prot_H-elongata_contig69200.14569.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69200.14569.1
Unique Nameprot_H-elongata_contig69200.14569.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: A0A835YQR3_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQR3_9STRA)

HSP 1 Score: 120 bits (300), Expect = 5.910e-31
Identity = 62/106 (58.49%), Postives = 72/106 (67.92%), Query Frame = 0
Query:    1 PHSALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRVQMPDGIPFVTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEVRDYPSN 106
            PH  LPVEIIQ+   HIRRQ+E LPSL+GCK  LR+      P+VTDNGNYI DL+F  PI +P  AA E+S  VGVVEHGLFL MAS  +IA + GV     P N
Sbjct:  186 PHFDLPVEIIQFCQTHIRRQIEGLPSLKGCKANLRM------PYVTDNGNYIADLKFDAPIADPSQAAAELSDTVGVVEHGLFLDMASVCIIAGKDGVTTTHAPGN 285          
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: A0A836CI02_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI02_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.580e-30
Identity = 58/101 (57.43%), Postives = 74/101 (73.27%), Query Frame = 0
Query:    1 PHSALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRVQMPDGIPFVTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEVR 101
            PH  LPVEIIQ+ H+HIRR++E LPSL+GCK  LR  M    P+VTDN NYIVD +F  PI +P  A  E+ +VVGVVEHGLFLGM ++ +IA + G+ V+
Sbjct:  176 PHFDLPVEIIQFCHEHIRREVENLPSLKGCKAVLR--MSGDKPYVTDNANYIVDCKFDTPIKDPVQAGAELLNVVGVVEHGLFLGMTTACIIAGKDGISVK 274          
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: E8Z6X5_PROMN (Ribose-5-phosphate isomerase (Fragment) n=1 Tax=Prorocentrum minimum TaxID=39449 RepID=E8Z6X5_PROMN)

HSP 1 Score: 107 bits (267), Expect = 6.180e-27
Identity = 52/111 (46.85%), Postives = 74/111 (66.67%), Query Frame = 0
Query:    1 PHSALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRV-----QMPDGI-PFVTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEVRDYPS 105
            P   +PVEI+ + H+H  R + +LP+L+GCK  LR+       PDG  P VTDNGNYIVDL F DPI +P  A +++   VGVV+HGLF GM ++++IA   G+ V++ P+
Sbjct:   81 PGFPVPVEIVPFCHEHTMRVIAQLPALKGCKPVLRLGDCSNNKPDGEDPAVTDNGNYIVDLEFTDPIKDPVAAGQQLMRTVGVVDHGLFTGMTTAVIIAGADGISVKEAPA 191          
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: A0A7S3H468_9STRA (Ribose-5-phosphate isomerase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H468_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.440e-25
Identity = 52/106 (49.06%), Postives = 71/106 (66.98%), Query Frame = 0
Query:    1 PHSALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRV-----QMPDGIPF-VTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEV 100
            P   LPVEI  + H+H RR +E LPS++GCK  LR+       PDG    VTDNGNYIVDL F +PI + ++AA E+   VGVVEHG+F GM +++++A + G+ V
Sbjct:  178 PGFPLPVEITPFCHEHTRRVIENLPSVKGCKAVLRMGSAANNKPDGDNIAVTDNGNYIVDLFFTEPIKDVELAANELKKTVGVVEHGIFEGMTTAVIVAGKSGIRV 283          
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: A0A7S1WNQ4_ALECA (Ribose-5-phosphate isomerase n=2 Tax=Sar TaxID=2698737 RepID=A0A7S1WNQ4_ALECA)

HSP 1 Score: 101 bits (252), Expect = 2.670e-24
Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 0
Query:    1 PHSALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRV-----QMPDGI-PFVTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEVRD 102
            P   +PVEI+ + H+H  R++ +LP+L GC+  LR+       PDG  P VTDNGNYIVDL+F  PI +P  A  ++ S VGVV+HGLF G+ ++ +IA   G+ V++
Sbjct:  133 PGFPVPVEIVPFCHEHTMRKIAELPALAGCEPVLRLGNVANNQPDGDEPAVTDNGNYIVDLKFTSPIKDPVAAGEQLKSTVGVVDHGLFTGITTACIIAGSDGISVKE 240          
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: A0A812PVM2_9DINO (Ribose-5-phosphate isomerase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812PVM2_9DINO)

HSP 1 Score: 102 bits (255), Expect = 4.000e-24
Identity = 50/108 (46.30%), Postives = 72/108 (66.67%), Query Frame = 0
Query:    1 PHSALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRV-----QMPDGI-PFVTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEVRD 102
            P   +PVEI+ + H+H  R++  LP+L+GC+  LR+       PDG  P VTDNGNYIVDL+F  PI +P  A  ++ + VGVV+HGLF GM ++ +IA + G+ V+D
Sbjct:  211 PGFPVPVEIVPFCHEHTMRKIASLPALKGCEPVLRLGNVANNQPDGDEPAVTDNGNYIVDLKFTSPISDPVAAGEQLKATVGVVDHGLFTGMTTACIIAGKEGIIVKD 318          
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: A0A6T6DAD6_9RHOD (Ribose-5-phosphate isomerase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6DAD6_9RHOD)

HSP 1 Score: 102 bits (254), Expect = 4.030e-24
Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 0
Query:    4 ALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRVQMPDGIPFVTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEVR 101
            A+PVEI  +   H   +L   P+L GC   LR+   +G P+VTDN NYIVDL F  PI +P  AA EI+S+VG+VEHGLFL M ++ +IAK GG+EV+
Sbjct:  200 AMPVEITPFCWQHSLNRLLNAPTLAGCTAKLRMDA-NGNPYVTDNDNYIVDLYFDTPIKDPKAAAEEINSMVGIVEHGLFLDMTTACIIAKSGGIEVK 296          
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: A0A7S2FHL7_9STRA (Ribose-5-phosphate isomerase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHL7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.050e-23
Identity = 54/105 (51.43%), Postives = 70/105 (66.67%), Query Frame = 0
Query:    1 PHSALPVEIIQYSHDHIRRQLEKLPSLQG-CKTALRV-----QMPDGI-PFVTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGV 98
            P   +PVE++ + + HI RQ+  LPSL+G C   LR+       PDG  P VTDNGNYIVDL F  P+V P +AA E+ +VVGVVEHGLF GMA  +++A + GV
Sbjct:  130 PGFPVPVEVVPFCYLHIMRQIADLPSLKGRCSPTLRLGSSSNNKPDGDQPAVTDNGNYIVDLVFSKPLVKPALAASELKTVVGVVEHGLFCGMADEVLVAGKQGV 234          
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: A0A2I0BB16_9ASPA (Ribose-5-phosphate isomerase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0BB16_9ASPA)

HSP 1 Score: 100 bits (250), Expect = 1.200e-23
Identity = 48/102 (47.06%), Postives = 73/102 (71.57%), Query Frame = 0
Query:    4 ALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRVQMPDGIPFVTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEVRDYPS 105
            A+PVE++Q+   + + +L++L   +GC+  LR+   DG P+VTDN NYIVDL F+ PI + ++A  EIS + GVVEHGLFL MA++++IA + GV ++D  S
Sbjct:  181 AMPVEVVQFCWKYNQTRLQELFKEEGCEAKLRLDS-DGNPYVTDNSNYIVDLYFKTPITDANVAGNEISDLQGVVEHGLFLDMATAVIIAGKEGVSIKDKVS 281          
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Match: A0A482SU09_9ARCH (Ribose-5-phosphate isomerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SU09_9ARCH)

HSP 1 Score: 99.4 bits (246), Expect = 1.510e-23
Identity = 51/106 (48.11%), Postives = 69/106 (65.09%), Query Frame = 0
Query:    1 PHSALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRV-----QMPDGIPF-VTDNGNYIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEV 100
            PH  LPVEI  + H+H  R ++ LPSL GCK  LR+        DG    +TDNGNYIVDL F  PI +   AA+E+ + VGVVEHGLF+ MA+++++A + G+ V
Sbjct:  111 PHFPLPVEITPFCHEHTLRVIQSLPSLTGCKAVLRMGNVANNKKDGDNIAITDNGNYIVDLYFTAPIRDVQQAAKELKNTVGVVEHGLFVKMATAVIVAGKDGIRV 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69200.14569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQR3_9STRA5.910e-3158.49Ribose-5-phosphate isomerase n=1 Tax=Tribonema min... [more]
A0A836CI02_9STRA1.580e-3057.43Ribose-5-phosphate isomerase n=1 Tax=Tribonema min... [more]
E8Z6X5_PROMN6.180e-2746.85Ribose-5-phosphate isomerase (Fragment) n=1 Tax=Pr... [more]
A0A7S3H468_9STRA3.440e-2549.06Ribose-5-phosphate isomerase (Fragment) n=1 Tax=Sp... [more]
A0A7S1WNQ4_ALECA2.670e-2445.37Ribose-5-phosphate isomerase n=2 Tax=Sar TaxID=269... [more]
A0A812PVM2_9DINO4.000e-2446.30Ribose-5-phosphate isomerase n=4 Tax=Symbiodinium ... [more]
A0A6T6DAD6_9RHOD4.030e-2452.04Ribose-5-phosphate isomerase n=1 Tax=Compsopogon c... [more]
A0A7S2FHL7_9STRA1.050e-2351.43Ribose-5-phosphate isomerase n=1 Tax=Florenciella ... [more]
A0A2I0BB16_9ASPA1.200e-2347.06Ribose-5-phosphate isomerase n=1 Tax=Apostasia she... [more]
A0A482SU09_9ARCH1.510e-2348.11Ribose-5-phosphate isomerase n=1 Tax=archaeon TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004788Ribose 5-phosphate isomerase, type APFAMPF06026Rib_5-P_isom_Acoord: 4..97
e-value: 2.6E-24
score: 85.7
NoneNo IPR availableGENE3D3.30.70.260coord: 1..72
e-value: 1.2E-18
score: 68.8
NoneNo IPR availablePANTHERPTHR43748FAMILY NOT NAMEDcoord: 3..101
NoneNo IPR availablePANTHERPTHR43748:SF3RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATEDcoord: 3..101
NoneNo IPR availableSUPERFAMILY75445D-ribose-5-phosphate isomerase (RpiA), lid domaincoord: 4..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69200contigH-elongata_contig69200:294..1150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69200.14569.1mRNA_H-elongata_contig69200.14569.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69200 294..1150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69200.14569.1 ID=prot_H-elongata_contig69200.14569.1|Name=mRNA_H-elongata_contig69200.14569.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
PHSALPVEIIQYSHDHIRRQLEKLPSLQGCKTALRVQMPDGIPFVTDNGN
YIVDLRFRDPIVNPDIAAREISSVVGVVEHGLFLGMASSIVIAKEGGVEV
RDYPSNRSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004788Ribose5P_isomerase_typA