mRNA_H-elongata_contig69290.14575.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: D7G8D4_ECTSI (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8D4_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 8.810e-22 Identity = 48/68 (70.59%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 RVFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVGHAD 204
RVFIAAC +SVFVR+C GC FTVACKQLRT KTEPIIETS MTFAPFNGAYVGHA+
Sbjct: 74 RVFIAACVDSVFVRNCTGCVFTVACKQLRTRDCEDCEFRLYCKTEPIIETSHGMTFAPFNGAYVGHAE 141
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: A0A6H5K9W1_9PHAE (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9W1_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 4.160e-21 Identity = 47/67 (70.15%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 4 VFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVGHAD 204
VFIAAC +SVFVR+C GC FTVACKQLRT KTEPIIETS MTFAPFNGAYVGHA+
Sbjct: 16 VFIAACVDSVFVRNCTGCVFTVACKQLRTRDCEDCEFRLYCKTEPIIETSHGMTFAPFNGAYVGHAE 82
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: A0A836CLR1_9STRA (Tubulin binding cofactor C-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 6.750e-20 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 RVFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVGHA 201
RVF+AACAES+FVR+C+GC F ACKQLRT KTEPIIETS+ M F PFNGAY HA
Sbjct: 76 RVFVAACAESLFVRNCSGCTFYAACKQLRTRDCQNCLFSLYSKTEPIIETSSGMKFGPFNGAYADHA 142
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: A0A7S2K3P5_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3P5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 7.390e-17 Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 1 RVFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVGH 198
RVFIAA +ESVF+R+C+ C FT+ACKQ RT KTEP IETS + FAPFNGAY GH
Sbjct: 76 RVFIAASSESVFIRNCSSCTFTIACKQFRTRDCTNCIFYLYSKTEPAIETSNNIRFAPFNGAYDGH 141
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: K3WZP0_GLOUD (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZP0_GLOUD) HSP 1 Score: 79.7 bits (195), Expect = 5.800e-16 Identity = 40/65 (61.54%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1 RVFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVG 195
RVFI C+ESVFVR+C C FTVACKQLRT T+PIIETS +M FAPFNGAY G
Sbjct: 77 RVFIGPCSESVFVRNCTNCVFTVACKQLRTRDSSQCSFYLYSLTDPIIETSKQMQFAPFNGAYNG 141
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: A0A7S1C1T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C1T6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 6.210e-16 Identity = 43/68 (63.24%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 1 RVFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVGHAD 204
+VFI ESVFVRDC+ FT+ACKQLRTXXX +T+PIIETSTRM FAPFNGAY G D
Sbjct: 64 KVFIGPSCESVFVRDCSDTVFTIACKQLRTXXXSNCTFFLYSQTDPIIETSTRMRFAPFNGAYPGIED 131
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: D0NPG8_PHYIT (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NPG8_PHYIT) HSP 1 Score: 78.6 bits (192), Expect = 1.390e-15 Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 1 RVFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVG 195
RVF+ +ESVFVR+C+ C FT+ACKQLRT T+PIIETS +MTFAPFNGAY G
Sbjct: 76 RVFVGPSSESVFVRNCSNCVFTIACKQLRTRDCSGCSIYLYSLTDPIIETSQQMTFAPFNGAYCG 140
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: A0A3R7JQW2_9STRA (C-CAP/cofactor C-like domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JQW2_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.550e-15 Identity = 37/65 (56.92%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 1 RVFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVG 195
RVFI +ESVF+R+C C FT+ACKQLRT T+PIIETS +M FAPFNGAY G
Sbjct: 76 RVFIGPSSESVFLRNCTNCTFTIACKQLRTRDCSGCSTYLYSLTDPIIETSQQMQFAPFNGAYCG 140
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: D0N6N9_PHYIT (Palmitoyltransferase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N6N9_PHYIT) HSP 1 Score: 78.6 bits (192), Expect = 1.990e-15 Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 1 RVFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVG 195
RVF+ +ESVFVR+C+ C FT+ACKQLRT T+PIIETS +MTFAPFNGAY G
Sbjct: 76 RVFVGPSSESVFVRNCSNCVFTIACKQLRTRDCSGCSIYLYSLTDPIIETSQQMTFAPFNGAYCG 140
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Match: H3GSA8_PHYRM (Dolichyl-phosphate beta-glucosyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSA8_PHYRM) HSP 1 Score: 78.2 bits (191), Expect = 2.740e-15 Identity = 38/65 (58.46%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1 RVFIAACAESVFVRDCAGCRFTVACKQLRTXXXXXXXXXXXXKTEPIIETSTRMTFAPFNGAYVG 195
RVF+ +ESVFVR+C C FT+ACKQLRT T+PIIETS +MTFAPFNGAY G
Sbjct: 76 RVFVGPSSESVFVRNCTNCVFTIACKQLRTRDCSGCNIYLYSLTDPIIETSQQMTFAPFNGAYCG 140 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69290.14575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig69290.14575.1 >prot_H-elongata_contig69290.14575.1 ID=prot_H-elongata_contig69290.14575.1|Name=mRNA_H-elongata_contig69290.14575.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp RVFIAACAESVFVRDCAGCRFTVACKQLRTRDCVDCEFRLYCKTEPIIETback to top mRNA from alignment at H-elongata_contig69290:2391..2594- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig69290.14575.1 ID=mRNA_H-elongata_contig69290.14575.1|Name=mRNA_H-elongata_contig69290.14575.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=204bp|location=Sequence derived from alignment at H-elongata_contig69290:2391..2594- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig69290:2391..2594- >mRNA_H-elongata_contig69290.14575.1 ID=mRNA_H-elongata_contig69290.14575.1|Name=mRNA_H-elongata_contig69290.14575.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=408bp|location=Sequence derived from alignment at H-elongata_contig69290:2391..2594- (Himanthalia elongata Himel1 dioecious)back to top |