prot_H-elongata_contig688.14517.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig688.14517.1
Unique Nameprot_H-elongata_contig688.14517.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length506
Homology
BLAST of mRNA_H-elongata_contig688.14517.1 vs. uniprot
Match: D7FP33_ECTSI (E3 ubiquitin-protein ligase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP33_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 1.090e-90
Identity = 201/566 (35.51%), Postives = 299/566 (52.83%), Query Frame = 0
Query:    2 SRANPASNIEIKQNVFQLPDMAFCVSYLEGCLDLGGTCFNPDWTPWYLNGLDGFLYDMNDF--DSTEKSLAIEAKYPGCSVIPLSNLKMDQEGIDNGDVTSLSASLYFFWDEDHYNTYNRTVAGSNINTQFVKVFFIDLENNVEAIGENIVDAKLPYERVIVTRNTDIATIKNHMVLTMTEFVGISSTSGKEKKAERTFAQSTTSAPQNWYWLGESKNITLSFMTLDVTIGKFEYTRIVEVDPVNGWTIIGSIGGIWQFVVLGFGMFFVYAEKQPPDMKILNMRKTIFKPARIITNVLSNVSSNSSAQVKNKYRQQSFSRGNRIAD------------------ASQQSSPPERI-NPNTVSRSSST------RPRGSRPAQRVQTEDRDQYDEWLPPGWVERNDEQDGTDYINTIMETTKRQRPNL--RASFNNRFAIQAVDIPMVRSRVRS-ASSSVNPLESK-----EEERGLDFNDTEIIQSSVWTTSSAPLRLVAPTRVDMS----------------------------LPPNWQEHTTRHGNIYYANLTTKRTQLERPQ 504
            SR +PAS+IE+KQ  ++  D+ FC  +  GCL+   +CF  D++   +   +GF  D++ F  D+ + + AIE ++P C VIPLS L MD++GI++GDV S  AS YF W E   +T++  +    IN QF+  + ID+E  VE +    VD KLPY R+  T  T++ T  NHMV+ +TEF GI     +E++ +RT++QSTT+  QNWYW  E+  +  + + +DV+I KFEYT IVEVDPV+GW+IIG+IGGIWQFVV GFG+FFVY+ KQ PD K+ N RK++ KPA I+   LS + S SS  + N+  +   S  +  AD                    +QS+PP+ + +     ++S T      RP  +     V  E      + LPPGW+ R D+   T + +T+ +TT+ +RP    R+S  +    + +D+PM  +R  S ASS+ N   S      +   G +    +      W   S P      T V +S                            LPPNW+  T  +   YY N  T+ ++ E P+
Sbjct:   79 SRKDPASSIELKQEHYEFADIMFCTEFTNGCLEETNSCF--DFSAGAMVSAEGFTDDLDTFLDDNADATSAIEEEFPHCRVIPLSRLTMDEDGINSGDVDSFDASFYFLWYESA-DTFDPEIYP--INAQFLSAYLIDVEAGVEPLEGKSVDVKLPYARIEPTTATELTTTVNHMVMGLTEFAGIDDNGNREER-QRTYSQSTTTGTQNWYWTEETIELEFALIMVDVSIPKFEYTSIVEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVYSVKQSPDRKMRNFRKSVTKPASIVNKRLSTLGSRSS--ISNQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGGPQASGTALNRIFRPAHASSGAGVSREHGQLSGDPLPPGWISRTDDSGKTYFQDTVSKTTQWERPTQHPRSSSVSSGRPEVIDMPMAHTRRGSNASSADNSRRSSSSHAHDHPHGRESAAGDPSPPPAW--GSFPAAPSYKTAVYLSNRSAQTAAGXXXXXXXXXXXXXXXXGGPLPPNWERRTASNNRPYYVNTVTRESKWEAPR 634          
BLAST of mRNA_H-elongata_contig688.14517.1 vs. uniprot
Match: D7FP34_ECTSI (Similar to neural cell expressed, developmentally down-regulated 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP34_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 1.070e-73
Identity = 177/456 (38.82%), Postives = 254/456 (55.70%), Query Frame = 0
Query:    2 SRANPASNIEIKQNVFQLPDMAFCVSYLEGCLDLGGTCFNPDWTPWYLNGLDGFL-YDMNDFDS-TEKSLAIEAKYPGCSVIPLSNLKMDQEGIDNGDVTSLSASLYFFWDE-DHYNTYNRTVAGSNINTQFVKVFFIDLENNVEAIGENIVDAKLPYERVIVTRNTDIATIKNHMVLTMTEFVGISSTSGKEKKAERTFAQSTTSAPQNWYWLGES-KNITLSFMTLDVTIGKFEYTRIVEVDPVNGWTIIGSIGGIWQFVVLGFGMFFVYAEKQPPDMKILNMRKTIFKPARIITNVLS--NVSSNSSAQ---------------VKNKYRQQSFSRGNRIADASQQSSPPERINPNTVSRSSSTRPRGSRPAQ-RVQTEDRDQYDEW--LPPGWVERNDEQDGTDYINTIMETTKRQRPNLR--ASFNNRFAIQAVDIPMVRSRVRSASSSVN 431
            SR +PAS+IE+KQ  +  PD+A C ++ +GCLD    CF  D +   +    GFL YD N  D     S   E  YP C  +PLS + +D+ G+ NG VTS S + Y  WDE D +  ++  +    IN QF+ ++ I  ++++E+     VDAK+PY R+ +T +T      NHMVL +TEF GI+  +G +K+ +R+F+Q+T +  ++W+W  E   ++   F  ++++IGKFE+T I EVDPV+GW+IIG+IGGIWQFVV GFG+FFV++EKQ PD K+ N RK+I KPA      LS  N SS SS Q               VK +    S    N +  A Q +SP      N +  +  + P  S  A  R+   +R        LP GW+E  D      Y++TI +TT+ +RP  R  +S       QAVD PM +SR  S +SS N
Sbjct:   71 SRKDPASSIELKQEHYTFPDVALCTTFGKGCLDYDNDCFE-DLSFTSMFNQTGFLDYDQNFTDDFAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVLWDEKDTFYDHSYYL----INRQFLDMYLIPPDSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLGVTEFTGINE-NGNKKEKQRSFSQATITGVEHWWWGAEDYDSVEFGFFMVELSIGKFEFTSIEEVDPVDGWSIIGAIGGIWQFVVTGFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLSILNTSSRSSNQDVEIDASEEDLPVEWVKKQRPNGSIYYFNVMTGAKQTASP------NHLDNAGGSAPPPSNSALGRIFQGNRSARPNSGPLPAGWIEGTDGDGKKYYLDTINKTTQWERPLQREHSSGGPDRRPQAVDAPMSQSRRYSHASSDN 514          
BLAST of mRNA_H-elongata_contig688.14517.1 vs. uniprot
Match: D8LQB8_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB8_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 1.310e-73
Identity = 139/316 (43.99%), Postives = 201/316 (63.61%), Query Frame = 0
Query:    2 SRANPASNIEIKQNVFQLPDMAFCVSYLEGCLDLGGT-CF-NPDWTPWYLNGLDGFLYDMNDFDSTEKSLAIEAKYPGCSVIPLSNLKMDQEGIDNGDVTSLSASLYFFWDEDHYNTYNRTV----AGSNINTQFVKVFFIDLENNVEAIGENIVDAKLPYERVIVTRNTDIATIKNHM---------VLTMTEFVGISSTSGKEKKAERTFAQSTTSAPQNWYWLGESKNITLSFMTLDVTIGKFEYTRIVEVDPVNGWTIIGSIGGIWQFVVLGFGMFFVYAEKQPPDMKILNMRKTIFKPARIITNVLSNVSS 302
            SR +PA++ E+K  VF  PD+A CVS  EGCL    + CF N  +T +   G  GF+    + ++ E SLAI+  YP C V+P S L ++Q GI+NGD+    A     WDED ++ ++  V     G +INTQFV +FF+D++  VEAIGE + DAKLPY+R+  T +  +    +HM         V+ MT+F  IS++SG+++  +RTF QS+TSA  NWY      +  L+ +  ++ I KFEYT I +VDPV+GW IIG+IGG+WQFVV+ FG+FFV++EKQ PD KI N +K++ KPA ++   LS+ +S
Sbjct:   74 SRTDPAASFELKLEVFTFPDLAVCVSQYEGCLTYPPSDCFVNASFTMF---GQYGFM--EAELEADEASLAIQEAYPHCRVLPTSKLTVNQTGIENGDINHFYAIFGLLWDEDPHDDFDPAVELASTGVSINTQFVNLFFVDVDLGVEAIGEELTDAKLPYDRLSPTTSGSMVGTMSHMKSCWATTGQVIEMTQFQPISTSSGQKQDPQRTFTQSSTSATVNWY--NPDFDEELAALLFNMFIPKFEYTSIEQVDPVDGWAIIGAIGGVWQFVVIAFGLFFVFSEKQLPDKKIRNFKKSVAKPASMVNRHLSSANS 382          
BLAST of mRNA_H-elongata_contig688.14517.1 vs. uniprot
Match: A0A6H5JSI3_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI3_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.300e-63
Identity = 119/258 (46.12%), Postives = 168/258 (65.12%), Query Frame = 0
Query:   61 DFDSTEKSLAIEAKYPGCSVIPLSNLKMDQEGIDNGDVTSL------------SASLYFFWDEDHYNTYNRTVA----GSNINTQFVKVFFIDLENNVEAIGENIVDAKLPYERVIVTRNTDIATIKNHMVLTMTEFVGISSTSGKEKKAERTFAQSTTSAPQNWYWLGESKNITLSFMTLDVTIGKFEYTRIVEVDPVNGWTIIGSIGGIWQFVVLGFGMFFVYAEKQPPDMKILNMRKTIFKPARIITNVLSNVSS 302
            + ++ E SLAI+  YP C V+P S L ++Q GIDNGD+               +AS    WDED ++ ++  V     G +INTQFV +FF+D++  VEAIGE + DAKLPY R+  T N  +    +HMV+ MT+F  IS++SG+++  +RTF QS+TSA  NWY      N  L+ +  ++ I KFEYT I +VDPV+GW IIG+IGG+WQFVV+ FG+FFV++EKQ PD KI N +K++ KPA ++   LS+ SS
Sbjct:  158 ELEADEASLAIQEAYPHCRVLPTSKLTVNQTGIDNGDINHFYATFGVGGDGRDNASCALLWDEDPHDDFDPAVELASRGVSINTQFVNLFFVDVDLGVEAIGEELTDAKLPYNRLSPTTNGSMVGTMSHMVIEMTQFQPISTSSGEKQDPQRTFTQSSTSATVNWY--NPDFNEELAALLFNMFIPKFEYTSIEQVDPVDGWAIIGAIGGVWQFVVIAFGLFFVFSEKQLPDKKIRNFKKSVAKPASMVKRHLSSASS 413          
BLAST of mRNA_H-elongata_contig688.14517.1 vs. uniprot
Match: A0A6H5JZ12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ12_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 6.080e-58
Identity = 127/331 (38.37%), Postives = 184/331 (55.59%), Query Frame = 0
Query:    2 SRANPASNIEIKQNVFQLPDMAFCVSYLEGCLDLGGTCFNPDWTPWYLNGLDGFLYDMNDF--DSTEKSLAIEAKYPGCSVIPLSNLKMDQEGIDNGDVTSLSASLY------------------FFWDEDHYNTYNRTVAGSNINTQFVKVFFIDLENNVEAIGENIVDAKLPYERVIVTRNTDIATIKNHMVLTMTEFVGISSTSGKEKKAERTFAQSTTSAPQNWYWLGESKNITLSFMTLDVTIGKFEYTRIV------EVDPVNGWTIIGSI-GGIWQFVVLGFGMFFVYAEKQPPDMKILNMRKTIFKPARIITNVLSNVSSNSS 305
            SR +PAS+IE+KQ  ++ PD+ FC  +  GCL               +   +GF  D++ F  D+ + + AIE ++P C V PLS L +D++GI++GDV SL AS Y                  F W E   +T++R  A  NIN QF+  + ID+E  VE +    VD KLPY R+    +T+   I NHMV+ +TEF GI     +E++ +RT++QSTT+  QNWYW  E+ +   + M +DV+I KFEYT I         + V+ W  +        +FVV GFG+FFV++ KQ PD K+ N RK++ KPA I+   LS + S SS
Sbjct:   84 SRKDPASSIELKQEHYEFPDIMFCTEFTNGCLXXXXXXXXX--AVGAIASAEGFTDDLDTFLDDNADATSAIEEEFPHCRVFPLSRLTIDEDGINSGDVDSLYASFYVREKKRAGQSEAASDGEQFLWYESA-DTFDR--ATYNINAQFLSTYLIDVEAGVEPLEGKSVDVKLPYARIEPITDTEFTAIANHMVVGLTEFAGIDDNGNREER-QRTYSQSTTTGTQNWYWTDETYDFEFALMIVDVSIPKFEYTFIAVSMNQRSKEEVSPWFALPPFKDSAAEFVVTGFGLFFVFSVKQSPDRKMRNFRKSVTKPASIVNKRLSTLGSRSS 408          
BLAST of mRNA_H-elongata_contig688.14517.1 vs. uniprot
Match: A0A6H5JBE8_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE8_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 2.940e-37
Identity = 110/344 (31.98%), Postives = 161/344 (46.80%), Query Frame = 0
Query:   12 IKQNVFQLPDMAFCVSYLEGCLDLGGTCFNPDWTPWYLNG------------------------LDGFL-YDMN-DFDSTEKSLAIEAKYPGCSVIPLSNLKMDQEGIDNGDVTSLSASLYF-----------FWDEDHYNTYNRTVAGSN-----------------INTQFVKVFFIDLENNVEAIGENIVDAKLPYERVIVTRNTDIATIKNHMVLTMTEFVGISSTSGKEKKAERTFAQSTTSAPQNWYWLGESKN-ITLSFMTLDVTIGKFEYTRIVEVDPVNGWTIIGSIGGIWQFVVLGFGMFFVYAEKQPPDMKILNMRKTIFKPARIITNVLSNV 300
            + Q  +  PD+A C ++ +GCLD    CF         N                         + GFL YD N   D    S   E  YP C  +PLS + +D+ G+ NG VTS S + Y             W +  YN        SN                 IN QF+ ++ I   +++E+     VDAK+PY R+ +T +T      NHMVL++TEF GI+    KE+K ER+F+Q+  +  ++W+W  E  N +   F  ++++IGKFE+T I EV                +FVV GFG+FFV++E+Q PD +  N RK+I KPA    N LS++
Sbjct:   93 LSQEYYTFPDVALCTTFGKGCLDYDNDCFEDRSFASAFNQTAARPTVPRSFACRVGLTNAPMIIIQGFLDYDQNFTADYAYVSEPFEEVYPNCKFVPLSMMTVDETGVKNGSVTSFSTAFYVRIPVQSAGLVVAWVDRRYNRAWVWCIRSNQVLWDEKGTYYDHSYYLINRQFLDLYLIPPGSSIESFTSASVDAKVPYSRLNLTTDTAFEATINHMVLSLTEFTGINKNGNKEEK-ERSFSQTAITGVEHWWWGYEDYNSVEFGFFMVELSIGKFEFTSI-EV----------------EFVVTGFGLFFVFSERQSPDRRFRNFRKSIRKPAEFAGNRLSSL 418          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig688.14517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FP33_ECTSI1.090e-9035.51E3 ubiquitin-protein ligase, putative n=1 Tax=Ecto... [more]
D7FP34_ECTSI1.070e-7338.82Similar to neural cell expressed, developmentally ... [more]
D8LQB8_ECTSI1.310e-7343.99WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JSI3_9PHAE1.300e-6346.12WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A6H5JZ12_9PHAE6.080e-5838.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE8_9PHAE2.940e-3731.98WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 473..505
e-value: 5.5E-6
score: 35.9
coord: 369..401
e-value: 4.7
score: 10.6
IPR001202WW domainPFAMPF00397WWcoord: 474..503
e-value: 7.2E-7
score: 29.2
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 472..505
score: 12.275
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 368..401
score: 8.788
NoneNo IPR availableGENE3D2.20.70.10coord: 460..505
e-value: 2.1E-9
score: 38.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..245
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 246..270
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 271..505
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 471..503

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig688contigH-elongata_contig688:1568..15788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig688.14517.1mRNA_H-elongata_contig688.14517.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig688 1539..16645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig688.14517.1 ID=prot_H-elongata_contig688.14517.1|Name=mRNA_H-elongata_contig688.14517.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=506bp
MSRANPASNIEIKQNVFQLPDMAFCVSYLEGCLDLGGTCFNPDWTPWYLN
GLDGFLYDMNDFDSTEKSLAIEAKYPGCSVIPLSNLKMDQEGIDNGDVTS
LSASLYFFWDEDHYNTYNRTVAGSNINTQFVKVFFIDLENNVEAIGENIV
DAKLPYERVIVTRNTDIATIKNHMVLTMTEFVGISSTSGKEKKAERTFAQ
STTSAPQNWYWLGESKNITLSFMTLDVTIGKFEYTRIVEVDPVNGWTIIG
SIGGIWQFVVLGFGMFFVYAEKQPPDMKILNMRKTIFKPARIITNVLSNV
SSNSSAQVKNKYRQQSFSRGNRIADASQQSSPPERINPNTVSRSSSTRPR
GSRPAQRVQTEDRDQYDEWLPPGWVERNDEQDGTDYINTIMETTKRQRPN
LRASFNNRFAIQAVDIPMVRSRVRSASSSVNPLESKEEERGLDFNDTEII
QSSVWTTSSAPLRLVAPTRVDMSLPPNWQEHTTRHGNIYYANLTTKRTQL
ERPQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf