prot_H-elongata_contig69086.14553.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69086.14553.1
Unique Nameprot_H-elongata_contig69086.14553.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length110
Homology
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: D7FVW1_ECTSI (Ribosomal RNA-processing protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW1_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 3.430e-63
Identity = 94/110 (85.45%), Postives = 102/110 (92.73%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLGKYPNARVADFGCGEARLAASVPNKVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YHRGFR+QVEKWPVHPLDIII WL KYP ARVADFGCGEARLAA+VPNKVHSFDLVSP+P V ACDMA+VP+KDASV+V VFCLSLMGTNLADFLREAHRVL+ GG +KV
Sbjct:   96 YHRGFREQVEKWPVHPLDIIIDWLKKYPKARVADFGCGEARLAATVPNKVHSFDLVSPNPLVTACDMANVPIKDASVHVAVFCLSLMGTNLADFLREAHRVLVPGGLVKV 205          
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: A0A6H5KX03_9PHAE (Ribosomal RNA-processing protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX03_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 6.990e-61
Identity = 93/110 (84.55%), Postives = 102/110 (92.73%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLGKYPNARVADFGCGEARLAASVPNKVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YHRGFR+QVEKWPVHPLDIII WL KYP ARVADFGCGEARLAA+VPNKVHSFDLVSP+P V ACDMA+VP+KDASV+V +FCLSLMGTNLADFLREAHRVL+ GG +KV
Sbjct:  354 YHRGFREQVEKWPVHPLDIIIDWLKKYPKARVADFGCGEARLAATVPNKVHSFDLVSPNPLVTACDMANVPIKDASVHVAIFCLSLMGTNLADFLREAHRVLVPGGLVKV 463          
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: A0A836C7W6_9STRA (Ribosomal RNA-processing protein 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7W6_9STRA)

HSP 1 Score: 184 bits (468), Expect = 4.200e-57
Identity = 83/110 (75.45%), Postives = 94/110 (85.45%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLGKYPNARVADFGCGEARLAASVPNKVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YHRGFR+QVEKWPVHPLD+II WL KYP A +ADFGCGEARLA +VPN+ HSFDL +P+  V ACDMAHVPL DASV++ VFCLSLMGTNLADF+REA RVL  GG +KV
Sbjct:   46 YHRGFREQVEKWPVHPLDVIIRWLKKYPKAVIADFGCGEARLAQTVPNRCHSFDLCAPNAHVTACDMAHVPLPDASVHIAVFCLSLMGTNLADFVREARRVLKPGGLVKV 155          
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: A0A024G7I7_9STRA (Ribosomal RNA-processing protein 8 n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G7I7_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.120e-48
Identity = 68/110 (61.82%), Postives = 94/110 (85.45%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLGKYPNARVADFGCGEARLAASVPNKVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YH+GFR+QV KWP++PLDI I ++ K+PNA VADFGCGEARLA SVPN+VHSFDLV+P+  V+AC++AHVPL   S+++ ++CL+LMGT + ++LREAHRV+ +GG +K+
Sbjct:  101 YHQGFREQVTKWPINPLDIFIDYIKKHPNAVVADFGCGEARLAQSVPNRVHSFDLVAPNDHVVACNIAHVPLNSKSIDIAIYCLALMGTTIPEYLREAHRVMKAGGILKI 210          
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: L1JVI9_GUITC (Ribosomal RNA-processing protein 8 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JVI9_GUITC)

HSP 1 Score: 161 bits (407), Expect = 5.920e-48
Identity = 68/110 (61.82%), Postives = 92/110 (83.64%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLGKYPNARVADFGCGEARLAASVPNKVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YH GFR+Q +KWPV+P+++II +L KYP  +VAD GCG+A++A ++PNKVHSFDL+S  P V+ACD+AHVPLKD+SVN VV  L+LMGTN  DFL+EAHR+++ GG++ V
Sbjct:   41 YHEGFREQTKKWPVNPVNVIIKYLKKYPKWKVADLGCGDAQIAKTLPNKVHSFDLISKDPCVVACDIAHVPLKDSSVNAVVLSLALMGTNYVDFLKEAHRIVVKGGKVLV 150          
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: A0A7S3MDF6_9STRA (Ribosomal RNA-processing protein 8 (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDF6_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.920e-46
Identity = 74/111 (66.67%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLG-KYPNARVADFGCGEARLAASVPNKVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YH GFR+Q   WP +PLD II W+  K+  A VAD GCG+ARLAASVPN VHSFDLVS +PRV+ACD+A VPLKD SV++VVFCL+LMGTN+ADF+REAHR+L   G ++V
Sbjct:   98 YHTGFREQCSYWPYNPLDGIIKWISTKHRKAVVADMGCGDARLAASVPNTVHSFDLVSNNPRVVACDIADVPLKDQSVDIVVFCLALMGTNIADFVREAHRILKPHGIMRV 208          
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: UPI0008744A7C (ribosomal RNA-processing protein 8 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI0008744A7C)

HSP 1 Score: 156 bits (394), Expect = 2.370e-43
Identity = 74/111 (66.67%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLGKYPNAR-VADFGCGEARLAASVPNKVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YH G+R QV+ WP++PLDIII  + K P    VADFGCGEA+LA SVP KVHSFDLV+ HP +IACDMA VPLK+AS++VVVFCLSLMGTN+ D+L EA+RVL  GG +K+
Sbjct:  301 YHEGYRQQVKAWPMNPLDIIIKAIKKMPKTHIVADFGCGEAKLAKSVPQKVHSFDLVAIHPIIIACDMAKVPLKEASIDVVVFCLSLMGTNIHDYLLEANRVLKLGGIMKI 411          
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: A0A482SLV7_9ARCH (Methyltransferase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLV7_9ARCH)

HSP 1 Score: 151 bits (381), Expect = 3.140e-43
Identity = 69/111 (62.16%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLGKY-PNARVADFGCGEARLAASVPNKVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YH G+R+Q  +WP++PLD+II W+ ++  +A VAD GCGEARLAASV N VHSFDLV+ +  V ACD+AHVPL + +V++VVFCLSLMGTNL DF++EAHR+L  GG +KV
Sbjct:  140 YHSGYREQAAQWPINPLDLIIHWIQRHHSSAVVADMGCGEARLAASVRNTVHSFDLVAANASVTACDIAHVPLFNNTVDIVVFCLSLMGTNLVDFVKEAHRILKVGGLLKV 250          
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: UPI001C713735 (ribosomal RNA-processing protein 8-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C713735)

HSP 1 Score: 149 bits (375), Expect = 4.290e-43
Identity = 71/112 (63.39%), Postives = 90/112 (80.36%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLGKYPNARV-ADFGCGEARLAASVPN-KVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YH G+++QVE+WP++PL++II WL K P   + ADFGCG+A+L+ SVP  KVHSFDLV+ + RV ACDMAH PLK  SV+VVVFCLSLMGTN+ DF+ EA+RVL  GG +KV
Sbjct:   39 YHVGYQNQVEQWPINPLNVIITWLKKQPKDWIIADFGCGDAKLSMSVPQTKVHSFDLVAANNRVTACDMAHTPLKPGSVDVVVFCLSLMGTNIKDFIIEANRVLKKGGIMKV 150          
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Match: A0A3M6V8R3_9STRA (Ribosomal RNA-processing protein 8 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8R3_9STRA)

HSP 1 Score: 150 bits (380), Expect = 4.680e-43
Identity = 66/110 (60.00%), Postives = 88/110 (80.00%), Query Frame = 0
Query:    1 YHRGFRDQVEKWPVHPLDIIIGWLGKYPNARVADFGCGEARLAASVPNKVHSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHRVLMSGGRIKV 110
            YH+GFR+  +KWP +PLD  I ++ +YP A VADFGCG+ARL+ SVPNKVHSFDLVS  P V AC++A VPLKD+SV++ V+CL+LMGT++ +++RE HRVL  GG + V
Sbjct:  105 YHQGFREMADKWPTNPLDNFIDYVKRYPKAVVADFGCGDARLSESVPNKVHSFDLVSCKPHVTACNIADVPLKDSSVDIGVYCLALMGTSVREYIREVHRVLKPGGILMV 214          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69086.14553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVW1_ECTSI3.430e-6385.45Ribosomal RNA-processing protein 8 n=1 Tax=Ectocar... [more]
A0A6H5KX03_9PHAE6.990e-6184.55Ribosomal RNA-processing protein 8 n=1 Tax=Ectocar... [more]
A0A836C7W6_9STRA4.200e-5775.45Ribosomal RNA-processing protein 8 n=1 Tax=Tribone... [more]
A0A024G7I7_9STRA1.120e-4861.82Ribosomal RNA-processing protein 8 n=2 Tax=Albugo ... [more]
L1JVI9_GUITC5.920e-4861.82Ribosomal RNA-processing protein 8 n=1 Tax=Guillar... [more]
A0A7S3MDF6_9STRA4.920e-4666.67Ribosomal RNA-processing protein 8 (Fragment) n=2 ... [more]
UPI0008744A7C2.370e-4366.67ribosomal RNA-processing protein 8 n=1 Tax=Anoplop... [more]
A0A482SLV7_9ARCH3.140e-4362.16Methyltransferase domain-containing protein n=1 Ta... [more]
UPI001C7137354.290e-4363.39ribosomal RNA-processing protein 8-like n=1 Tax=Pe... [more]
A0A3M6V8R3_9STRA4.680e-4360.00Ribosomal RNA-processing protein 8 n=2 Tax=Peronos... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 15..110
e-value: 1.1E-35
score: 125.0
IPR007823Ribosomal RNA processing protein 8PFAMPF05148Methyltransf_8coord: 1..110
e-value: 7.1E-47
score: 160.1
IPR007823Ribosomal RNA processing protein 8PANTHERPTHR12787UNCHARACTERIZEDcoord: 1..110
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 4..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69086contigH-elongata_contig69086:2310..2961 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69086.14553.1mRNA_H-elongata_contig69086.14553.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69086 2310..2961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69086.14553.1 ID=prot_H-elongata_contig69086.14553.1|Name=mRNA_H-elongata_contig69086.14553.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
YHRGFRDQVEKWPVHPLDIIIGWLGKYPNARVADFGCGEARLAASVPNKV
HSFDLVSPHPRVIACDMAHVPLKDASVNVVVFCLSLMGTNLADFLREAHR
VLMSGGRIKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007823RRP8
IPR029063SAM-dependent_MTases