mRNA_H-elongata_contig69379.14588.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A6H5KNR9_9PHAE (GTP cyclohydrolase II n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNR9_9PHAE) HSP 1 Score: 295 bits (756), Expect = 1.290e-93 Identity = 156/215 (72.56%), Postives = 178/215 (82.79%), Query Frame = 1
Query: 4 IALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAPNAHSLPYLETKASRMRHLLHQIDNVEVTSESLRDGLTSPVALALPLDEVGVIRGGEKANEQQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAEKA 648
+ALD + G +Y + QEGRGIGLANKVAAY LQDGGLDTVDANR+LGFDDD RSYEAV++IL+DMGIKSIKLMTNNPFKLK LK+MGIK+LSRIPMLV PN HSL YL KA RM H+LHQ+D+VE+ SES G T+PVAL PL+EVG IRGGE + + ++EGYAFGRDSVLAAIEAVR GKCVVVTDDE RENEGD++FAAEKA
Sbjct: 253 LALDYISEHGGCVIYMQ-QEGRGIGLANKVAAYALQDGGLDTVDANRHLGFDDDLRSYEAVEHILADMGIKSIKLMTNNPFKLKCLKSMGIKVLSRIPMLVPPNVHSLAYLRAKAHRMSHVLHQLDDVEILSESPSGGATAPVAL--PLNEVGAIRGGESTRGSEEAEPDEEGYAFGRDSVLAAIEAVRSGKCVVVTDDEGRENEGDLVFAAEKA 464
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A835ZPV4_9STRA (GTP cyclohydrolase II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPV4_9STRA) HSP 1 Score: 210 bits (535), Expect = 3.040e-62 Identity = 127/232 (54.74%), Postives = 156/232 (67.24%), Query Frame = 1
Query: 4 IALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAPNAHSLPYLETKASRMRHLLHQIDNVEVTSESLRDGLTSPVALALPLDE-VGVIRGGEKANEQQPE--------------------KDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFA 636
++LD G + +Y + QEGRGIGLANK+AAY LQD GLDTVDANR+LGF+DDYRSYEAV++IL D+G+KS++LMTNNPFKLK LKAMGIK+ +RIPMLVAPN HS YL+ K+ RM HLL D V E+ A A+ D V +RGG A+E E + E E +AFGR++V+AAI+AV EGK VVVTDDE RENEGD+I A
Sbjct: 90 LSLDYIHRHGGIVIYMQ-QEGRGIGLANKIAAYSLQDQGLDTVDANRHLGFEDDYRSYEAVEFILRDLGVKSVQLMTNNPFKLKCLKAMGIKVQARIPMLVAPNPHSERYLQAKSRRMSHLLALDDAEAVVVEAAAXXXXXXXATAVAGDTPVTKLRGG-AASEDGSELCVXXXXXXXXXXXXXXXXGECETETWAFGRETVVAAIKAVGEGKLVVVTDDEDRENEGDLICA 319
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S2UYM8_9STRA (GTP cyclohydrolase II (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYM8_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.520e-47 Identity = 103/227 (45.37%), Postives = 138/227 (60.79%), Query Frame = 1
Query: 22 THPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAPNAHSLPYLETKASRMRHLLHQIDNVEVTSESLRDGLTSPVALALP------------------LDEVGVIRGGEKANEQQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAEKA 648
TH G + +Y + QEGRGIGLANKVAAY LQD G+DTVDANR+LGF+DD RSYEAV IL ++GIKSI+L+TNNP+K++ L +G++I S P++ PN H++ YL KASRM H + + + S+++ GL + L P + + FGR +V AAI+A+R+GK VVV DDE+RENEGD+I AAE A
Sbjct: 169 THGGAI-IYMQ-QEGRGIGLANKVAAYALQDHGMDTVDANRHLGFEDDLRSYEAVPKILKNLGIKSIRLLTNNPYKVQCLSDLGVEIQSTTPIVATPNFHNIDYLRAKASRMSH---RFPPLHLPSDNVSPGLNTTTGLVPPGLAXXXXXXXXXXXPEXXXXXXXXXXXXXXXXXXXXXXASDKNWCFGRHTVEAAIDAIRQGKMVVVVDDENRENEGDLIMAAELA 390
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S2RFL1_9STRA (GTP cyclohydrolase II n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFL1_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.230e-42 Identity = 103/217 (47.47%), Postives = 130/217 (59.91%), Query Frame = 1
Query: 58 QEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAP-NAHSLPYLETKASRMRHL----LHQIDNV------------EVTSESLRDG---LTSPVALALPLDEVGVIRGGEKANEQQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAEKA 648
QEGRGIGLANKVAAY +QD GLDTVDAN +LGF +D R Y V ILSD+GI SIKLMTNNP K+ L ++GI ++ IPM+VA N + YL+TK RM H + +I+ V V E + +G + V +AL +DE GV +++GY FGR SVL A+EA+ G+ VVV DD RENEGD I AA+ A
Sbjct: 146 QEGRGIGLANKVAAYAMQDMGLDTVDANTHLGFPEDCRMYGVVPSILSDLGIDSIKLMTNNPRKIDRLTSLGINVVDTIPMVVAEANDFNRKYLQTKKDRMHHTNFGDMLKIETVFSPEPLPIPLQHPVADEYINEGEEMAATAVVMAL-IDEAGVTA-------------KEDGYCFGRQSVLDAVEAMARGEIVVVVDDMDRENEGDFIMAADLA 348
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S2XMA4_9STRA (GTP cyclohydrolase II (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMA4_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.160e-42 Identity = 101/211 (47.87%), Postives = 131/211 (62.09%), Query Frame = 1
Query: 58 QEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAP-NAHSLPYLETKASRMRH-----LLHQIDNVEVTSESLR--DGLTSPVALALPLDEVG--------VIRGGEKANEQQPEKDEKE-GYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAA 639
QEGRGIGLANK+AAYE+QDGG+DTV+AN +LGF +D R Y V IL+DMGI SI+L+TNNP KL L+A+G+ ++S IPM+V N ++ YLETK +RM H LL ++ + +G SP + + + IR AN+ Q E GY FGR+SV AI A++ G+ VVV DDESRENEGD I AA
Sbjct: 304 QEGRGIGLANKIAAYEMQDGGMDTVEANIHLGFPEDCRQYGVVPGILADMGIDSIQLITNNPRKLHRLRALGVDVVSTIPMVVKEANQYNRKYLETKVNRMNHTNFGDLLAASPTSTLSPADIAKANGSLSPQEKTVADEYINEGEEMAAVAIRTALMANDTQTGVAAAENGYCFGRESVEDAIAAIKRGELVVVVDDESRENEGDFIMAA 514
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S0F7D9_9STRA (GTP cyclohydrolase II n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7S0F7D9_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.830e-41 Identity = 107/232 (46.12%), Postives = 137/232 (59.05%), Query Frame = 1
Query: 4 IALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLV-APNAHSLPYLETKASRMRH--LLHQIDNVEVTSESLRDGLTSPVALALPLDEVGVIRGGEKAN----------EQQPEKDEK------EGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAE 642
+AL H G +Y + QEGRGIGLANKVAAY LQD GLDTVDAN +LGF +D R+Y A+ IL DM I SIKLMTNNP K+ +K +G+K+ + M+V + N ++ YLE K RM H L H D+ + E P+ L+E G GG N E++ ++DE +GY FGR SV AI A R+GK VVV DD +RENEGD+I AA+
Sbjct: 94 MALKHVAHQGGAVIYMQ-QEGRGIGLANKVAAYALQDVGLDTVDANLHLGFPEDCRNYGAIPSILHDMKIGSIKLMTNNPRKISRMKELGVKVDDTVAMVVPSTNPYNHRYLEAKHDRMDHQNLEHLFDDSSSSEEV-------PLVDEAYLNESG---GGMAKNAVEMSLTAFSEEEDDEDEAGCLARDDGYCFGRKSVEDAIAATRDGKMVVVVDDMNRENEGDLIMAAD 314
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A1Z5JTA8_FISSO (GTP cyclohydrolase II n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTA8_FISSO) HSP 1 Score: 155 bits (392), Expect = 1.140e-40 Identity = 104/234 (44.44%), Postives = 139/234 (59.40%), Query Frame = 1
Query: 31 GRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAP-NAHSLPYLETKASRMRH--LLHQIDNVE-------------VTSESLRDGL---TSPVALALPLDE---------VGVIR-GGEKANEQQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAEK 645
G L +Y + QEGRGIGLANKVAAY+LQD G+DTVDAN +LGF +D R Y V IL D+GI+SI+LMTNNP K++ LK G+ + +PM+V N H+ YLE+K RM H L + N E VT E + +G + + ++L ++E VGV G ++ Q +++GY FGR+SV AI A+ G+ VVV DD RENEGD I AA+K
Sbjct: 191 GGLIIYLQ-QEGRGIGLANKVAAYQLQDHGMDTVDANLHLGFPEDLREYSVVPSILEDLGIQSIELMTNNPRKVELLKQAGVDVRGTVPMVVPKTNVHNQKYLESKFHRMHHANLAALVGNDESDVLSRNSNLPLYVTDEYITNGTDLTANAIQVSLLVEEEKAKAIAEAVGVDDIGDDEDGLQGVVASQEDGYCFGRESVEKAIAAIARGEMVVVVDDMDRENEGDFIMAADK 423
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A448YYD7_9STRA (GTP cyclohydrolase II n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYD7_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.490e-40 Identity = 104/222 (46.85%), Postives = 131/222 (59.01%), Query Frame = 1
Query: 4 IALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLV-APNAHSLPYLETKASRMRHLLHQIDNVEVTSESLRDGLTSPVALALPLDEVGVIRGGEKANEQQPEKDEKE--------GYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAE 642
+AL G +Y + QEGRGIGLANKVAAY LQD GLDTVDAN +LGF +D R+Y A+ I DM I SIKLMTNNP K+ LK +G+KI +PM+V N ++ Y+E K RM H D++ SE + V + G+ K + Q+ DE E GY FGR SV+ AI AV+EGK VVV DD +RENEGD+I AA+
Sbjct: 234 MALKHIAEHGGAVIYLQ-QEGRGIGLANKVAAYALQDVGLDTVDANLHLGFPEDCRNYGAIPSIFHDMKIGSIKLMTNNPRKVNRLKELGVKIDGTVPMVVPTTNPYNHRYIEAKHERMAH--ENFDHLFSDSED-----DTIVGETYVTEGEGMAAHAVKQSLQESVDDENEEGCLAKDDGYCFGRQSVVDAIAAVKEGKMVVVVDDMNRENEGDLIMAAD 447
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: K0RI17_THAOC (GTP cyclohydrolase II n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RI17_THAOC) HSP 1 Score: 155 bits (392), Expect = 1.550e-40 Identity = 101/218 (46.33%), Postives = 128/218 (58.72%), Query Frame = 1
Query: 58 QEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLV-APNAHSLPYLETKASRMRH-----LLHQIDNVEVTSES------LRDGLTSPVALALPLDEVGVIRGGEKANE-----------QQPEKDEKEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAE 642
QEGRGIGLANK+AAY LQD GLDTVDAN +LGF +D R+Y V IL DMGI SI+LMTNNP K++ L ++G+ ++ +PM+V N ++ YLETK RMRH +L N ++++ LR+ P PL E + G E A Q +GY FGR SV AI AV G+ +VV DDESRENEGD I AA+
Sbjct: 236 QEGRGIGLANKIAAYSLQDVGLDTVDANTHLGFPEDCRTYGVVPSILKDMGIDSIQLMTNNPRKVERLSSLGVDVVGTVPMVVPTANPYNKKYLETKQKRMRHANFGSMLEASPNAIMSADDSHVEFMLREANVPPEE---PLAEEYINDGEEMAANAVTVALMDDPYQSGVVASDDGYCFGRKSVEEAIAAVARGELIVVVDDESRENEGDFIMAAD 450
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Match: A0A7S2V904_9STRA (GTP cyclohydrolase II n=2 Tax=Naviculales TaxID=38748 RepID=A0A7S2V904_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.680e-40 Identity = 99/218 (45.41%), Postives = 130/218 (59.63%), Query Frame = 1
Query: 58 QEGRGIGLANKVAAYELQDGGLDTVDANRYLGFDDDYRSYEAVKYILSDMGIKSIKLMTNNPFKLKSLKAMGIKILSRIPMLVAPNA-HSLPYLETKASRMRHL-LHQIDNVEVTSESLRDGLTSPVALALPLDEVGVIRGGEKAN----------------EQQPEKDE-----KEGYAFGRDSVLAAIEAVREGKCVVVTDDESRENEGDIIFAAE 642
QEGRGIGLANKVAAY LQDGG+DTVDANR+LGF+DD R Y+ + IL DM I I+LMTNNP K++ L ++G+ + +PM+VA ++ YLETK +RM H L ++ + + T+ DG +S + P V E N E PE +E +GY FGR+SV AI+A+ G+ VVV DD RENEGD I AA+
Sbjct: 192 QEGRGIGLANKVAAYALQDGGMDTVDANRHLGFEDDQREYDILPSILEDMNIGGIQLMTNNPRKVEMLTSVGVNVERTLPMVVAQTTPYNYKYLETKRTRMNHSNLAKLLSQDPTTMP-PDGASSHMMPRRPDSSESVSLAAEYINNGTEMSANAVQVSLMVEDYPEPEEGVKARSDGYCFGRESVEKAIQAMSRGEMVVVVDDMDRENEGDFIMAAD 408 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69379.14588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69379.14588.1 >prot_H-elongata_contig69379.14588.1 ID=prot_H-elongata_contig69379.14588.1|Name=mRNA_H-elongata_contig69379.14588.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=216bp MIALDGSTHPGRLAVYSELQEGRGIGLANKVAAYELQDGGLDTVDANRYLback to top mRNA from alignment at H-elongata_contig69379:569..3147+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69379.14588.1 ID=mRNA_H-elongata_contig69379.14588.1|Name=mRNA_H-elongata_contig69379.14588.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2579bp|location=Sequence derived from alignment at H-elongata_contig69379:569..3147+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69379:569..3147+ >mRNA_H-elongata_contig69379.14588.1 ID=mRNA_H-elongata_contig69379.14588.1|Name=mRNA_H-elongata_contig69379.14588.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1296bp|location=Sequence derived from alignment at H-elongata_contig69379:569..3147+ (Himanthalia elongata Himel1 dioecious)back to top |