prot_H-elongata_contig69216.14571.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69216.14571.1
Unique Nameprot_H-elongata_contig69216.14571.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
BLAST of mRNA_H-elongata_contig69216.14571.1 vs. uniprot
Match: D8LTT7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT7_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 6.470e-13
Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MVDGVDSLECDMPGVTLVTIPLAAGYWRGDVNSTNVEPCLLDDACKGGRG 50
            M DG DSLEC +PGVTL T+PLA GYWRGD+  T +  C    AC GG G
Sbjct:  988 MADGEDSLECSVPGVTLDTLPLAEGYWRGDITQTYIRECWNPSACAGGTG 1037          
BLAST of mRNA_H-elongata_contig69216.14571.1 vs. uniprot
Match: A0A6H5JUJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ2_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 3.750e-11
Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    1 MVDGVDSLECDMPGVTLVTIPLAAGYWRGDVNSTNVEPCLLDDACKGGRG 50
            M DG  SL+C  PG+TL T+PLA GYWRGD+  T +  C    AC GG G
Sbjct:  992 MADGEGSLDCSAPGITLDTLPLAEGYWRGDITQTYIRKCWNPSACAGGTG 1041          
BLAST of mRNA_H-elongata_contig69216.14571.1 vs. uniprot
Match: A0A835YMX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMX7_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 3.610e-5
Identity = 20/43 (46.51%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    8 LECDMPGVTLVTIPLAAGYWRGDVN--STNVEPCLLDDACKGG 48
            L+C +PGVT+ T+PL  G+WRG++     ++ PC   DAC GG
Sbjct:  826 LDCQVPGVTIKTLPLRKGWWRGNLTLAQADILPCWNADACIGG 868          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69216.14571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTT7_ECTSI6.470e-1360.00Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5JUJ2_9PHAE3.750e-1154.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YMX7_9STRA3.610e-546.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69216contigH-elongata_contig69216:1318..1777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69216.14571.1mRNA_H-elongata_contig69216.14571.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69216 1318..1783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69216.14571.1 ID=prot_H-elongata_contig69216.14571.1|Name=mRNA_H-elongata_contig69216.14571.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MVDGVDSLECDMPGVTLVTIPLAAGYWRGDVNSTNVEPCLLDDACKGGRG
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