mRNA_H-elongata_contig70220.14682.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: D8LB01_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB01_ECTSI) HSP 1 Score: 386 bits (992), Expect = 1.300e-132 Identity = 187/206 (90.78%), Postives = 198/206 (96.12%), Query Frame = 1
Query: 22 QFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFIHVSTDEVYGEGEHDQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLMR 639
+FVKGNICSSD++ Y+LREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRF+HVSTDEVYGEGEHDQEPMFED+VLEPTNPYAATKAGAEFIAKAYFRSFNLPV+ITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTG N RNFL+V DVATAFEKILH VEG IYNIGG+NE SVL+VA+DLMR
Sbjct: 77 KFVKGNICSSDMVTYVLREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFVHVSTDEVYGEGEHDQEPMFEDNVLEPTNPYAATKAGAEFIAKAYFRSFNLPVIITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGSNKRNFLHVADVATAFEKILHAGVEGSIYNIGGTNEHSVLKVARDLMR 282
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: A0A6H5KQM4_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM4_9PHAE) HSP 1 Score: 384 bits (987), Expect = 4.830e-132 Identity = 186/206 (90.29%), Postives = 197/206 (95.63%), Query Frame = 1
Query: 22 QFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFIHVSTDEVYGEGEHDQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLMR 639
+FVKGNICSSD++ Y+LREE IDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRF+HVSTDEVYGEGEHDQEPMFED+VLEPTNPYAATKAGAEFIAKAYFRSFNLPV+ITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTG N RNFL+V DVATAFEKILH VEG IYNIGG+NE SVL+VA+DLMR
Sbjct: 77 KFVKGNICSSDMVTYVLREENIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFVHVSTDEVYGEGEHDQEPMFEDNVLEPTNPYAATKAGAEFIAKAYFRSFNLPVIITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGSNKRNFLHVADVATAFEKILHAGVEGSIYNIGGTNEHSVLKVARDLMR 282
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: A0A836C9V8_9STRA (Dtdp-glucose 4,6-dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9V8_9STRA) HSP 1 Score: 350 bits (899), Expect = 4.060e-118 Identity = 166/206 (80.58%), Postives = 189/206 (91.75%), Query Frame = 1
Query: 22 QFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVG-IKRFIHVSTDEVYGEGEHDQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLM 636
+FVKGNICSSD++ Y+LREEK+DTI+HFAAQTHVDNSFGNSF FT NNI GTHVLLESAK +G ++RFIHVSTDEVYGEGEH++EPMFEDHVLEPTNPYAATKAGAEFIAKAY+RSF LP++ITRGNNVYGPHQYPEK+IPKFINQL+RG+ LT+HG G NTRNFLYV+DVA AF+ ILH+ G IYNIGGSNE SVL+VAKDL+
Sbjct: 83 KFVKGNICSSDMVTYVLREEKVDTIIHFAAQTHVDNSFGNSFTFTHNNIMGTHVLLESAKTLGTVRRFIHVSTDEVYGEGEHNEEPMFEDHVLEPTNPYAATKAGAEFIAKAYYRSFKLPIIITRGNNVYGPHQYPEKMIPKFINQLLRGRPLTVHGDGRNTRNFLYVQDVARAFDVILHKGEVGRIYNIGGSNEHSVLKVAKDLL 288
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: W7TPP3_9STRA (Rhamnose biosynthetic enzyme expressed n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPP3_9STRA) HSP 1 Score: 335 bits (860), Expect = 2.930e-112 Identity = 163/206 (79.13%), Postives = 182/206 (88.35%), Query Frame = 1
Query: 22 QFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFIHVSTDEVYGEGEHDQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLMR 639
+FVKGNICSSDL+ Y+L EE+IDTI+HFAAQTHVDNSFGNSF FTQNNI GTHVLLESAK IKRFIHVSTDEVYGEG DQEPMFED VLEPTNPYAATKAGAEFIAK+Y RSFNLP++ITRGNNVYGPHQYPEKLIPKF+N LMR + +T+HG G NTRNFLYV+DVA AFE ILH V G IYNIGG++E + ++VAKDL+R
Sbjct: 117 KFVKGNICSSDLVNYVLEEEEIDTIMHFAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHNIKRFIHVSTDEVYGEGAADQEPMFEDQVLEPTNPYAATKAGAEFIAKSYSRSFNLPLIITRGNNVYGPHQYPEKLIPKFVNLLMRDRPVTLHGNGLNTRNFLYVEDVARAFEVILHRGVTGKIYNIGGTHEKANIEVAKDLIR 322
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: A0A7S2CKW6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKW6_9STRA) HSP 1 Score: 331 bits (848), Expect = 6.880e-111 Identity = 158/205 (77.07%), Postives = 183/205 (89.27%), Query Frame = 1
Query: 22 QFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFIHVSTDEVYGEGEHDQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLM 636
+FVKGNICS+D++ Y+L EEKIDTI+HFAAQTHVDNSFGNSFQFTQNNI+GTHVLLESAK GIKRFIHVSTDEVYGEG ++PM E+HVLEPTNPYAATKAGAEF+ K+Y RSF+LPV+ITRGNNVYGPHQYPEK+IPKFINQL RG+ +T+HGTG+NTRNFLYV+DVA AFE IL + G IYNIGG+NE+S + VAK L+
Sbjct: 68 KFVKGNICSADMVNYVLTEEKIDTIIHFAAQTHVDNSFGNSFQFTQNNIFGTHVLLESAKIHGIKRFIHVSTDEVYGEGGETEDPMKEEHVLEPTNPYAATKAGAEFLVKSYHRSFDLPVIITRGNNVYGPHQYPEKIIPKFINQLQRGRAVTLHGTGQNTRNFLYVEDVARAFEVILFKGQVGQIYNIGGTNEISNVDVAKMLI 272
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: A0A4D9D847_9STRA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D847_9STRA) HSP 1 Score: 328 bits (841), Expect = 4.170e-109 Identity = 157/206 (76.21%), Postives = 183/206 (88.83%), Query Frame = 1
Query: 22 QFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFIHVSTDEVYGEGEHDQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLMR 639
+FVKGNICSSDL+ ++L EE+IDTI+H AAQTHVDNSFGNSF FTQNNI GTHVLLESAK GI+RF+HVSTDEVYGEG QEPMFED+VLEPTNPYAATKAGAEF+AK+Y RSFNLPV+ITRGNNVYGPHQYPEKLIPKFIN L+RG++LT+HG G NTRNFLYV DVA A++ +LH G IYNIGG++E++ L+VAKD++R
Sbjct: 74 KFVKGNICSSDLVNFVLEEEEIDTIVHLAAQTHVDNSFGNSFSFTQNNILGTHVLLESAKVHGIRRFVHVSTDEVYGEGAAGQEPMFEDNVLEPTNPYAATKAGAEFLAKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFINLLLRGRQLTLHGNGLNTRNFLYVTDVARAYDVVLHFGETGKIYNIGGTHEMANLEVAKDVIR 279
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: A0A7S2RRE1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRE1_9STRA) HSP 1 Score: 323 bits (828), Expect = 1.880e-107 Identity = 156/204 (76.47%), Postives = 175/204 (85.78%), Query Frame = 1
Query: 25 FVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFIHVSTDEVYGEGEHDQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLM 636
FVKGNICS DL+ Y+L IDTI+HFAAQ+HVDNSFGNSFQFTQNNIYGTHVLLESAK GI+RFIHVSTDEVYGEG Q+PM E+ VLEPTNPYAATKA AEFI K+Y RSFNLPV+ITRGNNVYGPHQYPEKLIPKF NQL+RG+ +T+HG G+NTRNFL+V DVA AFE IL + G IYNIGGSNE+S L+VAK L+
Sbjct: 100 FVKGNICSPDLVNYVLEAHSIDTIMHFAAQSHVDNSFGNSFQFTQNNIYGTHVLLESAKIYGIERFIHVSTDEVYGEGSDGQDPMTEEQVLEPTNPYAATKAAAEFIVKSYHRSFNLPVIITRGNNVYGPHQYPEKLIPKFTNQLLRGRAVTLHGDGQNTRNFLFVTDVARAFEAILFKGAIGQIYNIGGSNEISNLEVAKSLI 303
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: F0Y3X2_AURAN (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3X2_AURAN) HSP 1 Score: 320 bits (820), Expect = 4.010e-107 Identity = 153/207 (73.91%), Postives = 181/207 (87.44%), Query Frame = 1
Query: 22 QFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFIHVSTDEVYGEGEH-DQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLMR 639
+FVKG+ICS+DL+ ++L E++DTI+HFAAQTHVDNSFGNSFQFT+NNI GTHVLLE+AK IKRF+HVSTDEVYGEGE+ + EPM EDHVLEPTNPYAATKA AEF+ K+Y RSF LP++ITRGNNVYGPHQ+PEKLIPKF+NQL RG+ +T+HGTG NTRNFLYV+DVA AF+ ILH+A G IYNIGG NE S L VAK+L+R
Sbjct: 50 KFVKGDICSADLVNFVLETEEVDTIMHFAAQTHVDNSFGNSFQFTRNNIMGTHVLLEAAKVHSIKRFVHVSTDEVYGEGENMETEPMIEDHVLEPTNPYAATKAAAEFLVKSYHRSFQLPIIITRGNNVYGPHQFPEKLIPKFVNQLARGRPVTLHGTGANTRNFLYVEDVARAFDCILHKAAVGKIYNIGGCNERSNLSVAKELIR 256
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: A0A6V2K0F2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2K0F2_9STRA) HSP 1 Score: 318 bits (815), Expect = 4.580e-106 Identity = 157/208 (75.48%), Postives = 176/208 (84.62%), Query Frame = 1
Query: 22 QFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVG-IKRFIHVSTDEVYGEGEH-DQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLMR 639
+FVKG+ICS DL+ Y+L+EE IDTI+HFAAQTHVDNSFGNSF FT NIYGTHVLLESA + IKRFIHVSTDEVYGEGE + +PM E+HVLEPTNPYAATKAGAEF+ K+Y RSF LPV++TRGNNVYGPHQYPEKLIPKF NQL+R LT+HG G NTRNFLYV DVA AFE ILH+ GHIYNIGG NE+ LQVAKDL+R
Sbjct: 68 KFVKGDICSPDLVSYVLKEENIDTIMHFAAQTHVDNSFGNSFNFTHANIYGTHVLLESANRCPTIKRFIHVSTDEVYGEGEDFETDPMQEEHVLEPTNPYAATKAGAEFLVKSYHRSFKLPVILTRGNNVYGPHQYPEKLIPKFTNQLLRDMPLTLHGDGSNTRNFLYVTDVANAFEVILHKGQVGHIYNIGGKNELPNLQVAKDLIR 275
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Match: A0A6T5LL28_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5LL28_HETAK) HSP 1 Score: 318 bits (815), Expect = 6.120e-106 Identity = 153/205 (74.63%), Postives = 175/205 (85.37%), Query Frame = 1
Query: 22 QFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQFTQNNIYGTHVLLESAKKVGIKRFIHVSTDEVYGEGEHDQEPMFEDHVLEPTNPYAATKAGAEFIAKAYFRSFNLPVVITRGNNVYGPHQYPEKLIPKFINQLMRGKKLTIHGTGENTRNFLYVKDVATAFEKILHEAVEGHIYNIGGSNEVSVLQVAKDLM 636
+FVKG+ICS DL+ +IL EKIDTI+HFAAQTHVDNSFGNSF F++NNIYGTHVLLESAK+ IKRF+H STDEVYGEGE D PM E+HVLEPTNPYAATKA AEF+ K+Y RSFNLPV+ITRGNNVYGPHQYPEKLIPKFINQL G+ LT+HG GEN RNFLYV+DVA AFE +L A G +YNIGGSNE++V+QV L+
Sbjct: 75 KFVKGDICSPDLVNHILATEKIDTIVHFAAQTHVDNSFGNSFAFSRNNIYGTHVLLESAKQANIKRFVHCSTDEVYGEGEIDGAPMGEEHVLEPTNPYAATKAAAEFLVKSYNRSFNLPVIITRGNNVYGPHQYPEKLIPKFINQLRTGRSLTVHGNGENMRNFLYVEDVARAFETVLRRAEVGKVYNIGGSNELTVMQVTDRLL 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70220.14682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70220.14682.1 >prot_H-elongata_contig70220.14682.1 ID=prot_H-elongata_contig70220.14682.1|Name=mRNA_H-elongata_contig70220.14682.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=214bp PSRSDRRQFVKGNICSSDLMLYILREEKIDTILHFAAQTHVDNSFGNSFQback to top mRNA from alignment at H-elongata_contig70220:219..2729+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70220.14682.1 ID=mRNA_H-elongata_contig70220.14682.1|Name=mRNA_H-elongata_contig70220.14682.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2511bp|location=Sequence derived from alignment at H-elongata_contig70220:219..2729+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70220:219..2729+ >mRNA_H-elongata_contig70220.14682.1 ID=mRNA_H-elongata_contig70220.14682.1|Name=mRNA_H-elongata_contig70220.14682.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1284bp|location=Sequence derived from alignment at H-elongata_contig70220:219..2729+ (Himanthalia elongata Himel1 dioecious)back to top |