prot_H-elongata_contig69304.14578.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69304.14578.1
Unique Nameprot_H-elongata_contig69304.14578.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
BLAST of mRNA_H-elongata_contig69304.14578.1 vs. uniprot
Match: D7FR41_ECTSI (Voltage-gated Ion Channel (VIC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR41_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 2.380e-41
Identity = 70/106 (66.04%), Postives = 83/106 (78.30%), Query Frame = 0
Query:    1 MYNNDALGGRESAACAHDKNSVNALKLVRNKAWNQVLNVCTIFHLALPILEIQRCLPCFGPQKLQTPSGLDSVLVGWRPTPLGSMWLECFLCFLYMYDLYQVYVSR 106
            +Y  DAL GRES  C HD+NS+ ALKLVRNKAWNQ+LN+CTI HL LPI+EIQRCLPC G QK+      +S+  GWRPT LGSMWLEC LC LY+YDLY+V ++R
Sbjct:   79 IYVKDALAGRESPTCIHDQNSLRALKLVRNKAWNQLLNICTIAHLMLPIVEIQRCLPCMGMQKIPESLDSNSLHTGWRPTLLGSMWLECLLCLLYVYDLYKVALAR 184          
BLAST of mRNA_H-elongata_contig69304.14578.1 vs. uniprot
Match: A0A6H5L0T6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0T6_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 5.360e-40
Identity = 68/102 (66.67%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    1 MYNNDALGGRESAACAHDKNSVNALKLVRNKAWNQVLNVCTIFHLALPILEIQRCLPCFGPQKLQTPSGLDSVLVGWRPTPLGSMWLECFLCFLYMYDLYQV 102
            +Y  DAL GRES  C H++NS+ ALKLVRNKAWNQ+LN+CTI HL LPI+EIQRCLPC G QK+      +S+  GWRPT LGSMWLEC LC LY+YDLY+V
Sbjct:  141 IYVKDALAGRESPTCMHNQNSLRALKLVRNKAWNQLLNICTIVHLMLPIVEIQRCLPCMGMQKIPESLDSNSLHTGWRPTLLGSMWLECLLCLLYVYDLYKV 242          
BLAST of mRNA_H-elongata_contig69304.14578.1 vs. uniprot
Match: D7FGS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGS0_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 9.750e-32
Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 0
Query:    2 YNNDALGGRESAACAHDKNSVNALKLVRNKAWNQVLNVCTIFHLALPILEIQRCLPCFGPQKLQTPSGLDSVLVGWRPTPLGSMWLECFLCFLYMYDLYQVYVSR 106
            Y  DAL GR+S+AC H++ S+ ALK  RN AWN +LN+CT+ HL LP++EIQRCL C GP +       +++ +GWRPT LGS+W+EC LC  Y   L Q  +SR
Sbjct:  126 YVRDALAGRDSSACIHNERSIRALKWFRNDAWNSLLNICTLVHLILPMVEIQRCLSCMGPHRRSASLEDNTLFLGWRPTSLGSLWIECVLCVFYTCHLRQEALSR 230          
BLAST of mRNA_H-elongata_contig69304.14578.1 vs. uniprot
Match: A0A6H5JGA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGA6_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.990e-22
Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    1 MYNNDALGGRESAACAHDKNSVNALKLVRNKAWNQVLNVCTIFHLALPILEIQRCLPCFGPQKLQTPSGLDSVLVGWRP 79
            +Y  DAL GR+S+AC H++ S+ ALK  RN AWN +LNVCT+ HL LP++EIQRCL C GP K       +++ +G RP
Sbjct:   21 IYVRDALAGRDSSACIHNERSIRALKCFRNDAWNSLLNVCTLVHLTLPMVEIQRCLSCVGPHKRSASLEDNTLFLGIRP 99          
BLAST of mRNA_H-elongata_contig69304.14578.1 vs. uniprot
Match: A0A836CJB1_9STRA (Ion_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.810e-7
Identity = 35/111 (31.53%), Postives = 59/111 (53.15%), Query Frame = 0
Query:    5 DALGGRESAACAHDKNSVNALKLVRNKAWNQVLNVCTIFHLALPILEIQRCLPCF-GPQKLQTPSGL------DSV--LVGWRPTPLGSMWLECFLCFLYMYDLYQVYVSR 106
            DA+ GR+  A  H +  ++A++L R +    + NV   F L LP++E+     C  G  +     G+      DS+   VGWRPT LGS WLE  +C  +++++  +++ R
Sbjct:  151 DAMHGRKIIAHIHTQRQLSAVRLARARPIILIFNVLCFFQLLLPLIEMPMGWECREGAVRSIQDGGVLCELDGDSLAWFVGWRPTMLGSSWLELPICAFFLFEIALLFMIR 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69304.14578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FR41_ECTSI2.380e-4166.04Voltage-gated Ion Channel (VIC) Superfamily n=1 Ta... [more]
A0A6H5L0T6_9PHAE5.360e-4066.67Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FGS0_ECTSI9.750e-3251.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGA6_9PHAE1.990e-2251.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CJB1_9STRA1.810e-731.53Ion_trans domain-containing protein n=1 Tax=Tribon... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69304contigH-elongata_contig69304:1762..3007 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69304.14578.1mRNA_H-elongata_contig69304.14578.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69304 1756..3007 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69304.14578.1 ID=prot_H-elongata_contig69304.14578.1|Name=mRNA_H-elongata_contig69304.14578.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MYNNDALGGRESAACAHDKNSVNALKLVRNKAWNQVLNVCTIFHLALPIL
EIQRCLPCFGPQKLQTPSGLDSVLVGWRPTPLGSMWLECFLCFLYMYDLY
QVYVSR
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