mRNA_H-elongata_contig69972.14644.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: D7FZ17_ECTSI (Domain repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ17_ECTSI) HSP 1 Score: 263 bits (673), Expect = 1.600e-82 Identity = 131/186 (70.43%), Postives = 154/186 (82.80%), Query Frame = 1
Query: 1 GENDWGQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDD-EDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGGIKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
G NDWGQLG+GD +DRGDDP MG+ L VDLGT+PSG G+AVA+A++TGQQFTCVLVEGG VKCFGRNDEGQCGRGNLD ++G++ EDMGD+LPYV+LGTGVE++S+SSGT++TCA LL GG+KCWGGNSYGG+GVGDS N GD+ M + VDLGTGE G V G RH CAIL GGSVK
Sbjct: 112 GRNDWGQLGKGDFLDRGDDPATMGNNLTAVDLGTAPSGNGTAVAVAITTGQQFTCVLVEGGGVKCFGRNDEGQCGRGNLDTNVGSNGLEDMGDNLPYVNLGTGVEMISVSSGTASTCAALLGGGVKCWGGNSYGGLGVGDSYNVGDEEDDMGDNVQEVDLGTGETGYYVAYGLRHACAILMGGSVK 297
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: A0A6H5L5B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5B3_9PHAE) HSP 1 Score: 261 bits (666), Expect = 2.810e-79 Identity = 129/186 (69.35%), Postives = 152/186 (81.72%), Query Frame = 1
Query: 1 GENDWGQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDD-EDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGGIKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
G NDWGQLG+GD +DRGDDP MG+ L VDLGT+PSG G+AVA+A++TGQQFTCVLVEGG VKCFGRNDEGQCGRGNLD ++G++ EDMGD+LPYVDLG GV+ +S+SSGT++TCA LL GG+KCWGGNSYGG+GVGDS N GD+ M + VDLGTGE G V G RH CAIL GG+VK
Sbjct: 150 GRNDWGQLGKGDFLDRGDDPATMGNNLTAVDLGTAPSGNGTAVAVAITTGQQFTCVLVEGGGVKCFGRNDEGQCGRGNLDTNVGSNGLEDMGDNLPYVDLGAGVQAISVSSGTASTCAALLGGGVKCWGGNSYGGLGVGDSYNVGDEEDDMGDNLQEVDLGTGETGYYVAYGLRHACAILMGGNVK 335
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: A0A3M1N8Z3_9BACT (T9SS C-terminal target domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1N8Z3_9BACT) HSP 1 Score: 149 bits (375), Expect = 6.280e-40 Identity = 84/180 (46.67%), Postives = 111/180 (61.67%), Query Frame = 1
Query: 16 GQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDDEDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGGIKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
GQLG GD+ DRGD P MGD L VDLGT + T A++ G +C L + G+VKC+G+N GQ G G++++ G +MGD+LP VDLGTG +I++G S TCA L DG +KCWG YG +G GD+ +RGDDP M +DLG G ++ +G H CA+L GSVK
Sbjct: 2 GQLGLGDTSDRGDAPGEMGDNLPAVDLGTGRTPT------ALALGNSHSCALFDDGAVKCWGKNRRGQLGLGDINDR-GDAPGEMGDNLPTVDLGTGRTATAIAAGESFTCALLDDGSVKCWGEGDYGQLGQGDTAHRGDDPGEMGDNLPPIDLGAGRTAIAIAAGSFHACALLDDGSVK 174
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: A0A017SY21_9DELT (Uncharacterized protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017SY21_9DELT) HSP 1 Score: 152 bits (384), Expect = 1.150e-39 Identity = 90/185 (48.65%), Postives = 113/185 (61.08%), Query Frame = 1
Query: 1 GENDWGQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDDEDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGGIKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
G ND GQLG GD++ RG D MGD+L V LGT S AIAVS TCVL+ GGSVKC+G N GQ G G+ S GT DMG++LP V+LGTG +S+G+ TCA L DG +KCWG N YG +G+GD+ NRG + M V+LGTG+ V +G RH CA+L ++K
Sbjct: 409 GNNDSGQLGLGDTLSRGGDTAQMGDSLPAVALGTGQS------AIAVSAAGGHTCVLLNGGSVKCWGYNTYGQLGLGSP-ASRGTSPSDMGNNLPAVNLGTGKTATLVSAGSQYTCAVLNDGSVKCWGNNDYGQLGLGDTFNRGTGSTSMGDNLPVVNLGTGKTATLVSAGGRHTCAVLNDSTIK 586
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: A0A150PNJ9_SORCE (Uncharacterized protein n=2 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150PNJ9_SORCE) HSP 1 Score: 152 bits (385), Expect = 1.720e-39 Identity = 86/181 (47.51%), Postives = 110/181 (60.77%), Query Frame = 1
Query: 13 WGQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDDEDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGGIKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
WGQLG GD+VDRG P+ MGD L EVDLGT + A A++ G TC +++ VKC+G N EGQ G G++D G +MGD LP VDLGTG +I+ G+ TC L + IKCWG N + +G+GD+D RGD PS M VDLGTG K++ +G RH CAIL +K
Sbjct: 187 WGQLGLGDTVDRGSGPNEMGDNLPEVDLGTGRT------AKAIAAGVSHTCAILDNDQVKCWGDNIEGQLGLGDMDPR-GDGPNEMGDDLPEVDLGTGRTAKAIAVGSGHTCVILDNDRIKCWGSNGFSELGLGDTDRRGDGPSEMGDDLPEVDLGTGRTAKAIAAGARHTCAILDNDQLK 360
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: A0A7S0U564_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U564_HEMAN) HSP 1 Score: 139 bits (350), Expect = 1.820e-38 Identity = 84/185 (45.41%), Postives = 111/185 (60.00%), Query Frame = 1
Query: 1 GENDWGQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDDEDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGGIKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
G+N +GQLG GD+ RG D MGDAL VDLG G G V ++VS+G Q +C L+E G VKC+G+ND GQ G G++ G + MGD+LP+VD G V+ + +G S +C L D +KCWG N +G +GVGD NRGD+ + T V LG SV++G H CA+L SVK
Sbjct: 3 GDNSYGQLGVGDADQRGGSSDGMGDALPFVDLG----GGGMGV-LSVSSGHQHSCALLESGGVKCWGQNDLGQLGLGDV-VGRGQTGQTMGDALPFVDFGGDRRVLWLDAGHSHSCVVLDDHSVKCWGYNRFGQLGVGDIFNRGDEAGEVSGTGTAVKLGGNRTAVSVFTGHFHSCAVLDDASVK 181
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: A0A2E7J5D0_9EURY (Uncharacterized protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E7J5D0_9EURY) HSP 1 Score: 146 bits (368), Expect = 3.570e-37 Identity = 82/185 (44.32%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 1 GENDWGQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDDEDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGGIKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
G N++GQLG G++ D P+ MG L V LG++ + + VS G + C L++ GSVKC+GRN G G+G +IG + E+MGD LP +DLG G ISSG+ TCA L DG +KCWG G +G+G+S N GD + M VDLGTG S+ SG H CAIL G VK
Sbjct: 137 GYNNYGQLGHGNTSTASDGPNEMGANLAFVPLGSNRTS------LQVSVGAEHACALLDNGSVKCWGRNQNGVTGQGTTSGNIGDESEEMGDDLPVIDLGAGRTATEISSGSYHTCAILEDGSVKCWGNGGSGRLGIGNSSNMGDGANEMGDYLPAVDLGTGRTAISISSGNSHTCAILDSGVVK 315
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: A0A2J7ZMN6_9CHLO (RCC1 and BTB domain-containing protein 2 n=2 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZMN6_9CHLO) HSP 1 Score: 142 bits (359), Expect = 4.300e-37 Identity = 78/180 (43.33%), Postives = 114/180 (63.33%), Query Frame = 1
Query: 16 GQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDDEDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGGIKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
GQLG G S + GDDP MGD L VDLGT + A+A++ G + TC +++ G +KC+G N + Q G G+ +S G+ +MGD+LPYV+LG G+ SI++G + TCA L +G +KCWGGN+YG +G+GD+ +RG + M VDLGTG+ K+V +G CA+ ++K
Sbjct: 225 GQLGLGHSDNIGDDPGEMGDDLPAVDLGTGRT------AVALAAGDRHTCAILDDGGIKCWGNNGDYQLGLGDS-KSRGSTSTNMGDALPYVNLGQGLTATSIAAGAAHTCAVLDNGALKCWGGNTYGQLGLGDTKSRGGSAADMGDALPNVDLGTGQQAKTVTAGLHSTCAVTASSNLK 397
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: A0A4Q5ZUK8_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5ZUK8_9DELT) HSP 1 Score: 142 bits (358), Expect = 5.650e-37 Identity = 87/186 (46.77%), Postives = 109/186 (58.60%), Query Frame = 1
Query: 1 GENDWGQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDDEDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGG-IKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
G+ND GQLG GD++ RGD MGDAL VDLG T AV+ G TC L+EGG +C+G N G G G+ + S G +MGD+LP+VDLGTG + ++S+G TCA LLDGG +KCWG N G +G GD+ RG P M VDLG G V ++ S H CA+L G VK
Sbjct: 63 GQNDRGQLGLGDTISRGDKTGQMGDALPAVDLGAGIEAT------AVAAGFWHTCALLEGGKARCWGENIYGTLGTGD-NVSHGAKPGEMGDALPFVDLGTGATIKALSAGREFTCA-LLDGGKVKCWGNNEMGQLGQGDTVTRGSKPGEMGDALPAVDLGAGAVAVAISSQSFHTCALLADGRVK 240
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Match: A0A4V5PJ66_9DELT (Uncharacterized protein n=2 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4V5PJ66_9DELT) HSP 1 Score: 142 bits (359), Expect = 6.990e-37 Identity = 82/185 (44.32%), Postives = 111/185 (60.00%), Query Frame = 1
Query: 1 GENDWGQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGQQFTCVLVEGGSVKCFGRNDEGQCGRGNLDESIGTDDEDMGDSLPYVDLGTGVEVVSISSGTSTTCATLLDGGIKCWGGNSYGGVGVGDSDNRGDDPSGMLPTYRGVDLGTGEVGKSVYSGQRHHCAILTGGSVK 555
G N GQLG GD RG D MGDAL VDLG+ +AIA++ G TC L+ GG+VKC+G N GQ G G+ E G +MGD+LP +DLG G +I++G + CA L G IKCWG N G +G+GD+++RGD P M V+LG+G+ ++ +G H+CA+L G+VK
Sbjct: 165 GINSEGQLGLGDMESRGHAADEMGDALPNVDLGSGK------IAIAIAAGYSHTCALLAGGAVKCWGSNYSGQLGLGDQ-EDRGDAPGEMGDALPAIDLGPGQSATAIAAGAAHVCALLAGGAIKCWGENHLGQLGLGDNNDRGDQPGEMGSALPTVNLGSGQKAAAITAGAYHNCALLMDGAVK 342 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69972.14644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69972.14644.1 >prot_H-elongata_contig69972.14644.1 ID=prot_H-elongata_contig69972.14644.1|Name=mRNA_H-elongata_contig69972.14644.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp GENDWGQLGQGDSVDRGDDPDLMGDALLEVDLGTSPSGTGSAVAIAVSTGback to top mRNA from alignment at H-elongata_contig69972:437..3188- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69972.14644.1 ID=mRNA_H-elongata_contig69972.14644.1|Name=mRNA_H-elongata_contig69972.14644.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2752bp|location=Sequence derived from alignment at H-elongata_contig69972:437..3188- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69972:437..3188- >mRNA_H-elongata_contig69972.14644.1 ID=mRNA_H-elongata_contig69972.14644.1|Name=mRNA_H-elongata_contig69972.14644.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1110bp|location=Sequence derived from alignment at H-elongata_contig69972:437..3188- (Himanthalia elongata Himel1 dioecious)back to top |