prot_H-elongata_contig70126.14669.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70126.14669.1
Unique Nameprot_H-elongata_contig70126.14669.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
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BLAST of mRNA_H-elongata_contig70126.14669.1 vs. uniprot
Match: A0A6H5JJC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC9_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 6.840e-15
Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 0 
Query:   34 GRVLSSFGQTETSAWLHRAAALQRYLMYDVPMDQQTLTATHNSFSSDSDNSTHSNFE 90
            GRV   +GQTETS WLHRAAALQRY+ YD+P+   TLTATHNSFS D + STH+NFE
Sbjct:   48 GRV---YGQTETSDWLHRAAALQRYIGYDIPLSSITLTATHNSFSHDRNISTHANFE 101
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70126.14669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJC9_9PHAE6.840e-1570.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70126contigH-elongata_contig70126:1718..2735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70126.14669.1mRNA_H-elongata_contig70126.14669.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70126 1718..2758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70126.14669.1 ID=prot_H-elongata_contig70126.14669.1|Name=mRNA_H-elongata_contig70126.14669.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
MKKYARNVAAGRMGVRSVDILRRPVEILALMLFGRVLSSFGQTETSAWLH
RAAALQRYLMYDVPMDQQTLTATHNSFSSDSDNSTHSNFE
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