prot_H-elongata_contig68857.14524.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68857.14524.1
Unique Nameprot_H-elongata_contig68857.14524.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: D7FUH7_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH7_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.030e-30
Identity = 60/76 (78.95%), Postives = 68/76 (89.47%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPNTSTLVRATSDNIDELVGIVQEL 76
            +DVVIVLD+SGSMSQYGRLDLAK+AAETVI TLGADSFVNVV FSE ARVL+ N++TLVRAT DN+ ELV +VQ L
Sbjct:  114 KDVVIVLDVSGSMSQYGRLDLAKEAAETVINTLGADSFVNVVTFSETARVLLTNSTTLVRATEDNLGELVSLVQNL 189          
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: A0A7S2LVH6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVH6_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.300e-14
Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPNTSTLVRATSDNIDELVGIVQEL 76
            +DVV+VLD+SGSMS YGR+DLAK+AA TVI+TL     V V+AFS+ A  ++P    LVRAT++N + L+  +Q+L
Sbjct:  261 KDVVLVLDVSGSMSDYGRMDLAKEAAITVIKTLTISDRVAVIAFSDYAYQVLPE-DLLVRATNENKNRLIDSIQQL 335          
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: K0TQX2_THAOC (VWFA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQX2_THAOC)

HSP 1 Score: 73.2 bits (178), Expect = 2.180e-13
Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPNTSTLVRATSDNIDELVGIVQEL 76
            +DV++V+D+SGSM  +GRL LAK+AA TVI+TL       ++ FS +AR +   + TL+RAT DN D LV  ++ L
Sbjct:  194 KDVILVIDVSGSMGNHGRLSLAKEAATTVIETLTVADRFAIIPFSHEARFIGGPSETLLRATKDNKDRLVSEIENL 269          
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: A0A7S2LVG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVG3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 8.650e-12
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPN----TSTLVRATSDNIDELVGIVQEL 76
            +DV+IVLD+SGSMS YG++DLAK AA TV+ TL     V V+ FS+ A  +       T +L+RAT++N   L+  +++L
Sbjct:   56 KDVIIVLDVSGSMSNYGKMDLAKKAAITVVDTLTISDRVAVIVFSDSAYQVPVGVGGGTDSLIRATNENKKLLIESIRQL 135          
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: A0A7S3LU80_9EUKA (Hypothetical protein n=5 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LU80_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 3.250e-11
Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPNTSTLVRATSDNIDELVGIVQEL 76
            +D+VI++D SGSM QYGR+D A +AA+ VI T  A+ +++VV FS  A       S LVRATSDN   L   V +L
Sbjct:  252 KDIVILIDKSGSMGQYGRMDKAIEAAQAVISTSSANDYISVVQFSSTAGTPACFPSRLVRATSDNKQALKDFVGDL 327          
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: A0A7S3LUB0_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3LUB0_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 3.270e-11
Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPNTSTLVRATSDNIDELVGIVQEL 76
            +D+VI++D SGSM QYGR+D A +AA+ VI T  A+ +++VV FS  A       S LVRATSDN   L   V +L
Sbjct:  252 KDIVILIDKSGSMGQYGRMDKAIEAAQAVISTSSANDYISVVQFSSTAGTPACFPSRLVRATSDNKQALKDFVGDL 327          
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: A0A6B2L926_9EUKA (VWFA domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L926_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 1.690e-10
Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPNTSTLVRATSDNIDELVGIVQEL 76
            +DVV+++D+SGSM+ + RL LAK AA TV++TL  + +V +V FS    V+      L+ AT  NID L G V  L
Sbjct:   75 KDVVLIVDVSGSMADFNRLSLAKSAATTVLRTLTINDYVGIVKFSTGPGVVGSPRGLLLPATQANIDSLSGAVDGL 150          
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: A0A6B2L9Q3_9EUKA (VWFA domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L9Q3_9EUKA)

HSP 1 Score: 60.1 bits (144), Expect = 7.430e-9
Identity = 29/69 (42.03%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPNTSTLVRATSDNIDEL 69
            +DV+I++D+SGSMS   R+ LAK+AA TV+ TL  + +V V+ FS DA ++   +   + A+  N+D L
Sbjct:   63 KDVIILIDVSGSMSYNNRMALAKEAALTVLDTLTMNDYVGVIQFSSDAHIVGAPSGFFLPASKTNLDSL 131          
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: A0A6J2UQ43_CHACN (voltage-dependent calcium channel subunit alpha-2/delta-4 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2UQ43_CHACN)

HSP 1 Score: 60.1 bits (144), Expect = 9.020e-9
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPN-TSTLVRATSDNIDELVGIVQEL 76
            +D+VIV+DISGSM    RL +AK    T++ TLG + FVNV+A+S+  R + P    TLV+A  DN +    +V+EL
Sbjct:  239 KDIVIVVDISGSMKGL-RLTIAKHTINTILDTLGENDFVNVIAYSDYVRYVEPCFKGTLVQADLDNREHFKLLVEEL 314          
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Match: A0A3P8VIG2_CYNSE (Calcium channel, voltage-dependent, alpha 2/delta subunit 4a n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3P8VIG2_CYNSE)

HSP 1 Score: 59.7 bits (143), Expect = 1.190e-8
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 0
Query:    1 QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARVLMPN-TSTLVRATSDNIDELVGIVQEL 76
            +DVVIV+D+SGSM    RL +AK    T++ TLG + FVN++A+S+  R + P    TLV+A  DN +    +V+EL
Sbjct:  214 KDVVIVVDVSGSMKGL-RLTIAKHTINTILDTLGENDFVNIIAYSDYVRYVEPCFKGTLVQADLDNREHFKLLVEEL 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68857.14524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUH7_ECTSI1.030e-3078.95VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2LVH6_9STRA1.300e-1453.95Hypothetical protein (Fragment) n=2 Tax=Skeletonem... [more]
K0TQX2_THAOC2.180e-1347.37VWFA domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S2LVG3_9STRA8.650e-1245.00Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S3LU80_9EUKA3.250e-1148.68Hypothetical protein n=5 Tax=Palpitomonas bilix Ta... [more]
A0A7S3LUB0_9EUKA3.270e-1148.68Hypothetical protein n=4 Tax=Palpitomonas bilix Ta... [more]
A0A6B2L926_9EUKA1.690e-1044.74VWFA domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6B2L9Q3_9EUKA7.430e-942.03VWFA domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6J2UQ43_CHACN9.020e-945.45voltage-dependent calcium channel subunit alpha-2/... [more]
A0A3P8VIG2_CYNSE1.190e-844.16Calcium channel, voltage-dependent, alpha 2/delta ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 1..76
e-value: 7.1E-18
score: 67.2
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 2..74
IPR002035von Willebrand factor, type APFAMPF13519VWA_2coord: 3..57
e-value: 1.4E-11
score: 45.0
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 2..76
score: 10.816
NoneNo IPR availablePANTHERPTHR10166VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATEDcoord: 2..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68857contigH-elongata_contig68857:15..942 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68857.14524.1mRNA_H-elongata_contig68857.14524.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68857 15..942 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68857.14524.1 ID=prot_H-elongata_contig68857.14524.1|Name=mRNA_H-elongata_contig68857.14524.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
QDVVIVLDISGSMSQYGRLDLAKDAAETVIQTLGADSFVNVVAFSEDARV
LMPNTSTLVRATSDNIDELVGIVQEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf
IPR002035VWF_A