mRNA_H-elongata_contig11888.1461.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11888.1461.1
Unique NamemRNA_H-elongata_contig11888.1461.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A6H5J8W5_9PHAE (SAM-dependent MTase TRM10-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J8W5_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 2.160e-99
Identity = 164/272 (60.29%), Postives = 206/272 (75.74%), Query Frame = 1
Query:    1 EQTTKRLGRKTGRSAASKRSRSKRRERRARIVEEFGVEELKKIILKERRDKEEQLGRLKAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNVGAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVAHGIRRPRGGAWRG----AAPSNGSGWG 804
            ++ ++R GRK GR+A SKR+RSKR++    ++ E G++E KK++LK + +KEEQ  R++ AMDDP SL+LV+DL+WAE  A GKELSSL KQLCYVY+R KAS  PP LTLTSY+G+ AA L++ GA SWL  R PL VF VFD T ++YLSPDAEEPL++V+ T+VYV+GGIVDRNL KG+T  AA+  +AR ARLPFD+YLPE+   DRVLTVCACVGVL+ V AGE WR AL++SVP R V    RR RG AWRG    A  +  SGWG
Sbjct:   38 KRNSRRQGRKRGRAATSKRTRSKRKQNAEMLINEIGIDEFKKMVLKGKLEKEEQQERMRRAMDDPDSLRLVIDLNWAES-APGKELSSLVKQLCYVYSRAKASSMPPRLTLTSYQGKVAAALESAGADSWLVDRNPLGVFTVFDPTEIIYLSPDAEEPLDQVLDTNVYVVGGIVDRNLRKGLTLGAADGARARAARLPFDEYLPEIPRGDRVLTVCACVGVLMGVRAGEGWRDALQKSVPRRGVEKAARRARGRAWRGTVAEAVGAGQSGWG 308          
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A4D9D7D2_9STRA (tRNA (guanine(9)-N(1))-methyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7D2_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.160e-22
Identity = 70/208 (33.65%), Postives = 114/208 (54.81%), Query Frame = 1
Query:  193 PCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASIT---PPVLTLTSYRGRTAAVLDNVGAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVV-ATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGE-NWRAALEQSVPHRRVAHGIR----RPRGGAWRGAAPSN 789
            P  L++ +DL + E     +   SL +Q+ + Y+ +K + +    P+  +TS++G TA VL   G  +W  +R    V  +F   S+VYL+PDA++ L   +  + VYVIGGIVDR + +G++  AA+  +  TARLP +    + +   R L V   + VL++VHA + +WR AL + +P R+ A   +    R RGG+  G    N
Sbjct:  117 PRHLRIALDLHYGERIHGLRGTRSLTQQVGWCYHALKRASSFDHTPIFHVTSFQGPTAEVLRGSGVHNWPIYRHAASVVEIFPRPSIVYLTPDADQVLAAPMDLSKVYVIGGIVDRTVVRGVSAQAAKEWEVETARLPLELLDLKANKATRALNVDTVLKVLMSVHANKGDWRGALTECLPKRKAAARSKKEEKRDRGGSGEGGTSGN 324          
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: K8YSZ8_NANGC (tRNA (guanine(9)-N(1))-methyltransferase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSZ8_NANGC)

HSP 1 Score: 108 bits (270), Expect = 1.600e-21
Identity = 66/186 (35.48%), Postives = 106/186 (56.99%), Query Frame = 1
Query:  193 PCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASIT---PPVLTLTSYRGRTAAVLDNVGAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVV-ATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGE-NWRAALEQSVPHRRVA 735
            P  L++ +DL + E     +   SL +Q+ + Y+ +K + +    P+  +TS++G TA VL   G  +W  +R    V  VF   S+VYL+PDA++ L   +  + VYVIGGIVDR + +G++  AA+  +  TARLP +    +     R L V   + VL++VHA + +WRAAL + +P R+ A
Sbjct:  252 PRHLRIALDLHYGERIHGIRGTRSLTQQVGWCYHALKRASSFDNTPIFHVTSFQGPTADVLRGSGVHNWPIYRHAASVVEVFPRPSIVYLTPDADQVLAAPLDLSKVYVIGGIVDRTVVRGVSAQAAKEWEVETARLPLELLDLKAKKASRALNVDTVLKVLMSVHANKGDWRAALTECLPKRKAA 437          
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A813A211_SYMMI (TRMT10B protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813A211_SYMMI)

HSP 1 Score: 101 bits (252), Expect = 6.940e-21
Identity = 70/198 (35.35%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  196 CSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYR--GRTAAVLDNVGAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRV----AHGIRRPRGGAWR 771
              L + +DL+ ++ + S +E +SLA Q+   Y  ++ S  P  L L S    G  A V+      +W  HR   DV   F  + +V+LSPDA+EPL+ VV   VYVIGG+VD+N+ + IT   A+       RLP  +  P  S R+ VL V + V  L    A  +W+ AL   VP R++    A  +   +GG WR
Sbjct:    3 ADLHICIDLALSD-ENSARENNSLAIQIRNAYGVIRKSEIPVALHLASLAPGGCIAEVIAKQNCDAWHIHRHAEDVEDAFAPSELVFLSPDADEPLDAVVPGKVYVIGGVVDKNIKRKITLGKAQEHDIPAYRLPVREIFP--SCRNTVLNVDSVVQALCVFAAHRDWQVALRGCVPLRKLSADAAAALGAEQGGRWR 197          
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A0M0JFP8_9EUKA (RNA (Guanine-9-)-methyltransferase domain-containing protein 2-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JFP8_9EUKA)

HSP 1 Score: 102 bits (255), Expect = 4.480e-20
Identity = 69/190 (36.32%), Postives = 108/190 (56.84%), Query Frame = 1
Query:  175 KAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNVGAG--SWLAHRWPLDVFAVF-DNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVA 735
            +AAM+       VVDLS+ E   + +E++SLA+QL Y ++  + S  P  L  TS  G+  A L +   G  +W     P     VF +++S+VYLS +++  L+ + +++VY++GG+VD N  KG+T   A     RTARLP D+Y+  +S R RVL V   V +L    +G +W + L + +P RR A
Sbjct:  138 RAAMEHRALPTCVVDLSFDEL-MNDREIASLAQQLSYCHSANRRSAFPMRLAFTSVGGKLEAKLKSGWPGWRNWAIRPEPRHYLEVFPEHSSLVYLSSESDVVLDTLDSSEVYIVGGLVDHNKQKGLTHRLASEANVRTARLPIDEYM-SMSQR-RVLAVNHVVEILTLRASGLDWTSVLTKVMPQRREA 324          
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A067BJ29_SAPPC (SAM-dependent MTase TRM10-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BJ29_SAPPC)

HSP 1 Score: 99.8 bits (247), Expect = 1.210e-19
Identity = 71/205 (34.63%), Postives = 106/205 (51.71%), Query Frame = 1
Query:  127 IILKERRDKEEQLGRLKAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNVGA-GSWLAHRW-PLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVA 735
            +++++ R   ++   L AA + P    +V+D  + E   S KE  SL +Q+ + Y   K S TP  + +TS RG   A L  +G    WLA    P     VF   S+VYL+ D+   ++E+ +  VY+IGGIVDRN  KG+T   A A    TA+LP D  L E+    RVLTV     +L+     ++W  A   ++P R+ A
Sbjct:   74 VLMRKERAIAKRESFLMAASEGPT---IVIDCGFEEA-MSSKEKKSLTQQIMFSYGINKRSETPANVHVTSVRGEAEANLTKIGGFNDWLAFSTTPKCYMDVFRKESLVYLTADSPNVIDELQSDKVYIIGGIVDRNRLKGVTYEKAVAQGIATAKLPLDKVL-EMGQATRVLTVNHVFQILVNYRTAQDWTQATLSALPARKGA 273          
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A1V9ZIH2_9STRA (RNA (Guanine-9-)-methyltransferase domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIH2_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.260e-19
Identity = 70/191 (36.65%), Postives = 99/191 (51.83%), Query Frame = 1
Query:  172 LKAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNVGAGS-WLAHRWPLDVFA-VFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVAH 738
            L AA + P    +V+D  + E D S KE  SL++Q+ + Y   K   +P  + LTS  G T A L  +G  S WLA       +   F   S+VYL+ D+   +EE+ +  VY+IGGIVDRN  KG T   A A    TA+LP D  + E+    RVLTV     +L+     ++W  A   ++P R+ AH
Sbjct:   92 LMAANEGPT---IVIDCGFEE-DMSSKEKKSLSQQIMFSYGINKRCESPATVFLTSLHGETEANLQKIGGFSEWLAFDATTKCYMDTFRKESLVYLTADSPNVIEELSSDKVYIIGGIVDRNRLKGATYEKAVAQGIATAKLPLDKVV-EMGQATRVLTVNHVFQILVDYQTKQDWTQATMSALPARKGAH 277          
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A2P6V0W7_9CHLO (tRNA (Guanine-N1)-methyltransferase domain containing n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0W7_9CHLO)

HSP 1 Score: 100 bits (248), Expect = 1.530e-19
Identity = 78/194 (40.21%), Postives = 99/194 (51.03%), Query Frame = 1
Query:  217 DLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAA-VLDNVGAGSWLA---HRWPL-DVFAVFDNTSVVYLSPDAEEPLEEVVATD-VYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRVAHGIRRPRGGAWRGAA 780
            D +     A+ +E+ SL KQL       K +  P  L   S+ G      L+ +GA  W A   H  PL D+F V    S+V LSPDAEEPL   +  D VYVIGG+VDR + KG T A A+   AR  RLP  + L  +     VL +      L+AVHAG+ W AALE +VP R     +RRP      GAA
Sbjct:   85 DAATPSAAATAREVRSLCKQLQMCAAANKRASRPVNLHFASFNGEVRRFALEGMGAAGWPAARGHAEPLPDLFPV---DSLVVLSPDAEEPLLGGLEKDKVYVIGGLVDRTVQKGATLALAQRCGARAVRLPIVETLGGLPTGRGVLNINDVFEALLAVHAGQCWAAALEAAVPQR-----LRRPHDAPAGGAA 270          
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A8B8DCP1_CRAVI (tRNA methyltransferase 10 homolog B-like n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DCP1_CRAVI)

HSP 1 Score: 98.6 bits (244), Expect = 4.880e-19
Identity = 70/208 (33.65%), Postives = 105/208 (50.48%), Query Frame = 1
Query:  127 IILKERRD-KEEQLGRLKAAMDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNV----GAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLP--EVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRR 729
            +IL  R++ +EE   +L+ AM   C  ++ VDLS  E   + KE S LA+QLC +Y   K +  P  +    +        + +    G   +        V  +FD   V+YL+PDAE+ LEE+    VYVIGGIVD ++ K ++K  A A    T RLP D Y+   E     +VL +     +L+   +  +WRAAL + VP R+
Sbjct:   96 VILPTRKEMREEMKSKLETAM--MCGQRICVDLSM-ENTMTTKERSKLAQQLCRLYGVNKKADVPAHVYFAGFDKNGELYQECIRKIDGFEKYQVEMTAAPVSELFDVKDVIYLTPDAEDMLEELDKDKVYVIGGIVDESIIKNLSKQKANAFNIPTVRLPIDRYMKKKEQIHFSQVLAINQVFEILVTYLSSNDWRAALSRGVPERK 300          
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Match: A0A7S4NN01_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NN01_GUITH)

HSP 1 Score: 97.4 bits (241), Expect = 1.130e-18
Identity = 64/177 (36.16%), Postives = 94/177 (53.11%), Query Frame = 1
Query:  205 QLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTLTSYRGRTAAVLDNV-GAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEEVVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDRVLTVCACVGVLIAVHAGENWRAALEQSVPHRRV 732
            ++V+DLS+ +   + KE+ SL  QL + Y   +AS  P  L LTS   RTA  L  + G  +W  H        VF    VVYL+ ++   + E+    VY IGGIVD N  KG+TK  A+     TA+LP D  +     R +VLTV     +L+  H   NW+ +L+Q++P R++
Sbjct:  127 RVVIDLSF-DDLMTEKEVRSLVTQLAHSYGTNRASGKPLDLYLTSVDKRTAEGLKKISGFDNWRCHVETRHFSEVFPKNEVVYLTSESSNTMNELQKDKVYCIGGIVDHNRLKGLTKQKADENGWDTAKLPLDGNIDLGESR-KVLTVNHVCSILLKYHETGNWKESLKQAMPERKL 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11888.1461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8W5_9PHAE2.160e-9960.29SAM-dependent MTase TRM10-type domain-containing p... [more]
A0A4D9D7D2_9STRA2.160e-2233.65tRNA (guanine(9)-N(1))-methyltransferase n=1 Tax=N... [more]
K8YSZ8_NANGC1.600e-2135.48tRNA (guanine(9)-N(1))-methyltransferase n=1 Tax=N... [more]
A0A813A211_SYMMI6.940e-2135.35TRMT10B protein n=1 Tax=Symbiodinium microadriatic... [more]
A0A0M0JFP8_9EUKA4.480e-2036.32RNA (Guanine-9-)-methyltransferase domain-containi... [more]
A0A067BJ29_SAPPC1.210e-1934.63SAM-dependent MTase TRM10-type domain-containing p... [more]
A0A1V9ZIH2_9STRA1.260e-1936.65RNA (Guanine-9-)-methyltransferase domain-containi... [more]
A0A2P6V0W7_9CHLO1.530e-1940.21tRNA (Guanine-N1)-methyltransferase domain contain... [more]
A0A8B8DCP1_CRAVI4.880e-1933.65tRNA methyltransferase 10 homolog B-like n=2 Tax=C... [more]
A0A7S4NN01_GUITH1.130e-1836.16Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11888contigH-elongata_contig11888:429..3307 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score273.5
Seed ortholog evalue1e-70
Seed eggNOG ortholog2880.D7G7Q1
KEGG koko:K15445
EggNOG free text desc.tRNA (guanine(9)-N(1))-methyltransferase activity
EggNOG OGsKOG2967@1,KOG2967@2759
EC2.1.1.221
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiontRNA methyltransferase TRMD/TRM10-type domain
Ec32 orthologEc-06_000800.1
Exons3
Model size1742
Cds size780
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11888.1461.1prot_H-elongata_contig11888.1461.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11888 1368..2528 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929695.5653825-UTR-H-elongata_contig11888:428..5851622929695.5653825-UTR-H-elongata_contig11888:428..585Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11888 429..585 +
1691679122.1547582-UTR-H-elongata_contig11888:428..5851691679122.1547582-UTR-H-elongata_contig11888:428..585Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11888 429..585 +
1622929695.5802963-UTR-H-elongata_contig11888:1341..13671622929695.5802963-UTR-H-elongata_contig11888:1341..1367Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11888 1342..1367 +
1691679122.1653621-UTR-H-elongata_contig11888:1341..13671691679122.1653621-UTR-H-elongata_contig11888:1341..1367Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11888 1342..1367 +
1622929695.6157808-UTR-H-elongata_contig11888:2528..33071622929695.6157808-UTR-H-elongata_contig11888:2528..3307Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11888 2529..3307 +
1691679122.1944957-UTR-H-elongata_contig11888:2528..33071691679122.1944957-UTR-H-elongata_contig11888:2528..3307Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig11888 2529..3307 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929695.5917625-CDS-H-elongata_contig11888:1367..15551622929695.5917625-CDS-H-elongata_contig11888:1367..1555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11888 1368..1555 +
1691679122.1765757-CDS-H-elongata_contig11888:1367..15551691679122.1765757-CDS-H-elongata_contig11888:1367..1555Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11888 1368..1555 +
1622929695.6033812-CDS-H-elongata_contig11888:1936..25281622929695.6033812-CDS-H-elongata_contig11888:1936..2528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11888 1937..2528 +
1691679122.1849341-CDS-H-elongata_contig11888:1936..25281691679122.1849341-CDS-H-elongata_contig11888:1936..2528Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11888 1937..2528 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11888.1461.1

>prot_H-elongata_contig11888.1461.1 ID=prot_H-elongata_contig11888.1461.1|Name=mRNA_H-elongata_contig11888.1461.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=260bp
MDDPCSLQLVVDLSWAEGDASGKELSSLAKQLCYVYNRVKASITPPVLTL
TSYRGRTAAVLDNVGAGSWLAHRWPLDVFAVFDNTSVVYLSPDAEEPLEE
VVATDVYVIGGIVDRNLDKGITKAAAEAGKARTARLPFDDYLPEVSGRDR
VLTVCACVGVLIAVHAGENWRAALEQSVPHRRVAHGIRRPRGGAWRGAAP
SNGSGWGPGKALLGSNDTCHVVTESASTIGDRGSVVLESRKDSSNEDRGK
DVSTSARDR*
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mRNA from alignment at H-elongata_contig11888:429..3307+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11888.1461.1 ID=mRNA_H-elongata_contig11888.1461.1|Name=mRNA_H-elongata_contig11888.1461.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2879bp|location=Sequence derived from alignment at H-elongata_contig11888:429..3307+ (Himanthalia elongata Himel1 dioecious)
GAACAGACAACGAAACGGTTAGGGCGAAAGACGGGCAGATCCGCCGCATC AAAACGATCAAGGTCCAAGCGCAGAGAAAGAAGAGCGCGAATAGTCGAAG AATTCGGCGTAGAGGAATTGAAGAAAATAATCCTGAAGGAAAGGCGGGAC AAAGAAGGTCAGCTGGTATACAGTCCCGTCCCGTCCCGTCCCATACATTG ATTGCCTTTTTGTCTAGGGGAAGGGGGATGTCTGATAATTCTTCCTGCCG ATAGGGCCCTTTTTCACCGTTGGGGATCTTTCGATCTCTTTCCGGTTTAC TAACAATAGCGTATACTGGGTTCATGTTAGTATTAATGTTCGTATTAATA TTAGTATGAACCCCTATGGAACTCGATTTGATTTTTTACATACTAAATTC AAGGTCAAACTTGAAACTAGCATTAATATGCTTTCTTACAGTGATGCGAG CTCAGCACTCCAGGACCTCGTCAAGAAATGGTCGGACCTTCCGCTGCCGC ATTTCTTTTAATTCTGAATTTCGGAGTCAGGATTGATGCTCAACTGGACA TTATGCCGTTCAGGTTCTAACCGGTTGAAGTTTTTTAACAGGGCGGGATA GGTGCAGTAGTATTTAGTCGGTCGCCCTTATTGGTTTCATCTCGCTAACC TCACAGATCGTGGGCAGTGGTTTGCTGCGTCTAGAGACGCCTGTCCAGAG GGTTTCCATGCTAATGGATACATTCTGATCTGTGAATCTGAGAAGGGACG AAATGGACCGAGAACGGTATGCAGACGGTATGCAGTGTAGAGCAAGCACT CCTAACTACTGACCCCTACAGACCCCTAGATGTTGGCGTCGCATGATGTT GAGAGGGCGTGATTAATTCATTTCACGCGACCGCGTATCTCCCCGCACCA CACCTTTCGTCAGAGCAACTGGGACGGTTGAAAGCCGCGATGGACGATCC ATGCTCTCTGCAGCTAGTGGTCGACCTTAGTTGGGCAGAGGGCGACGCCT CCGGCAAGGAGCTGTCGAGCCTGGCGAAGCAGCTCTGCTATGTGTACAAT CGCGTCAAGGCCAGCATAACGCCTCCAGTCCTCACGCTGACGTCTTACAG AGGCAGGACTGCCGCAGTTTTGGACAAGTGAGTGGTTCATGTTCTCACAT TATGCAATCCCAATCGGGTCTATTATAAAACCAAATTCGCTTGAGGCATG ATTGTTTTTATGGTTGCCTGAACAGGGGACGGTTGGCAGGATGAGTAGAA TTACATCCGCGTCAGCGCAGCCAGTAGCTGGGGAGCTCAAATGATACAGT TGAATCAACATCATACCAGCTATATAAAATAATTATATCTGATCTAATGG GACGGTTGATTCTGTGATCATGGAAATCTGCTTAGATCCGAGAGAGGACT AGGGGATATAATGACTCGCCAAGCAACACGCAAGGGCTGGCGCGTCCTTG ACCACCCCTCGACCAATATACGATAATGTTGCCGCCGACATCGTTTGATA TCGTACAGCGTCGGAGCCGGTTCGTGGCTGGCCCACAGATGGCCGCTCGA TGTTTTCGCAGTGTTCGACAACACCAGCGTGGTGTACCTCAGCCCCGATG CCGAGGAGCCTTTGGAAGAGGTGGTCGCCACCGATGTGTACGTGATAGGG GGTATCGTGGATCGTAATCTGGACAAGGGGATCACTAAGGCCGCTGCGGA GGCGGGCAAGGCGCGAACGGCTCGACTGCCTTTCGACGATTACCTTCCCG AGGTGTCGGGCAGAGACCGGGTTTTAACTGTTTGTGCGTGCGTCGGGGTT CTGATTGCGGTACATGCCGGTGAAAACTGGCGAGCGGCGCTCGAACAAAG CGTCCCTCATCGACGAGTGGCCCACGGTATTCGGCGACCTCGAGGGGGAG CGTGGCGAGGGGCGGCGCCTTCGAACGGCTCAGGGTGGGGGCCAGGCAAG GCGTTGCTCGGCAGCAATGATACGTGTCATGTCGTTACGGAAAGTGCCTC CACCATCGGTGACAGGGGTAGCGTTGTGCTGGAAAGTAGAAAAGATAGCA GCAACGAGGATCGCGGGAAAGACGTCTCCACGAGTGCGCGCGACCGGTGA TGTTCATTTTATAACCCTTATGAGCTATGAAAACTGTCGAGGCGGCCGTT CGGGCGGAGAGAAAGGGCGGTGATGCCGCCAAGAAGGATGATAATCGGTA AAGTTGGGGGCCCGGGGCACCGTCGGAGCCGCGAGATGGGATGGGATATA CCTACGAGACGACCTCAAGGCCTTCAAGGTAGAGAGTGATCAGATCACGA GGGCCCAGGACACTGCTAACTGCCTCGCCACCCTCATAAAGGGGAAGATT GTATTCATAGGCGAGTGCAGAGAGAAATAAGGCACTGGGACCCGCCAAAG ACCATGATGGTTTCGAGGAACGCTCGCCACTTCCAAATAAAAACCGCATG ATACACAAAATGTATGTCCTGGGTATAGATGGTTGTAGTGTTTTAGTGTA TTATGTCGAACCCAAGGAGGGATCGAGGCAATGAGAAATATGGGGCAGGG ACTGGCGTTCTCGTGTGATGCTTGATAATTGGAGAGTTTCCCTCCGAAAA CCCCGTAGTCTGCTTGGTAACCTTCTTGGCTAGGTGGATGAGTCGAATGA GTAGTCGAATGCCTACATTTTCTCACCGTTTGCGTATTATTTTTCGTACC CACGGCCGACTATCATTATTTTCATTTCTGCTCTTATTTCTGAGGTATCT GGCCTCAACCCTGGCTATTTGATACACACCCGAACAATGGACAGACGCTA CAAGAGCTATTTCAGTTACGTTCGATTCAATGCTGTGTGATGGCTTCGAA AACCCAAAACCCAAAAGACAAAAGAGAAG
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Coding sequence (CDS) from alignment at H-elongata_contig11888:429..3307+

>mRNA_H-elongata_contig11888.1461.1 ID=mRNA_H-elongata_contig11888.1461.1|Name=mRNA_H-elongata_contig11888.1461.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1560bp|location=Sequence derived from alignment at H-elongata_contig11888:429..3307+ (Himanthalia elongata Himel1 dioecious)
ATGGACGATCCATGCTCTCTGCAGCTAGTGGTCGACCTTAGTTGGGCAGA
GGGCGACGCCTCCGGCAAGGAGCTGTCGAGCCTGGCGAAGCAGCTCTGCT
ATGTGTACAATCGCGTCAAGGCCAGCATAACGCCTCCAGTCCTCACGCTG
ACGTCTTACAGAGGCAGGACTGCCGCAGTTTTGGACAAATGGACGATCCA
TGCTCTCTGCAGCTAGTGGTCGACCTTAGTTGGGCAGAGGGCGACGCCTC
CGGCAAGGAGCTGTCGAGCCTGGCGAAGCAGCTCTGCTATGTGTACAATC
GCGTCAAGGCCAGCATAACGCCTCCAGTCCTCACGCTGACGTCTTACAGA
GGCAGGACTGCCGCAGTTTTGGACAACGTCGGAGCCGGTTCGTGGCTGGC
CCACAGATGGCCGCTCGATGTTTTCGCAGTGTTCGACAACACCAGCGTGG
TGTACCTCAGCCCCGATGCCGAGGAGCCTTTGGAAGAGGTGGTCGCCACC
GATGTGTACGTGATAGGGGGTATCGTGGATCGTAATCTGGACAAGGGGAT
CACTAAGGCCGCTGCGGAGGCGGGCAAGGCGCGAACGGCTCGACTGCCTT
TCGACGATTACCTTCCCGAGGTGTCGGGCAGAGACCGGGTTTTAACTGTT
TGTGCGTGCGTCGGGGTTCTGATTGCGGTACATGCCGGTGAAAACTGGCG
AGCGGCGCTCGAACAAAGCGTCCCTCATCGACGAGTGGCCCACGGTATTC
GGCGACCTCGAGGGGGAGCGTGGCGAGGGGCGGCGCCTTCGAACGGCTCA
GGGTGGGGGCCAGGCAAGGCGTTGCTCGGCAGCAATGATACGTGTCATGT
CGTTACGGAAAGTGCCTCCACCATCGGTGACAGGGGTAGCGTTGTGCTGG
AAAGTAGAAAAGATAGCAGCAACGAGGATCGCGGGAAAGACGTCTCCACG
AGTGCGCGCGACCGGTGACGTCGGAGCCGGTTCGTGGCTGGCCCACAGAT
GGCCGCTCGATGTTTTCGCAGTGTTCGACAACACCAGCGTGGTGTACCTC
AGCCCCGATGCCGAGGAGCCTTTGGAAGAGGTGGTCGCCACCGATGTGTA
CGTGATAGGGGGTATCGTGGATCGTAATCTGGACAAGGGGATCACTAAGG
CCGCTGCGGAGGCGGGCAAGGCGCGAACGGCTCGACTGCCTTTCGACGAT
TACCTTCCCGAGGTGTCGGGCAGAGACCGGGTTTTAACTGTTTGTGCGTG
CGTCGGGGTTCTGATTGCGGTACATGCCGGTGAAAACTGGCGAGCGGCGC
TCGAACAAAGCGTCCCTCATCGACGAGTGGCCCACGGTATTCGGCGACCT
CGAGGGGGAGCGTGGCGAGGGGCGGCGCCTTCGAACGGCTCAGGGTGGGG
GCCAGGCAAGGCGTTGCTCGGCAGCAATGATACGTGTCATGTCGTTACGG
AAAGTGCCTCCACCATCGGTGACAGGGGTAGCGTTGTGCTGGAAAGTAGA
AAAGATAGCAGCAACGAGGATCGCGGGAAAGACGTCTCCACGAGTGCGCG
CGACCGGTGA
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