASFNPFDGLGKSVGNMFSGATGSVPDDFEDKAPSWESLETLLQER
QTKEEKDEGVLRGRGYGPTSALAGLRLFDAPEGTEPRVTLYRDHAAWCPY
CEKVWLQLEEKRIPYKVEKVPMRCYGDKPSWFRQISPSGAIPVAQIDGRI
ISESNVIMQVLEATFPDNNPLLPAATSPLAVRVDPLLRLEREIFSAWFRW
LTSSGTNSASFVAAADKVNEALGEGGGPYFLGE
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mRNA from alignment at H-elongata_contig70278:657..2764+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig70278.14684.1 ID=mRNA_H-elongata_contig70278.14684.1|Name=mRNA_H-elongata_contig70278.14684.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2108bp|location=Sequence derived from alignment at H-elongata_contig70278:657..2764+ (Himanthalia elongata Himel1 dioecious)
AAGACTAGCCTGGCGGCTTCCTTTAACCCTTTTGACGGCCTGGGCAAGAG CGTTGGAAACATGTTCTCCGGTGCCACAGGTTCCGTGCCCGATGACTTCG AGGACAAGGCTCCTTCCTGGGAGGTGAGTGCCGGTACAACGATTGACTCG GGACGTATGGAGGCTCGCTTCTTCATTCACAACGCGCGTGATACCTCGAC GGCGTCTCTTGGATTCTTGTTGTTTTCGCGCGAAAAACGATTCTGCTCCC GCGATTAGTGACCCTCTGCTTGTGGCGTGTTTTGGAGTGGTGTGGCGTTA GCATAGCACCGTTCTGTTGTGTCCTTTTGTCGCTTGCCGTAGGCCAAGTC TTCCCATATTCCGCGTGCGATGATGATGACGATGACGGTAAACGGTAACA ATGACGGTAACAACCGCAGAGCTTGGAGACACTGCTACAAGAAAGGCAGA CAAAGGAAGAGAAAGACGAGGGTGTGCTTAGAGGACGAGGCTACGGGCCG ACCAGTGCACTCGCCGGTCTCCGCCTGTTCGACGCCCCGGAAGGAACCGG TGCGGACAACCGCGGCTGCCGGGAATCATCGTAACGTTCAATGACAGTTA AACGCCTTCGGTGCCGATATGGGGGTAGACCGGGGTGGGCCCGGGCGGGA TCTAATGATTACCGATGCCTTAACTCTGCTTTGTGACTACTTTAAGAAAT TGAAGCGCGGCCTATCGCTAAGAAGCGCAAGGCCGATATCCTTCCCAATC TTGTGTGCGTGTGCGTGTCCATCTGATGCGCGTTGGTGTAGAACCTCGCG TGACGCTTTACCGAGACCACGCTGCCTGGTGCCCGTACTGCGAGAAAGTT TGGCTGCAGTTGGAGGAGAAACGGATACCCTACAAGGTGGAGAAGGTGCG CGCTCACTTTCCCCCTGGCATCTCTGACCTCTCGATGTATCCCACGCAGA TATCGCCTGGTCCATTCAAGACCCTTTAGCGATCCCTGGGTTTTACCAGA TGGTGTTGTACTTCGCGTGATATCCGCAACCGTGATATGTCTCAACGGGG TCTTAGGATGAAGCGAGCCACGTACTAACTACCCCGACATTTGTAGACAG GCTTTCCAAGGGTTTCCAAATTGATGTGGGGCTCGCTGCGCCTTCCTCGC CGAACCGCCGCCCGCCCGTAGGTTCCGATGCGTTGCTACGGGGACAAGCC TTCCTGGTTCCGACAGATTTCTCCCTCGGGAGCGATCCCCGTGGCACAGA TTGATGGACGCATTATCTCCGAATCAAACGTCATCATGCAGGTCAGCGAA GCTGAACAGCCGTTTTGCGGGGAGGGGCGGGGCAGGGGAGCGGGTCTAAC ATGTCGCGCGCTTCGTGATATGACGTCACGCTGTACGGTTTTCCTCGGGA TATGTTGTGTATGCTTCCCTTTCTTAATGTACCAGTGTATTCTGAGGAGT ACTGTTCTTCTTTTAGCATAATAAGAATCATCATCGTTCGCCCACGCGTC TTGACGCGAACCCTTCCTCGAAGGTGCTGGAGGCGACGTTTCCGGATAAC AACCCGCTGCTTCCGGCGGCGACCTCTCCCCTGGCGGTCCGCGTCGACCC TTTGTTACGACTAGAGCGCGAGATCTTTTCCGCCTGGTAAGGCGATCGAA CCTTTATTTTTGAAAGTGTCGGCGTGGTGTGAGCCTGGCGACCGCGTACA TCCGAAATAAAATGGGTATATGTACAAAAAGGGAAAACTTTGCCGCCGTT CCACATGCCACCGATCGAAGTTAATCGGTCTCTCTCTATCCGTATCCGTA TCATATTCTACCTGTACCGCATAGTGTCTCTATAGAGATAGATATCATGT GTTACAATTTATTTATTCGCCCGTATCTTTATGGCGTATCTGGTAGGCGT TTTGCCCCCCTCCTCCCACCCTTACTCTCCTTTATAACTAATACTGAGCC CTCGCCCTCTGGTGTCCCCTTTTCACCGGTGCTTTGCAACCACCTCCAGG TTCCGCTGGCTCACGAGCTCCGGGACAAATTCTGCGTCTTTCGTGGCGGC GGCGGACAAGGTCAACGAGGCTCTCGGAGAGGGTGGGGGTCCCTATTTTC TCGGTGAG
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Coding sequence (CDS) from alignment at H-elongata_contig70278:657..2764+

>mRNA_H-elongata_contig70278.14684.1 ID=mRNA_H-elongata_contig70278.14684.1|Name=mRNA_H-elongata_contig70278.14684.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1398bp|location=Sequence derived from alignment at H-elongata_contig70278:657..2764+ (Himanthalia elongata Himel1 dioecious)
AAGACTAGCCTGGCGGCTTCCTTTAACCCTTTTGACGGCCTGGGCAAGAG
CGTTGGAAACATGTTCTCCGGTGCCACAGGTTCCGTGCCCGATGACTTCG
AGGACAAGGCTCCTTCCTGGGAGAAGACTAGCCTGGCGGCTTCCTTTAAC
CCTTTTGACGGCCTGGGCAAGAGCGTTGGAAACATGTTCTCCGGTGCCAC
AGGTTCCGTGCCCGATGACTTCGAGGACAAGGCTCCTTCCTGGGAGAGCT
TGGAGACACTGCTACAAGAAAGGCAGACAAAGGAAGAGAAAGACGAGGGT
GTGCTTAGAGGACGAGGCTACGGGCCGACCAGTGCACTCGCCGGTCTCCG
CCTGTTCGACGCCCCGGAAGGAACCGAGCTTGGAGACACTGCTACAAGAA
AGGCAGACAAAGGAAGAGAAAGACGAGGGTGTGCTTAGAGGACGAGGCTA
CGGGCCGACCAGTGCACTCGCCGGTCTCCGCCTGTTCGACGCCCCGGAAG
GAACCGAACCTCGCGTGACGCTTTACCGAGACCACGCTGCCTGGTGCCCG
TACTGCGAGAAAGTTTGGCTGCAGTTGGAGGAGAAACGGATACCCTACAA
GGTGGAGAAGAACCTCGCGTGACGCTTTACCGAGACCACGCTGCCTGGTG
CCCGTACTGCGAGAAAGTTTGGCTGCAGTTGGAGGAGAAACGGATACCCT
ACAAGGTGGAGAAGGTTCCGATGCGTTGCTACGGGGACAAGCCTTCCTGG
TTCCGACAGATTTCTCCCTCGGGAGCGATCCCCGTGGCACAGATTGATGG
ACGCATTATCTCCGAATCAAACGTCATCATGCAGGTTCCGATGCGTTGCT
ACGGGGACAAGCCTTCCTGGTTCCGACAGATTTCTCCCTCGGGAGCGATC
CCCGTGGCACAGATTGATGGACGCATTATCTCCGAATCAAACGTCATCAT
GCAGGTGCTGGAGGCGACGTTTCCGGATAACAACCCGCTGCTTCCGGCGG
CGACCTCTCCCCTGGCGGTCCGCGTCGACCCTTTGTTACGACTAGAGCGC
GAGATCTTTTCCGCCTGGTGCTGGAGGCGACGTTTCCGGATAACAACCCG
CTGCTTCCGGCGGCGACCTCTCCCCTGGCGGTCCGCGTCGACCCTTTGTT
ACGACTAGAGCGCGAGATCTTTTCCGCCTGGTTCCGCTGGCTCACGAGCT
CCGGGACAAATTCTGCGTCTTTCGTGGCGGCGGCGGACAAGGTCAACGAG
GCTCTCGGAGAGGGTGGGGGTCCCTATTTTCTCGGTGAGGTTCCGCTGGC
TCACGAGCTCCGGGACAAATTCTGCGTCTTTCGTGGCGGCGGCGGACAAG
GTCAACGAGGCTCTCGGAGAGGGTGGGGGTCCCTATTTTCTCGGTGAG
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