prot_H-elongata_contig7012.14668.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7012.14668.1
Unique Nameprot_H-elongata_contig7012.14668.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length274
Homology
BLAST of mRNA_H-elongata_contig7012.14668.1 vs. uniprot
Match: A0A6H5KKZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ7_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 2.500e-101
Identity = 166/268 (61.94%), Postives = 196/268 (73.13%), Query Frame = 0
Query:    1 MVRLEEKLGASSETLRVIHSEMERDYYNAETKLVDPLLARVVRALKIQGHLVFGLTSNALDRVHTPQILETLARYKIRFSSTEVKGELPRSGALVMDHPVCRGVIFTDNQQSVRHNKGEVIAEFVGLLLHN-----------------ASQALSADDGAPISEGNLQRGMVNGDAISSKRLLRKCVLVDNTSEKCEKAASSFERDPA-AAGTLELHTLHFTEAENLIDSPDAMMQLGRILRRLQAQGLIGVDLVTDDMLVSPAGAVRR 250
            M RLE KLG SSETLRVI  EMERDYYNA+ +LVDPLLARV+R+LKIQGH VFGLTSNALD VH P+ILETLA+YKIRFS+ +V+GELPRSGAL++DHPV RG+IF DNQQ+V H+KGE+IAE+VGLLL                   A   LS   G  + +G    G        S R  RKCVLVDNTS+KCE+A  +F R  A A G LELHTLHFTEAEN++DSP+A+ QL  IL RLQ +GLIGVDL+ +D+LV+P G VRR
Sbjct:  107 MARLEAKLGPSSETLRVIRQEMERDYYNADLRLVDPLLARVIRSLKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLXXXXXXXXXXVGEKTAGDAARGGLSEPGGVKVGDGESSGGRTALAGSLSPRRPRKCVLVDNTSKKCERAVETFARHAAMAGGGLELHTLHFTEAENMVDSPEALRQLRVILARLQERGLIGVDLIAEDILVTPVGGVRR 374          
BLAST of mRNA_H-elongata_contig7012.14668.1 vs. uniprot
Match: D8LQ97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ97_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 1.150e-97
Identity = 159/248 (64.11%), Postives = 193/248 (77.82%), Query Frame = 0
Query:   22 MERDYYNAETKLVDPLLARVVRALKIQGHLVFGLTSNALDRVHTPQILETLARYKIRFSSTEVKGELPRSGALVMDHPVCRGVIFTDNQQSVRHNKGEVIAEFVGLLLHNASQALSADDGAPISEGNLQRGMVN-------GDAISS-----------KRLLRKCVLVDNTSEKCEKAASSFERDPAAAGT-LELHTLHFTEAENLIDSPDAMMQLGRILRRLQAQGLIGVDLVTDDMLVSPAGAVRR 250
            MERDYYNA+ KLVDPLLARV+RALKIQGH VFGLTSNALD VH P+ILETLA+YKIRFS+ +V+GELPRSGAL++DHPV RG+IF DNQQ+V H+KGE+IAE+VGLLLHNA +A+S   GA  + G+  RG ++       GD  SS            +  RKCVLVDNTS+KCE+AA +F R  AAAG  LELHTLHFTEAEN++DSP+A+ QL  IL RL+ +GLIGVDL+ +D+LV+P G VRR
Sbjct:    1 MERDYYNADPKLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTA-GDAARGGLSEPGGVKVGDGESSGGRTALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGVRR 247          
BLAST of mRNA_H-elongata_contig7012.14668.1 vs. uniprot
Match: A0A835YVM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM2_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 9.570e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 0
Query:   11 SSETLRVIHSEMERDYYNAETKLVDPLLARVVRALKIQGHLVFGLTSNALDRVHTPQILETLARYKIRFSSTEVKGELP 89
            +SE +R I +EMER+YY+++ KLVDPLLAR+VR LK+QGH VFGLTSN     H+   +  LA+YKIRFS   ++GELP
Sbjct:   99 ASEVVRKIQAEMEREYYDSDIKLVDPLLARLVRGLKVQGHHVFGLTSNEPFSEHSITTVAALAQYKIRFSDPWIRGELP 177          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7012.14668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KKZ7_9PHAE2.500e-10161.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ97_ECTSI1.150e-9764.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVM2_9STRA9.570e-2058.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7012contigH-elongata_contig7012:682..2091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7012.14668.1mRNA_H-elongata_contig7012.14668.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7012 41..5454 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7012.14668.1 ID=prot_H-elongata_contig7012.14668.1|Name=mRNA_H-elongata_contig7012.14668.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=274bp
MVRLEEKLGASSETLRVIHSEMERDYYNAETKLVDPLLARVVRALKIQGH
LVFGLTSNALDRVHTPQILETLARYKIRFSSTEVKGELPRSGALVMDHPV
CRGVIFTDNQQSVRHNKGEVIAEFVGLLLHNASQALSADDGAPISEGNLQ
RGMVNGDAISSKRLLRKCVLVDNTSEKCEKAASSFERDPAAAGTLELHTL
HFTEAENLIDSPDAMMQLGRILRRLQAQGLIGVDLVTDDMLVSPAGAVRR
HEECGSSQPKPAESSQRHEDPTN*
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