mRNA_H-elongata_contig70047.14662.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: D7FXC2_ECTSI (Peptidylprolyl isomerase domain and WD repeat containing 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC2_ECTSI) HSP 1 Score: 367 bits (943), Expect = 1.780e-122 Identity = 175/209 (83.73%), Postives = 188/209 (89.95%), Query Frame = 1
Query: 28 QAYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAPTRAAWIHGRGRQGRVAVADADSPEIHVYLSDGSADAVGRFAGHGSPVVSLGFNEQANTVVSGDRNGVLEYWGAEEYGRPPPGAVSFKFKMDTDLYDLAKA 654
+ YLEALP+APMYERSYMHRDVV++ +TPCGTDFLVTAS DGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVS+DGQRLCTTSADKSIKFYDVVSFDMSHMIAL Y PTRA WIH RGR+GRVAVADADSP I VY+SDGS DAVG+F GH SPV+SL FNE A TVVS DR+GVLEYW AE+ GRPP GAV FKFKMDTDLYD+AKA
Sbjct: 72 KVYLEALPAAPMYERSYMHRDVVSHALMTPCGTDFLVTASLDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSRDGQRLCTTSADKSIKFYDVVSFDMSHMIALGYTPTRATWIHERGRKGRVAVADADSPAIRVYVSDGSTDAVGQFDGHSSPVLSLAFNEPAKTVVSADRSGVLEYWSAEDCGRPPAGAVKFKFKMDTDLYDMAKA 280
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: A0A5D6YCT6_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCT6_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.010e-67 Identity = 118/211 (55.92%), Postives = 146/211 (69.19%), Query Frame = 1
Query: 31 AYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAPTRAAWIHGRGRQG--RVAVADADSPEIHVYLSD--GSADAVGRFAGHGSPVVSLGFNEQANTVVSGDRNGVLEYWGAEEYGRPPPGAVSFKFKMDTDLYDLAK 651
AY+ LPSA MYERSYMHRDVVT+V + P T F+VTAS DGH+KFWKKM GV FVKHY +H+ +H LAVS+DG RLC+T+AD SIKFYDV+ FD+ +M+++ +AP WI RG RV VADAD+P + V+ ++ G+ H +PV LGFN AN V+SGD G L YW AE Y P AV+FKFK DTDLY+LAK
Sbjct: 59 AYVANLPSAAMYERSYMHRDVVTHVVVAP-ETQFVVTASRDGHVKFWKKMSRGVAFVKHYKAHVGAVHGLAVSRDGLRLCSTAADASIKFYDVLGFDLVNMLSVAFAPGACCWISRRGAAAVPRVVVADADAPLLRVFSAEQAGAQPLHTLERAHTAPVTVLGFNAVANCVISGDARGHLAYWHAESYAPPGADAVAFKFKSDTDLYELAK 268
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: A0A3L6VLW7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VLW7_9STRA) HSP 1 Score: 216 bits (550), Expect = 4.400e-66 Identity = 113/214 (52.80%), Postives = 146/214 (68.22%), Query Frame = 1
Query: 28 QAYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAPTRAAWIHGRGRQ-GRVAVADADSPEIHVYLSDGSADA-----VGRFAGHGSPVVSLGFNEQANTVVSGDRNGVLEYWGAEEYGRPPPGAVSFKFKMDTDLYDLAK 651
+A L+ LP A MYE+SYMHRD VT+VA + T FL+TAS+DGHIKFW+KM G+EFVKHY +HL+ I LAVS DG RL TTS D +IKF+D++ FDM +M+ L Y P++ WI+ G ++AVA+ DS + VY ++ + DA V + H +PV LGFN AN V+SGD G+LEYW A+ Y P AV FK KMDTDLY+L K
Sbjct: 27 KALLDQLPCAEMYEKSYMHRDSVTHVAFSK-STQFLITASADGHIKFWRKMRTGIEFVKHYKAHLQAIVGLAVSDDGLRLATTSLDGTIKFFDILGFDMVNMLTLGYTPSQCCWIYQAGHVVPKIAVAEKDSHVLRVYHAEKAKDAALLHVVDKL--HSAPVSLLGFNAVANVVISGDTKGMLEYWSADTYSFPESPAVKFKSKMDTDLYELLK 237
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: A0A4D9CR11_9STRA (PPIase cyclophilin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR11_9STRA) HSP 1 Score: 222 bits (566), Expect = 2.690e-65 Identity = 112/216 (51.85%), Postives = 148/216 (68.52%), Query Frame = 1
Query: 28 QAYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAPTRAAWIHGRGR-QGRVAVADADSPEIHVYLSDGSADAVGRFAG-HGSPVVSLGFNEQANTVVSGDRNGVLEYWGAEEYGRP------PPGAVSFKFKMDTDLYDLAK 651
+A+L ALP+A MYE+SYMHRD VT A TP TDFL+TAS DGH+KFWKKMPEG+EFVKHYH+HL I LAVS DG RL TT ADK+IKFYDV++FD+++M+ + ++P+ A W+H G GR+AVADAD+P + +Y SDGS + H +PV +L F+ +S D G+LEYW E G P V F+ K+D+DL+++ K
Sbjct: 71 EAFLAALPNADMYEKSYMHRDTVTQCAFTP-RTDFLITASEDGHVKFWKKMPEGLEFVKHYHAHLGSIRGLAVSGDGLRLATTGADKAIKFYDVLTFDLTYMLDVDFSPSHAVWVHRPGEAHGRLAVADADTPCLRIYRSDGSQAPIHTLPTMHAAPVTALAFSPSDALAISADVKGMLEYWSTELEGGDGEAYTFPRKKVFFRSKLDSDLFEMLK 285
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: A0A6H5L5N8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N8_9PHAE) HSP 1 Score: 209 bits (531), Expect = 3.830e-65 Identity = 98/109 (89.91%), Postives = 104/109 (95.41%), Query Frame = 1
Query: 28 QAYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAP 354
+ YLEALP+APMYERSYMHRDVV++V +TPCGTDFLVTAS DGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVS+DGQRLCTTSADKSIKFYDVVSFDMSHMIAL Y P
Sbjct: 91 KVYLEALPAAPMYERSYMHRDVVSHVLMTPCGTDFLVTASLDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSRDGQRLCTTSADKSIKFYDVVSFDMSHMIALGYTP 199
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: G4ZVH8_PHYSP (PPIase cyclophilin-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=G4ZVH8_PHYSP) HSP 1 Score: 218 bits (554), Expect = 5.830e-64 Identity = 107/211 (50.71%), Postives = 148/211 (70.14%), Query Frame = 1
Query: 31 AYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAPTRAAWIHGRGR-QGRVAVADADSPEIHVYLSDGSADAVGRFAG--HGSPVVSLGFNEQANTVVSGDRNGVLEYWGAEEYGRPPPGAVS-FKFKMDTDLYDLAK 651
AYL LPSA MYERS+MHR V++V + P T F++TAS DGH+KFWKKM +G+EFVKHY +HL+ +H LAVS DG RLC+TSAD+SIKFYDV++FDM +M+++ + P WI +G + +V VAD +SP + +Y ++ +A H +PV L FN AN V+S D+ G++EYW A+ Y P +++ FKFK +TDLY+LAK
Sbjct: 22 AYLRNLPSAAMYERSFMHRAAVSHVLVAP-ETQFVITASVDGHVKFWKKMAKGIEFVKHYKAHLKEVHGLAVSADGLRLCSTSADRSIKFYDVLAFDMVNMLSVAFTPAECGWISAKGAIEPKVVVADKNSPALRIYTAESAASEPVHTISQLHAAPVTVLAFNPVANCVISADQKGIIEYWDADTYKFPKDKSLAKFKFKGETDLYELAK 231
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: H3G5V5_PHYRM (PPIase cyclophilin-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5V5_PHYRM) HSP 1 Score: 217 bits (553), Expect = 7.870e-64 Identity = 106/211 (50.24%), Postives = 155/211 (73.46%), Query Frame = 1
Query: 31 AYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAPTRAAWIHGRGR-QGRVAVADADSPEIHVYLSDGSA-DAVGRFAG-HGSPVVSLGFNEQANTVVSGDRNGVLEYWGAEEYGRPPPGAVS-FKFKMDTDLYDLAK 651
AYL+ LP A MYERS+MHR VV++V + P T F++TAS DGHIKFWKKM +G+EFVKHY +HL+ +H LAVS DG RLC+TSAD+SIKFYDV++FDM +M+++ + P +W+ +G + +V VAD +S + +Y ++ +A + + +G H +PV++L FN AN V+S D+ G++EYW A+ Y P +V+ F+FK +TDL++LAK
Sbjct: 22 AYLDNLPGAAMYERSFMHRAVVSHVLVAP-ETQFVITASVDGHIKFWKKMAKGIEFVKHYKAHLKEVHGLAVSADGLRLCSTSADRSIKFYDVLAFDMVNMLSVAFTPGECSWVSAKGAIEPKVVVADRNSAALRIYTAESAANEPIHTISGLHAAPVMALAFNPVANCVISADQKGIIEYWDADTYKFPKDKSVAKFRFKGETDLFELAK 231
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: W2Q5U2_PHYPN (PPIase cyclophilin-type domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2Q5U2_PHYPN) HSP 1 Score: 216 bits (550), Expect = 3.180e-63 Identity = 105/213 (49.30%), Postives = 148/213 (69.48%), Query Frame = 1
Query: 34 YLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAPTRAAWIHGRGR-QGRVAVADADSPEIHVYLSDGSAD----AVGRFAGHGSPVVSLGFNEQANTVVSGDRNGVLEYWGAEEYGRPPP--GAVSFKFKMDTDLYDLAK 651
YL+ LPSA MYERS+MHR V++V + P T F++TAS DGH+KFWKKM +G+EFVKHY +HL+ +H LAVS DG RLC+TSAD+SIKFYDV++FDM +M+++ Y P WI +G +V VAD +S + +Y ++ +A + + H +PV ++ +N AN V+S D+ G++EYW A+ Y P G V FKFK +TDL++LAK
Sbjct: 42 YLKNLPSAAMYERSFMHRATVSHVLVAP-ETQFIITASEDGHVKFWKKMAKGIEFVKHYKAHLKEVHGLAVSADGLRLCSTSADRSIKFYDVLAFDMVNMLSVAYTPAECCWISAKGAIDPKVVVADENSSALRIYTAESAASEPVYTISKL--HAAPVTAVAYNPVANCVISADQKGIIEYWDADTYKLPTKAKGVVKFKFKGETDLFELAK 251
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: A0A2P4Y9K0_9STRA (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y9K0_9STRA) HSP 1 Score: 213 bits (542), Expect = 5.210e-63 Identity = 107/213 (50.23%), Postives = 146/213 (68.54%), Query Frame = 1
Query: 31 AYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAPTRAAWIHGRGR-QGRVAVADADSPEIHVYLSDGSADAVGRFAG--HGSPVVSLGFNEQANTVVSGDRNGVLEYWGAEEYGRPPP--GAVSFKFKMDTDLYDLAKA 654
AYL+ LPSA MYERS+MHR V++V + P T F+VTAS DGH+KFWKKM +G+EFVKHY +HL+ + LAVS DG RLC+TSAD+SIKFYDV++FDM +M+++ + P WI +G +V VAD S + +Y ++ SA+ H +PV + +N AN V+S D+ G++EYW A+ Y P G V FKFK +TDLY+LAK+
Sbjct: 39 AYLKNLPSAAMYERSFMHRATVSHVLVAP-ETQFIVTASVDGHVKFWKKMAKGIEFVKHYKAHLQDVRGLAVSADGLRLCSTSADRSIKFYDVLAFDMVNMLSVAFTPAECCWISAKGAIDPKVVVADQASSALRIYTAESSANEPVHTINQLHAAPVTVVAYNPVANCVISADQKGLIEYWDADTYKFPTKDKGVVKFKFKGETDLYELAKS 250
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Match: A0A7J7Q2F9_9CHLO (PPIase cyclophilin-type domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q2F9_9CHLO) HSP 1 Score: 216 bits (550), Expect = 7.400e-63 Identity = 108/212 (50.94%), Postives = 143/212 (67.45%), Query Frame = 1
Query: 28 QAYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSDGHIKFWKKMPEGVEFVKHYHSHLEPIHDLAVSQDGQRLCTTSADKSIKFYDVVSFDMSHMIALKYAPTRAAWIHGRG-RQGRVAVADADSPEIHVY-LSDGSADAVGRFAG-HGSPVVSLGFNEQANTVVSGDRNGVLEYWGAEEYGRPPPGAVSFKFKMDTDLYDLAKA 654
Q YL+ALPSA MYE+SYMHRD VT+V TP TDF++T S+DGH+KFWKK +GVEFVKHY SH+ + LA S DG + S D+S+K YDV+ FDM M+ L Y P A WI +G ++A++D +SP IH+Y ++ GS + + + H SPV + FN ANTV+S D G +EYW E++ + P GAV F KMDTDL+ LA+A
Sbjct: 103 QQYLDALPSAQMYEKSYMHRDTVTHVVATP--TDFIITGSADGHLKFWKKQEQGVEFVKHYRSHIGAVDGLAASHDGSLCVSISRDRSVKVYDVLGFDMIVMMKLPYTPGAAEWIFKKGDAASKLAISDLNSPAIHIYDVASGSEEPIASLSSLHASPVAVMRFNAAANTVISSDAKGFIEYWSCEDF-KHPAGAVKFTMKMDTDLFALARA 311 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70047.14662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70047.14662.1 >prot_H-elongata_contig70047.14662.1 ID=prot_H-elongata_contig70047.14662.1|Name=mRNA_H-elongata_contig70047.14662.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp MYYFHPCPPQAYLEALPSAPMYERSYMHRDVVTNVALTPCGTDFLVTASSback to top mRNA from alignment at H-elongata_contig70047:469..2129- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70047.14662.1 ID=mRNA_H-elongata_contig70047.14662.1|Name=mRNA_H-elongata_contig70047.14662.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1661bp|location=Sequence derived from alignment at H-elongata_contig70047:469..2129- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70047:469..2129- >mRNA_H-elongata_contig70047.14662.1 ID=mRNA_H-elongata_contig70047.14662.1|Name=mRNA_H-elongata_contig70047.14662.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1308bp|location=Sequence derived from alignment at H-elongata_contig70047:469..2129- (Himanthalia elongata Himel1 dioecious)back to top |