prot_H-elongata_contig69000.14543.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: A0A0A9Y7J8_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Y7J8_LYGHE) HSP 1 Score: 107 bits (267), Expect = 1.050e-26 Identity = 54/134 (40.30%), Postives = 84/134 (62.69%), Query Frame = 0
Query: 10 WQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQASIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAY--------RDSRKQVGLLKKAMYGLVHAGLLW 135
W +V+RP+GKTV+ +R VF+ K+ DG +E+ K RLVA+GF Q+ G HY E+ + +SIR V+++ A E QLD AYL ++E+EIY+E+P+ +D +V ++KA+YGL +G +W
Sbjct: 49 WTLVDRPEGKTVVGSRWVFRTKLKADGTVERRKARLVAKGFTQIPGTHYNETYTSVARLSSIRFVIALAAERNLELEQLDFTCAYLNGEIEEEIYMEVPKEIETILGRKTQDRENKVSRIQKALYGLKQSGRMW 182
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 114 bits (284), Expect = 1.120e-26 Identity = 56/128 (43.75%), Postives = 85/128 (66.41%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQASIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW 135
GV++ V RP+ + ++ ++ VFK K DG++EKYK RLVAQGF QV+GI Y E+ +P SIR++L++ A WE Q+D+ A+L ++E+EIY+++P ++ S V LKKA+YGL A W
Sbjct: 1025 GVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREW 1152
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: A0A117NI32_PICGL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Picea glauca TaxID=3330 RepID=A0A117NI32_PICGL) HSP 1 Score: 106 bits (264), Expect = 1.430e-25 Identity = 52/129 (40.31%), Postives = 84/129 (65.12%), Query Frame = 0
Query: 9 VWQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQASIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHAGLLW 135
VW++V RP+GK V++++ +FK K DG I KYK R VA+GF Q +G++YEE+ +P SIR ++++ + +G + Q+D+ A+L +E+E+Y+E P+ + K+ V LKKA+YGL A W
Sbjct: 78 VWEIVPRPEGKPVVTSKWIFKIKHTADGSIYKYKARFVARGFSQTEGVYYEETFAPDARYTSIRSIIAIASVMGRKLHQMDVKTAFLNGVIEEEVYIEQPQGFESHGKESHVCRLKKALYGLKQAPRAW 206
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: A0A438E4T4_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=6 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E4T4_VITVI) HSP 1 Score: 109 bits (272), Expect = 4.550e-25 Identity = 53/127 (41.73%), Postives = 84/127 (66.14%), Query Frame = 0
Query: 10 WQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQASIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAYRDSRK-QVGLLKKAMYGLVHAGLLW 135
W+VV+ P K + + ++K K + DG IE+YK RLVAQGF Q++GI Y+E SP S+R L+++ A WE Q+D++ A+L D+E+E+Y++LPE ++ + K +V L+K++YGL A W
Sbjct: 582 WKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEMFSPVAKMTSVRWFLAVVVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 708
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: UPI00192EECC5 (uncharacterized protein LOC120294339 n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192EECC5) HSP 1 Score: 107 bits (266), Expect = 4.980e-25 Identity = 50/128 (39.06%), Postives = 82/128 (64.06%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQASIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW 135
G W++V+ P+GK ++ + VF K DG +E+YK RLVA+GF Q G+ Y+E+ +P S+R++LS+ AA W QLD+ A+L D+E+E+++ LP + ++ +V LKK++YGL + W
Sbjct: 14 GTWKLVDAPEGKKIVGCKWVFTVKCKLDGSVERYKTRLVAKGFTQTYGVDYQETFAPVAKINSVRILLSLAAAFDWPLHQLDVKNAFLNGDLEEEVFMSLPPGFAETEGKVCRLKKSLYGLKQSPRAW 141
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: A0A438GNV2_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GNV2_VITVI) HSP 1 Score: 108 bits (270), Expect = 7.110e-25 Identity = 53/127 (41.73%), Postives = 84/127 (66.14%), Query Frame = 0
Query: 10 WQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQASIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAYRDSRK-QVGLLKKAMYGLVHAGLLW 135
W+VV+ P K + + ++K K + DG IE+YK RLVAQGF Q++GI Y+E+ SP S+R L++ A WE Q+D++ A+L D+E+E+Y++LPE ++ + K +V L+K++YGL A W
Sbjct: 113 WKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQETFSPVAKMTSVRCFLAIAVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 239
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: A5BDW5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=16 Tax=Vitis vinifera TaxID=29760 RepID=A5BDW5_VITVI) HSP 1 Score: 101 bits (252), Expect = 1.040e-24 Identity = 52/129 (40.31%), Postives = 81/129 (62.79%), Query Frame = 0
Query: 9 VWQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQASIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAY--RDSRKQVGLLKKAMYGLVHAGLLW 135
VW +V+ P G + + VFK K D G IE+YK RLVA+GF Q +GI Y E+ SP + S+R++L+++A E +Q+D+ A+L ++E+E+Y++ PE + D + V LKK++YGL A W
Sbjct: 13 VWDLVDLPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVSKLKKSIYGLKQASRQW 141
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: A5BCC7_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BCC7_VITVI) HSP 1 Score: 107 bits (268), Expect = 1.600e-24 Identity = 53/127 (41.73%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 10 WQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQASIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAYRDSRK-QVGLLKKAMYGLVHAGLLW 135
W+VV+ P K + + ++K K + DG IE+YK RLVAQGF Q++GI Y+E SP S+R L++ A WE Q+D++ A+L D+E+E+Y++LPE ++ + K +V L+K++YGL A W
Sbjct: 836 WKVVDLPPEKKAIGCKWIYKIKYNADGSIERYKARLVAQGFTQIEGIDYQEXFSPVAKMTSVRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATGKNKVCKLQKSLYGLKQASRQW 962
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: A0A0C2WM40_AMAMK (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WM40_AMAMK) HSP 1 Score: 106 bits (265), Expect = 3.270e-24 Identity = 53/130 (40.77%), Postives = 81/130 (62.31%), Query Frame = 0
Query: 8 GVWQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQA--SIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW 135
G W++V+ P+GK ++ + VF +K D++GRI ++K RLVAQGF Q G+ Y + + AP S+R L++ A WE RQ D+ AYL +++EIY+ P + D +V LKK++YGL AG +W
Sbjct: 75 GTWELVDLPEGKNIVGCKWVFTKKRDEEGRINRFKARLVAQGFSQKPGVDYSNTGTFAPVMRFESLRTHLALAAVNNWELRQFDVKSAYLNGSLDEEIYMRQPPGFDDGSGRVCRLKKSIYGLKQAGNIW 204
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Match: J4VU23_BEAB2 (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Beauveria bassiana (strain ARSEF 2860) TaxID=655819 RepID=J4VU23_BEAB2) HSP 1 Score: 105 bits (262), Expect = 3.690e-24 Identity = 53/131 (40.46%), Postives = 81/131 (61.83%), Query Frame = 0
Query: 5 IPRGVWQVVERPKGKTVLSTRVVFKRKIDKDGRIEKYKCRLVAQGFRQVKGIHYEESSSPAPAQASIRMVLSMIAALGWEARQLDIDMAYLEADVEKEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW 135
I W VV+RP + VL+ R VFKRK+ DG + ++K R V +GF Q+ G+ ++E+ + AS R++ ++ A GW+ Q+DI A+L ++E EI+VE PE Y ++R QV L K++YGL A W
Sbjct: 143 IENQTWTVVKRPADRKVLTGRWVFKRKLGSDGEVARHKARFVVRGFSQIYGLDFDETYASVVKSASYRILFALQARYGWKCHQMDIKTAFLNGNLEHEIFVEPPEGYPEARNQVLKLCKSLYGLKQAPRQW 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69000.14543.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig69000.14543.1 ID=prot_H-elongata_contig69000.14543.1|Name=mRNA_H-elongata_contig69000.14543.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bpback to top |