prot_H-elongata_contig69458.14596.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig69458.14596.1
Unique Name	prot_H-elongata_contig69458.14596.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	157

Homology

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A6H5JZ76_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ76_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 3.070e-85
Identity = 129/152 (84.87%), Postives = 143/152 (94.08%), Query Frame = 0

Query:    5 QNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLTKKKVRV 155
            +N TLSRDQYGVAYLPGFVGLNNLK TDFVNVVLH+LAH+PPLR+FFVEP NYKDSK+ LVHAFGEV+RR+WSPSNFKSAVSPHEFIQAVSYASKKRFRPG+Q+EA+DFL WLLNSLHQGLGGTRK G+ V+FQTFQGLVEV+TLTKKK  +
Sbjct:  188 KNTTLSRDQYGVAYLPGFVGLNNLKCTDFVNVVLHALAHVPPLRNFFVEPDNYKDSKSTLVHAFGEVVRRIWSPSNFKSAVSPHEFIQAVSYASKKRFRPGVQAEAIDFLAWLLNSLHQGLGGTRKAGSSVVFQTFQGLVEVETLTKKKATI 339

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A835Z9Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q1_9STRA)

HSP 1 Score: 212 bits (539), Expect = 5.710e-64
Identity = 103/150 (68.67%), Postives = 125/150 (83.33%), Query Frame = 0

Query:    5 QNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRK--VGT-VIFQTFQGLVEVKTLTKK 151
            +N TL+RDQYGVAYLPGFVGLNNL STD++NV LH+LAH+ PLRDFF++P NY   K+PLV AFGEVIRR+WS  NFKSAVSPHEF+QAVS AS KRF  G Q+E +DF++WLLNSLH GLGG++K   GT +I +TFQGLV V T+T++
Sbjct:   91 RNTTLARDQYGVAYLPGFVGLNNLTSTDYLNVTLHALAHVAPLRDFFLDPTNYAGCKSPLVLAFGEVIRRLWSHDNFKSAVSPHEFLQAVSIASNKRFHVGQQAECIDFMSWLLNSLHVGLGGSKKKKAGTSIIHKTFQGLVHVHTMTRE 240

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A7S2V118_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V118_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.740e-57
Identity = 103/200 (51.50%), Postives = 123/200 (61.50%), Query Frame = 0

Query:    5 QNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVG----------------------------------------------------TVIFQTFQGLVEVKTLTKKK 152
            QN TL+RD YGV+YLPGFVGLNNLKSTDFVNVVL +LAH+ PLRDFF++P NY  S++ LVH FGEV+R++WS  NFKS VSPHEF+Q V+ ASKKRFR G Q+E +DFL WLL+SLH GLGG  ++                                                     TVI Q FQG+V VKTLT+KK
Sbjct:  109 QNTTLARDVYGVSYLPGFVGLNNLKSTDFVNVVLQALAHVTPLRDFFLQPQNYHLSRSQLVHRFGEVMRKMWSKDNFKSCVSPHEFVQEVTVASKKRFRIGQQAECIDFLAWLLHSLHVGLGGHPRLEQAGVMDVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXLRPEDLLGITPPAEGPTVIQQCFQGVVHVKTLTRKK 308

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: X5IAE6_9STRA (Ubiquitin specific peptidase 39 n=1 Tax=Ciliophrys infusionum TaxID=38824 RepID=X5IAE6_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.740e-56
Identity = 92/150 (61.33%), Postives = 117/150 (78.00%), Query Frame = 0

Query:    6 NITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGTVIFQTFQGLVEVKTLTKKKVRV 155
            N TL+RD +GV YLPGF+GLNNLK TD+VNVV+H+LAH+ PLRDFF+   NY++SK+ LVH FGE++R++WS  N+KS VSPHE +Q V+ ASK+RF  G QSE V+FL+WLLNSLH GLGGTRK  ++I + FQG V V T  +K   V
Sbjct:  194 NTTLARDIFGVTYLPGFIGLNNLKKTDYVNVVVHALAHVTPLRDFFLRSQNYENSKSQLVHRFGELMRKIWSKHNYKSCVSPHELVQEVTVASKRRFVIGKQSECVEFLSWLLNSLHFGLGGTRKDKSIIHEVFQGKVRVTTRQRKTAAV 343

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A5D6Y3K6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3K6_9STRA)

HSP 1 Score: 189 bits (481), Expect = 5.540e-55
Identity = 90/153 (58.82%), Postives = 121/153 (79.08%), Query Frame = 0

Query:    5 QNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANY-KDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGTVIFQT-FQGLVEVKTLTKKKVRV 155
            QN  L++D +GV+YLPGF+GLNNLK+TD+VNVV+ +LAHIPPLRDFF++  +    S++ LVH FGE++R++WSP NFK+ +SPHEF+Q VS +SKKRF  G Q+E+V+FL+WLLN LH+GLGG+ K G+ I  T FQG VEV T+ + K  V
Sbjct:  126 QNRILAQDAFGVSYLPGFIGLNNLKNTDYVNVVVQALAHIPPLRDFFLQATDVVASSRSQLVHRFGELLRKMWSPHNFKNTISPHEFVQEVSVSSKKRFHVGTQNESVEFLSWLLNELHRGLGGSSKPGSSIVHTCFQGFVEVTTIDEAKAAV 278

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A067BSI9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSI9_SAPPC)

HSP 1 Score: 187 bits (475), Expect = 3.560e-54
Identity = 87/149 (58.39%), Postives = 118/149 (79.19%), Query Frame = 0

Query:    6 NITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYK----DSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLT 149
            N  L++D +GV+YLPGF+GLNNLK TD+V+VVLH+LAH+PPLRD+F+EPANY      +K+ LV  FGE++R++WSP N K+ +SPHE +Q +S ASKKRF  G Q +A++FL+W LN LH+G+GGTRK G+ +I   FQG V+VKTL+
Sbjct:  127 NRKLAQDSFGVSYLPGFIGLNNLKKTDYVSVVLHALAHVPPLRDYFLEPANYMAAVAKTKSSLVVRFGEMMRKMWSPHNIKNTISPHEIVQEISVASKKRFHIGEQKDALEFLSWFLNELHRGVGGTRKQGSSIIHDVFQGTVQVKTLS 275

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A7S3ZYB1_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYB1_9STRA)

HSP 1 Score: 188 bits (477), Expect = 3.660e-54
Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 0

Query:    8 TLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLTKK 151
            TL+RD +GVAYLPGF GLNNLK TD++NVV+H LAH+ PLRDFF++P NYKD  +PLV  FG ++R++WS  NFKS VSPHE +Q V+ ASK RF+ G  ++A DFL WLLN LH+ LGGT++ G+ +I   FQG + V+TL++K
Sbjct:  192 TLARDVHGVAYLPGFCGLNNLKKTDYINVVVHQLAHVRPLRDFFLDPRNYKDRPSPLVREFGALLRKIWSRDNFKSVVSPHELVQEVTRASKLRFKIGTSADAADFLGWLLNQLHRDLGGTKRPGSSIIHDVFQGSIRVETLSRK 336

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: F0YC17_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC17_AURAN)

HSP 1 Score: 189 bits (479), Expect = 1.400e-52
Identity = 89/145 (61.38%), Postives = 112/145 (77.24%), Query Frame = 0

Query:    8 TLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLTKK 151
            TL+RD +GVAYLPGF GLNNLK TD+VNVV+H+LAH+ PLRDFF+ P NY    APLVH FGE++R++WS  NFKS +SPHE +Q ++ ASK RF+ G  S+A DFL W LN LH+ LGGTRK G+ VI   FQG V V+TL+++
Sbjct:  139 TLARDVHGVAYLPGFCGLNNLKKTDYVNVVVHALAHVAPLRDFFLRPENYAHCPAPLVHKFGELLRKLWSRDNFKSVISPHELVQEITVASKLRFQIGETSDAADFLVWFLNELHRSLGGTRKRGSSVIHDAFQGDVRVETLSRR 283

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A1V9Z9V5_9STRA (U4/U6.U5 tri-snRNP-associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9V5_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.860e-52
Identity = 85/148 (57.43%), Postives = 114/148 (77.03%), Query Frame = 0

Query:    6 NITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPANYKDS----KAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTL 148
            N  L++D +GV+YLPGFVGLNNLK TD+++VVLH+LAH+PPLRD+F+EP NY  +    K+ LV  FGE+IR++WSP N K+ +SPHE +Q +S ASKKRFR G Q + ++FL+W LN LH+G+GGT+  G+ +I Q FQG V V TL
Sbjct:  121 NKKLAQDSFGVSYLPGFVGLNNLKKTDYISVVLHALAHVPPLRDYFLEPVNYMPAVAKTKSVLVVRFGEMIRKMWSPHNIKNTISPHEIVQEISVASKKRFRIGEQKDGLEFLSWFLNELHRGIGGTKTPGSSIIHQVFQGTVRVNTL 268

[Close]

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Match: A0A8K1FFF5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFF5_PYTOL)

HSP 1 Score: 182 bits (462), Expect = 3.650e-52
Identity = 86/150 (57.33%), Postives = 119/150 (79.33%), Query Frame = 0

Query:    5 QNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDFFVEPAN-YKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKKRFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGT-VIFQTFQGLVEVKTLTKKK 152
            +N  L++D +GV+YLPGF+GLNNLK TD++NVV+ +LAH+PPLRDFF+  +N    SK+ LV  FGE++R++WSP NFK+ +SPHEF+Q VS +S KRF  G Q+E+V+FL+WLLN LH+GLGG+ K G+ +I + FQGL+EVKT  + K
Sbjct:  127 ENRLLAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLLSSNTVGKSKSSLVLRFGELLRKMWSPHNFKNTISPHEFVQEVSVSSNKRFHVGQQNESVEFLSWLLNELHRGLGGSHKRGSSIIHKCFQGLIEVKTTDETK 276

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot

BLAST of mRNA_H-elongata_contig69458.14596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JZ76_9PHAE	3.070e-85	84.87	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z9Q1_9STRA	5.710e-64	68.67	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2V118_9STRA	2.740e-57	51.50	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
X5IAE6_9STRA	1.740e-56	61.33	Ubiquitin specific peptidase 39 n=1 Tax=Ciliophrys...	[more]
A0A5D6Y3K6_9STRA	5.540e-55	58.82	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A067BSI9_SAPPC	3.560e-54	58.39	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A7S3ZYB1_9STRA	3.660e-54	59.31	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]
F0YC17_AURAN	1.400e-52	61.38	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]
A0A1V9Z9V5_9STRA	1.860e-52	57.43	U4/U6.U5 tri-snRNP-associated protein n=1 Tax=Achl...	[more]
A0A8K1FFF5_PYTOL	3.650e-52	57.33	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.70.10		coord: 3..155 e-value: 1.8E-36 score: 128.0
None	No IPR available	PANTHER	PTHR21646	FAMILY NOT NAMED	coord: 5..148
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 23..130 e-value: 7.5E-14 score: 51.8
IPR033809	USP39	PANTHER	PTHR21646:SF16	U4/U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 2	coord: 5..148
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 23..157 score: 17.172
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 20..147

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig69458	contig	H-elongata_contig69458:207..3010 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig69458.14596.1	mRNA_H-elongata_contig69458.14596.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig69458 207..3016 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig69458.14596.1 ID=prot_H-elongata_contig69458.14596.1|Name=mRNA_H-elongata_contig69458.14596.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
MCFAQNITLSRDQYGVAYLPGFVGLNNLKSTDFVNVVLHSLAHIPPLRDF
FVEPANYKDSKAPLVHAFGEVIRRVWSPSNFKSAVSPHEFIQAVSYASKK
RFRPGIQSEAVDFLTWLLNSLHQGLGGTRKVGTVIFQTFQGLVEVKTLTK
KKVRVFD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001394	Peptidase_C19_UCH
IPR033809	USP39
IPR028889	USP_dom
IPR038765	Papain-like_cys_pep_sf