mRNA_H-elongata_contig70167.14677.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: A0A6H5JQ37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQ37_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 3.370e-20 Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 10 IDLSLDRRRGRCIFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMDIVVVTLGE 222
+ +S+ G CI+YGM TGI+ L +QAFGA+NNRLVGV FARGTLLTAF+F+PV LW+YM+ +++ G+
Sbjct: 83 LGVSVSNITGVCIYYGMGTGIELLCAQAFGAKNNRLVGVAFARGTLLTAFLFIPVAFLWFYMENIMLAFGQ 153
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: A0A368R9E7_SETIT (Protein DETOXIFICATION n=3 Tax=Setaria TaxID=4554 RepID=A0A368R9E7_SETIT) HSP 1 Score: 57.0 bits (136), Expect = 9.870e-8 Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 SALIDLSLDRRRGRCIFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMDIVVVTLGE 222
SA I SL G + YGMA+ ++TL QA+GA+ R VG R + F+ +P+++LW +MD ++V +G+
Sbjct: 85 SAAIATSLANVSGFSLLYGMASALETLCGQAYGAKQYRKVGADTYRAVVTLLFVCIPLSLLWVFMDKILVLIGQ 158
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: A0A7S3JA02_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Euplotes harpa TaxID=151035 RepID=A0A7S3JA02_9SPIT) HSP 1 Score: 52.4 bits (124), Expect = 8.900e-7 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 46 IFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMDIVVVTLGE 222
I G+A G+DTLASQAFG +NN L G+ F R +++ IF+P + Y+ + ++ LG+
Sbjct: 15 ISIGLAAGMDTLASQAFGNRNNYLAGLYFHRAMIISTLIFLPQLVTLYFAEDILQFLGQ 73
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: A0A8J5UXU1_9ASCO (Uncharacterized protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5UXU1_9ASCO) HSP 1 Score: 53.1 bits (126), Expect = 2.250e-6 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 37 GRCIFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMDIVVVTL 216
G F GMAT +DT SQAFG+ N +VGV F R +L+ I +P+ I+W+ + ++V L
Sbjct: 87 GLATFRGMATSLDTFCSQAFGSGNKTMVGVYFQRCSLMILTITIPLIIIWFNSEAILVKL 146
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: W0TFM4_KLUMD (Uncharacterized transporter C4B3.13 n=1 Tax=Kluyveromyces marxianus (strain DMKU3-1042 / BCC 29191 / NBRC 104275) TaxID=1003335 RepID=W0TFM4_KLUMD) HSP 1 Score: 53.1 bits (126), Expect = 2.250e-6 Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 1
Query: 46 IFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMDIV 204
IF G+AT +DT+ QAFGA N +VG+ F RG ++ +P+T WY D+V
Sbjct: 97 IFIGIATCLDTVCPQAFGAGNYEMVGLYFQRGVAISLVCSIPITAFWYKSDVV 149
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: UPI001F5D5B0B (protein DETOXIFICATION 16-like n=3 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D5B0B) HSP 1 Score: 52.8 bits (125), Expect = 3.080e-6 Identity = 23/62 (37.10%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 37 GRCIFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMDIVVVTLGE 222
G + GMAT +DTL QA+GA+ L+G+ R L+ + +PV +LW+Y V++ +G+
Sbjct: 82 GFSLMQGMATALDTLCGQAYGARQYHLLGIYKQRAMLILTLVSIPVAVLWFYTGSVLLLVGQ 143
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: A0A5J9TZQ5_9POAL (Protein DETOXIFICATION n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9TZQ5_9POAL) HSP 1 Score: 52.8 bits (125), Expect = 3.090e-6 Identity = 29/72 (40.28%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 1 SALIDLSLDRRRGRCIFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMDIVVVTL 216
SA + S G + GMA+ +DTL QAFGA+ + L+GV R ++ A + VPV I+W Y D ++V L
Sbjct: 62 SASLATSFAGVTGFSLLTGMASSLDTLCGQAFGAEQHHLLGVYKQRAMVVLALVSVPVAIVWAYTDKILVVL 133
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: A0A1E5W0C4_9POAL (Protein DETOXIFICATION n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5W0C4_9POAL) HSP 1 Score: 52.8 bits (125), Expect = 3.160e-6 Identity = 24/74 (32.43%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 1 SALIDLSLDRRRGRCIFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMDIVVVTLGE 222
S I S+ G + +GMA+ ++T+ QA+GA+ R +GV R + F+ +P+++LW +MD ++V +G+
Sbjct: 30 STAIATSIANVSGFSLLFGMASALETMCGQAYGAKQYRQLGVDTYRAVVTLLFVCIPLSLLWVFMDKILVLIGQ 103
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: A0A642UXZ3_DIURU (Uncharacterized protein n=1 Tax=Diutina rugosa TaxID=5481 RepID=A0A642UXZ3_DIURU) HSP 1 Score: 52.4 bits (124), Expect = 4.250e-6 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 1
Query: 46 IFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMDIV 204
IF GMAT +DTL QA+GA LV + R T+L IFVPV + W+Y D V
Sbjct: 204 IFEGMATALDTLCPQAYGAGQYELVSLRVQRSTVLGWCIFVPVAVFWWYSDYV 256
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Match: A0A5E8B4M2_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8B4M2_9ASCO) HSP 1 Score: 52.4 bits (124), Expect = 4.260e-6 Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 1
Query: 37 GRCIFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLTAFIFVPVTILWYYMD 198
G + G+AT +DTL +QA+GA+N LVG F + TL+ F PV+ILW Y +
Sbjct: 218 GFAMIQGLATCLDTLCAQAYGAENYSLVGEYFQKCTLMVMACFAPVSILWLYAE 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70167.14677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70167.14677.1 >prot_H-elongata_contig70167.14677.1 ID=prot_H-elongata_contig70167.14677.1|Name=mRNA_H-elongata_contig70167.14677.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp SALIDLSLDRRRGRCIFYGMATGIDTLASQAFGAQNNRLVGVVFARGTLLback to top mRNA from alignment at H-elongata_contig70167:2977..3198+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70167.14677.1 ID=mRNA_H-elongata_contig70167.14677.1|Name=mRNA_H-elongata_contig70167.14677.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=222bp|location=Sequence derived from alignment at H-elongata_contig70167:2977..3198+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70167:2977..3198+ >mRNA_H-elongata_contig70167.14677.1 ID=mRNA_H-elongata_contig70167.14677.1|Name=mRNA_H-elongata_contig70167.14677.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=444bp|location=Sequence derived from alignment at H-elongata_contig70167:2977..3198+ (Himanthalia elongata Himel1 dioecious)back to top |