prot_H-elongata_contig69011.14544.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69011.14544.1
Unique Nameprot_H-elongata_contig69011.14544.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
[Close]
BLAST of mRNA_H-elongata_contig69011.14544.1 vs. uniprot
Match: D7G4J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J5_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.590e-9
Identity = 35/55 (63.64%), Postives = 35/55 (63.64%), Query Frame = 0 
Query:    1 MEKVGDMLEAAAETAIPAAPVNGGVKRPRRTPA-----WEHWDAVALGEFMVEEA 50
            MEK GDMLEAAAETAIPAAP  GGV    R        WE WDA  L EFM EEA
Sbjct:  450 MEKFGDMLEAAAETAIPAAPGGGGVGYGSRAATAGPREWEQWDAPLLLEFMKEEA 504
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69011.14544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4J5_ECTSI1.590e-963.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69011contigH-elongata_contig69011:693..842 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69011.14544.1mRNA_H-elongata_contig69011.14544.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69011 693..851 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69011.14544.1 ID=prot_H-elongata_contig69011.14544.1|Name=mRNA_H-elongata_contig69011.14544.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MEKVGDMLEAAAETAIPAAPVNGGVKRPRRTPAWEHWDAVALGEFMVEEA
back to top