prot_H-elongata_contig68707.14506.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig68707.14506.1
Unique Name	prot_H-elongata_contig68707.14506.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	184

Homology

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: D7FZG6_ECTSI (Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG6_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 5.630e-97
Identity = 147/168 (87.50%), Postives = 158/168 (94.05%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALV YKHPVFVYIPPNGELRGGAWVVIDPTIN++VMEMYAD ESRGGILEPPGICEVKFRA DQ+ KMHELDP+L GLD D+ + GSEEDEQALK+QIK+RE+ L PMYLQV+
Sbjct:  757 QVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVAYKHPVFVYIPPNGELRGGAWVVIDPTINDQVMEMYADAESRGGILEPPGICEVKFRAADQITKMHELDPVLQGLDGDVPMAGSEEDEQALKKQIKSREDALLPMYLQVA 924

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A6H5L0S0_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S0_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 9.870e-93
Identity = 148/173 (85.55%), Postives = 157/173 (90.75%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEE-----VMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALV YKHPVFVYIPPNGELRGGAWVVIDPTIN++     VMEMYAD ESRGGILEPPGICEVKFRA DQ+ KMHELDPIL GLD D+ + GSEEDEQALK+QIK+RE  L PMYLQV+
Sbjct: 1810 QVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVAYKHPVFVYIPPNGELRGGAWVVIDPTINDQARAHRVMEMYADAESRGGILEPPGICEVKFRAADQITKMHELDPILQGLDGDVPMAGSEEDEQALKKQIKSRENALLPMYLQVA 1982

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A836CCC4_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC4_9STRA)

HSP 1 Score: 298 bits (764), Expect = 1.910e-90
Identity = 141/168 (83.93%), Postives = 154/168 (91.67%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VWFPDSAYKTAQAINDFN GENLPL+IFANWRGFSGGTRDM+GEILKFGAQIVDALV YKHPVFVYIPPNGELRGGAWVV+DPTINEEVMEMYAD +SRGGILEPPGICEVKFRAPDQ++KMH+LD IL  LDADL+V  + ED  ALK+QIK RE+ L PMYLQV+
Sbjct: 1758 QVWFPDSAYKTAQAINDFNHGENLPLIIFANWRGFSGGTRDMFGEILKFGAQIVDALVAYKHPVFVYIPPNGELRGGAWVVVDPTINEEVMEMYADTDSRGGILEPPGICEVKFRAPDQVLKMHQLDVILRSLDADLEVAATPEDAAALKKQIKEREDALLPMYLQVA 1925

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A7S0EW76_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EW76_9CRYP)

HSP 1 Score: 271 bits (692), Expect = 1.810e-88
Identity = 129/168 (76.79%), Postives = 144/168 (85.71%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VWFPDSAYKTAQAI DFNRGENLPL+IFANWRGFSGGTRDMY EILKFG+ IVD L  YKHPVFVY+PPNGELRGGAWVV+DPTINEE+MEMYADV+SRGGILEPPGICEVK+RAPDQ+  MH LDP L  LDA L    SEE  + +K+QIK RE  L P+YLQ++
Sbjct:   27 QVWFPDSAYKTAQAIEDFNRGENLPLIIFANWRGFSGGTRDMYNEILKFGSMIVDGLRTYKHPVFVYLPPNGELRGGAWVVVDPTINEEMMEMYADVQSRGGILEPPGICEVKYRAPDQIKTMHRLDPELQELDAKLDKATSEEAAK-IKEQIKKRENTLMPLYLQIA 193

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A4D9D5Z2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z2_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.140e-86
Identity = 126/168 (75.00%), Postives = 145/168 (86.31%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VW+PDSA+KTAQAI DFNRGENLPL+IFANWRGFSGGTRDM+GEILKFGA+IVDAL  Y+HPVFVYIPPNGELRGGAWVVIDPTINEE+MEMYAD +SRGGILEPPGICEVKFR  DQ+  MH LDP++  LD +L+   +E+D   L QQ+K REE L P+Y QV+
Sbjct:  214 QVWYPDSAFKTAQAIEDFNRGENLPLIIFANWRGFSGGTRDMFGEILKFGAKIVDALRTYRHPVFVYIPPNGELRGGAWVVIDPTINEEMMEMYADKDSRGGILEPPGICEVKFRNADQVSAMHRLDPVIQALDGELQNAKTEQDAAKLTQQLKEREEALLPLYTQVA 381

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A0B4L7Y6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7Y6_9STRA)

HSP 1 Score: 278 bits (711), Expect = 2.570e-83
Identity = 130/168 (77.38%), Postives = 147/168 (87.50%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VW+PDSA+KTAQAI DFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGA+IVDAL  Y+HPVFVYIPPNGELRGGAWVVIDPTINEE+MEMYAD +SRGGILEPPGICEVKFRA DQ+  MH LDP++  LD +L+   +E D   LKQQ+K REE L P+Y+QV+
Sbjct: 1844 QVWYPDSAFKTAQAIEDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAKIVDALRTYRHPVFVYIPPNGELRGGAWVVIDPTINEEMMEMYADKDSRGGILEPPGICEVKFRAADQISAMHRLDPVIQALDGELQNAKTEADAIKLKQQLKEREEALLPLYMQVA 2011

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A7S2F2I2_9STRA (Acetyl-CoA carboxylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2I2_9STRA)

HSP 1 Score: 276 bits (707), Expect = 8.850e-83
Identity = 131/168 (77.98%), Postives = 146/168 (86.90%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VW+PDSAYKTAQAINDF RGENLPL+IFANWRGFSGGTRDM GEILKFG+ IVDALV Y+HPVFVYIPPN ELRGGAWVVIDPTINEEVMEMYAD ESRGGILEPPGICEVKFR  DQ+ KMH+LDPIL  LD +   +G+E+D  ++K QIK RE  L P+YLQV+
Sbjct: 1801 QVWYPDSAYKTAQAINDFGRGENLPLIIFANWRGFSGGTRDMAGEILKFGSMIVDALVKYEHPVFVYIPPNAELRGGAWVVIDPTINEEVMEMYADEESRGGILEPPGICEVKFRERDQLNKMHQLDPILASLDEESDAIGNEDDLGSIKAQIKERETQLLPLYLQVA 1968

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: L1JJM5_GUITC (Acetyl-CoA carboxylase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JJM5_GUITC)

HSP 1 Score: 271 bits (693), Expect = 6.750e-81
Identity = 129/168 (76.79%), Postives = 144/168 (85.71%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VWFPDSAYKTAQAI DFNRGENLPL+IFANWRGFSGGTRDMY EILKFG+ IVD L  YKHPVFVY+PPNGELRGGAWVV+DPTINEE+MEMYADV+SRGGILEPPGICEVK+RAPDQ+  MH LDP L  LDA L    +EE  Q +K+QIK RE  L P+YLQ++
Sbjct: 1762 QVWFPDSAYKTAQAIEDFNRGENLPLIIFANWRGFSGGTRDMYNEILKFGSMIVDGLRTYKHPVFVYLPPNGELRGGAWVVVDPTINEEMMEMYADVQSRGGILEPPGICEVKYRAPDQIKTMHRLDPELQELDAKLDKATAEEAAQ-IKEQIKKRENTLMPLYLQIA 1928

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: I2CQP5_NANGC (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQP5_NANGC)

HSP 1 Score: 270 bits (690), Expect = 1.710e-80
Identity = 125/168 (74.40%), Postives = 145/168 (86.31%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VW+PDSA+KTAQA+ DFNRGENLPL+IFANWRGFSGGTRDM+GEILKFGA+IVDAL  Y+HPVFVYIPPNGELRGGAWVVIDPTINEE+MEMYAD +SRGGILEPPGICEVKFR  DQ+  MH LDP++  LD +L+   +E+D   L QQ+K REE L P+Y QV+
Sbjct: 1846 QVWYPDSAFKTAQAMEDFNRGENLPLIIFANWRGFSGGTRDMFGEILKFGAKIVDALRTYRHPVFVYIPPNGELRGGAWVVIDPTINEEMMEMYADKDSRGGILEPPGICEVKFRNADQVSAMHRLDPVIQALDGELQNAKTEQDAAKLTQQLKEREEALLPLYTQVA 2013

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BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Match: A0A7S0M2Y7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M2Y7_9CRYP)

HSP 1 Score: 265 bits (677), Expect = 3.840e-80
Identity = 124/168 (73.81%), Postives = 142/168 (84.52%), Query Frame = 0

Query:   16 KVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGFSGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPTINEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDADLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS 183
            +VWFPDSAYKTAQAI DFNRGENLPL+IFANWRGFSGGTRDM+ EILKFG+ IVDAL  Y+HPVF+Y+PPNGELRGGAWVV+DPTINE++MEMYAD ESRGGILEPPGICEVKFR  DQ+  MH LDP+LL LDA L       +  +LK+QI  REE L P+YLQ++
Sbjct:  651 QVWFPDSAYKTAQAIEDFNRGENLPLIIFANWRGFSGGTRDMFNEILKFGSMIVDALRTYQHPVFIYLPPNGELRGGAWVVVDPTINEQMMEMYADRESRGGILEPPGICEVKFRKQDQVKAMHRLDPVLLDLDAKLGANKDVIEISSLKKQIAAREETLLPLYLQIA 818

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot

BLAST of mRNA_H-elongata_contig68707.14506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FZG6_ECTSI	5.630e-97	87.50	Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus...	[more]
A0A6H5L0S0_9PHAE	9.870e-93	85.55	Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP...	[more]
A0A836CCC4_9STRA	1.910e-90	83.93	Acetyl-CoA carboxylase n=1 Tax=Tribonema minus Tax...	[more]
A0A7S0EW76_9CRYP	1.810e-88	76.79	Hypothetical protein n=1 Tax=Hanusia phi TaxID=303...	[more]
A0A4D9D5Z2_9STRA	3.140e-86	75.00	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A0B4L7Y6_9STRA	2.570e-83	77.38	Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis ocu...	[more]
A0A7S2F2I2_9STRA	8.850e-83	77.98	Acetyl-CoA carboxylase n=1 Tax=Dictyocha speculum ...	[more]
L1JJM5_GUITC	6.750e-81	76.79	Acetyl-CoA carboxylase n=2 Tax=Guillardia theta Ta...	[more]
I2CQP5_NANGC	1.710e-80	74.40	Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gad...	[more]
A0A7S0M2Y7_9CRYP	3.840e-80	73.81	Hypothetical protein n=1 Tax=Cryptomonas curvata T...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034733	Acetyl-CoA carboxylase	PFAM	PF01039	Carboxyl_trans	coord: 17..182 e-value: 1.0E-50 score: 172.8
None	No IPR available	GENE3D	3.90.226.10		coord: 1..183 e-value: 6.9E-78 score: 264.3
None	No IPR available	PANTHER	PTHR45728	FAMILY NOT NAMED	coord: 14..182
None	No IPR available	PANTHER	PTHR45728:SF6		coord: 14..182
IPR011763	Acetyl-coenzyme A carboxyltransferase, C-terminal	PROSITE	PS50989	COA_CT_CTER	coord: 1..183 score: 28.359
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 15..182

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig68707	contig	H-elongata_contig68707:744..2497 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig68707.14506.1	mRNA_H-elongata_contig68707.14506.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig68707 744..2497 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig68707.14506.1 ID=prot_H-elongata_contig68707.14506.1|Name=mRNA_H-elongata_contig68707.14506.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=184bp
DLPSPAAAATCCSRAKVWFPDSAYKTAQAINDFNRGENLPLMIFANWRGF
SGGTRDMYGEILKFGAQIVDALVNYKHPVFVYIPPNGELRGGAWVVIDPT
INEEVMEMYADVESRGGILEPPGICEVKFRAPDQMMKMHELDPILLGLDA
DLKVVGSEEDEQALKQQIKTREEVLFPMYLQVS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR034733	AcCoA_carboxyl
IPR011763	COA_CT_C
IPR029045	ClpP/crotonase-like_dom_sf