prot_H-elongata_contig6942.14592.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6942.14592.1
Unique Nameprot_H-elongata_contig6942.14592.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
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BLAST of mRNA_H-elongata_contig6942.14592.1 vs. uniprot
Match: A0A6H5J864_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J864_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 5.760e-20
Identity = 44/50 (88.00%), Postives = 45/50 (90.00%), Query Frame = 0 
Query:   83 VGAIIAGMINNAGDTGVQHFGCWALANVGWGQPDVQRFAREEGALEVIQV 132
            VGAIIA MINNA DT VQHFGCWALANVGWGQ DVQRFAREEGA+E IQV
Sbjct:  224 VGAIIAAMINNADDTSVQHFGCWALANVGWGQADVQRFAREEGAIEAIQV 273
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BLAST of mRNA_H-elongata_contig6942.14592.1 vs. uniprot
Match: D7FNZ2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ2_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 3.490e-19
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 0 
Query:   83 VGAIIAGMINNAGDTGVQHFGCWALANVGWGQPDVQRFAREEGALEVIQ 131
            VGAIIA MINNA DT VQHFGCWALANVGWGQ DVQRFAREEGA+EVIQ
Sbjct:  732 VGAIIAAMINNADDTSVQHFGCWALANVGWGQADVQRFAREEGAIEVIQ 780
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6942.14592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J864_9PHAE5.760e-2088.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNZ2_ECTSI3.490e-1989.80Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 70..112
e-value: 140.0
score: 4.5
coord: 25..69
e-value: 0.0012
score: 28.2
IPR000225ArmadilloPFAMPF00514Armcoord: 26..68
e-value: 3.2E-5
score: 23.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..134
e-value: 2.4E-23
score: 84.4
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 28..110
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 1..71
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 1..71
IPR040104Armadillo repeat-containing protein 6PANTHERPTHR22895:SF0ARMADILLO REPEAT-CONTAINING PROTEIN 6coord: 28..110
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 7..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6942contigH-elongata_contig6942:4124..5117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6942.14592.1mRNA_H-elongata_contig6942.14592.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6942 4124..5117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6942.14592.1 ID=prot_H-elongata_contig6942.14592.1|Name=mRNA_H-elongata_contig6942.14592.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MAAFPADPELQGESCTAVTNISHNCDRNRMLVAEAGGIVLILDAMQARAF
PGDPKLQRQACWALLTLAANDDISRMIATEGGVGAIIAGMINNAGDTGVQ
HFGCWALANVGWGQPDVQRFAREEGALEVIQVRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR040104ARMC6
IPR016024ARM-type_fold