prot_H-elongata_contig68949.14537.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68949.14537.1
Unique Nameprot_H-elongata_contig68949.14537.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length208
Homology
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.440e-27
Identity = 79/201 (39.30%), Postives = 109/201 (54.23%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFAPEGLK--IGVIHTD-GGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLLRDQTVA-------LLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRVRDLT-TGQILNRQAVPW 193
            FLKHKSDA  + R  +    A +G+   + ++ +D GGE + G+F S  ++L +K++ TP Y+PQYN V +R LGL+ +  +A       L   V   K+D LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G + D PRD  RV  LT  G I   + V W
Sbjct:  761 FLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 956          
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.460e-27
Identity = 79/201 (39.30%), Postives = 109/201 (54.23%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFAPEGLK--IGVIHTD-GGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLLRDQTVA-------LLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRVRDLT-TGQILNRQAVPW 193
            FLKHKSDA  + R  +    A +G+   + ++ +D GGE + G+F S  ++L +K++ TP Y+PQYN V +R LGL+ +  +A       L   V   K+D LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G + D PRD  RV  LT  G I   + V W
Sbjct:  468 FLKHKSDAGMAFRSFLASVRA-DGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 663          
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5KWE4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWE4_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 3.360e-26
Identity = 75/201 (37.31%), Postives = 106/201 (52.74%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFAPEGLK--IGVIHTD-GGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLL-------RDQTVALLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRVRDLT-TGQILNRQAVPW 193
            FLK K DA ++ R  +    A +G+   + ++ +D GGE + G+F S  ++L +K++ TP Y+PQYN V +R LGL+       R Q   L   V   K+D LWAEAM +AC+  N    S+     SPYE+W+G        P F    Y R  +P  KL P+G +C  +G + D PRD  RV  LT  G I   + V W
Sbjct:   15 FLKSKPDAASAFRSFLASVRA-DGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEASHARPYP-FLKPAYCRWQRPS-KLLPKGEACFYVGPSRDHPRDCHRV--LTRVGTIQETRNVTW 210          
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 5.740e-26
Identity = 71/184 (38.59%), Postives = 100/184 (54.35%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFA---PEGLKIGVIHTDGGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLLRDQTVA-------LLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRV 177
            FL++KSDA ++ R  +    A   P  ++I V   +GG+ + G F S  ++L +K++ TP Y+PQYN V +R LGL+ +  +A       L   V   K+D LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G + D PRD  RV
Sbjct:  129 FLRNKSDAGSAFRTFLASVRANGVPSFVEI-VRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQRPS-KLLPKGESCFYVGPSRDHPRDCHRV 309          
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 9.390e-26
Identity = 78/201 (38.81%), Postives = 108/201 (53.73%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFA---PEGLKIGVIHTDGGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLLRDQTVA-------LLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRVRDLT-TGQILNRQAVPW 193
            FL++KSDA ++ R  +    A   P  ++I V   +GGE + G+F S  ++L +K++ TP Y+PQYN V +R LGL+ +  +A       L   V   K+D LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G + D PRD  RV  LT  G I   + V W
Sbjct:   15 FLRNKSDAGSAFRTFLASVRANGVPSFVEI-VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 210          
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 9.790e-26
Identity = 78/201 (38.81%), Postives = 108/201 (53.73%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFA---PEGLKIGVIHTDGGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLLRDQTVA-------LLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRVRDLT-TGQILNRQAVPW 193
            FL++KSDA ++ R  +    A   P  ++I V   +GGE + G+F S  ++L +K++ TP Y+PQYN V +R LGL+ +  +A       L   V   K+D LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G + D PRD  RV  LT  G I   + V W
Sbjct:  282 FLRNKSDAGSAFRTFLASVRANGVPSFVEI-VRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 477          
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.210e-25
Identity = 79/212 (37.26%), Postives = 110/212 (51.89%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFA---PEGLKIGVIHTDGGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLLRDQTVA-------LLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRV----------RDLTTGQILNRQAVPWHP 195
            FLK++SDA  + R  +    A   P  ++I V   +GGE + G+F S  ++L +K++ TP Y+PQYN V +R LGL+ +  +A       L   V   K+D LWAEAM +AC+  N    S+     SPYE+WYG  P      PF    Y R  +P  KL P+G SC  +G + D PRD  RV          RD+T  ++L  Q  P  P
Sbjct:  349 FLKNESDAGGAFRTFLASVRANIVPSFVEI-VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRVLTRARTIQKTRDVTW-EVLQSQLPPLQP 556          
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5KKZ9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ9_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.350e-25
Identity = 77/201 (38.31%), Postives = 104/201 (51.74%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFAPEGLK--IGVIHTD-GGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLL-------RDQTVALLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRVRDLT-TGQILNRQAVPW 193
            FLK+KSDA  + R  +    A +G+   + ++ +D GGE + G F S  ++L +K++ TP Y+PQYN V +R LGL+       R Q   L   V   K+D LWAEAM  AC+  N    S      SPYE+W+G        P F    Y R  +P  KL PRG +C  +G + D PRD  RV  LT  G I   + V W
Sbjct:   15 FLKNKSDAGRAFRSFLVGVRA-DGIPSLVEIVRSDNGGECFGGDFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLSKTDRLWAEAMHLACEAINHTACSPNSDSKSPYEMWHGEASHARPYP-FLKPAYCRWQRPS-KLLPRGEACCYVGPSRDHPRDCHRV--LTRVGTIQETRNVTW 210          
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.340e-25
Identity = 76/201 (37.81%), Postives = 107/201 (53.23%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFAPEGLK--IGVIHTD-GGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLL-------RDQTVALLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRVRDLT-TGQILNRQAVPW 193
            FLK KSDA ++ R  +    A +G+   + ++ +D GGE + G+F S  ++L +K++ TP Y+PQYN V +R LGL+       R Q   L   V   K+D LWAEAM +AC+  N    S+     SPYE+W+G        P F    Y R  +P  KL P+G +C  +G + D PRD  RV  LT  G I   + V W
Sbjct:  667 FLKSKSDAASAFRSFLASVRA-DGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGEASHARPYP-FLKPAYCRWQRPS-KLLPKGEACFYVGPSRDHPRDCHRV--LTRVGTIQETRNVTW 862          
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 4.320e-25
Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 0
Query:    4 FLKHKSDATNSLRGIINDYFA---PEGLKIGVIHTDGGEEWHGQFLSFLSKLGMKRDSTPPYTPQYNCVVDRALGLLRDQTVA-------LLRGVMECKSDHLWAEAMAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKPGHKLDPRGASCIMLGLAPDCPRDTFRVRDLT-TGQILNRQAVPW 193
            FL++KSDA ++ R  +    A   P  ++I V   +GGE + G+F S  ++L +K++ TP Y+PQYN V +R LGL+ +  +A       L   V   K+D LWAEAM +AC+  N    S+      PYE+WYG  P      PF    Y R  +P  KL P+G SC  +G + D PRD  RV  LT  G I   + V W
Sbjct:  227 FLRNKSDAGSAFRTFLASVRANGVPSFVEI-VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGE-PRPARPYPFLKPAYCRWQRPT-KLLPKGESCFYVGPSRDHPRDCHRV--LTRAGTIQETRDVTW 422          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68949.14537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBA7_9PHAE2.440e-2739.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE2.460e-2739.30Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWE4_9PHAE3.360e-2637.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVR5_9PHAE5.740e-2638.59Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKK1_9PHAE9.390e-2638.81Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE9.790e-2638.81Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JV76_9PHAE1.210e-2537.26Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KKZ9_9PHAE1.350e-2538.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K2M6_9PHAE2.340e-2537.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3Y0_9PHAE4.320e-2538.31Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..142
e-value: 3.1E-13
score: 51.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..130
score: 12.982
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 9..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68949contigH-elongata_contig68949:401..1024 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68949.14537.1mRNA_H-elongata_contig68949.14537.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68949 401..1024 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68949.14537.1 ID=prot_H-elongata_contig68949.14537.1|Name=mRNA_H-elongata_contig68949.14537.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=208bp
MVRFLKHKSDATNSLRGIINDYFAPEGLKIGVIHTDGGEEWHGQFLSFLS
KLGMKRDSTPPYTPQYNCVVDRALGLLRDQTVALLRGVMECKSDHLWAEA
MAYACDMWNRCTSSSLDSGTSPYELWYGRRPTFNNIPPFGTVGYLRRSKP
GHKLDPRGASCIMLGLAPDCPRDTFRVRDLTTGQILNRQAVPWHPPTRGE
ENTPLSAP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf